| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3746 |
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| Symbol | |
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| ID | 7388208 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 3109401 |
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| End bp | 3109766 |
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| Gene Length | 366 bp |
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| Protein Length | 121 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643652523 |
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| Product | chemotaxis response regulator |
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| Protein accession | YP_002550705 |
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| Protein GI | 222149748 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.193057 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTCAGA AAATACTTCT TGCCGAAGAT GACAACGACA TGCGCCGCTT CCTGGTGAAA
GCCCTGGAAA AGGCCGGATA CAAGGTATCC TCCTATGACA ATGGCGCCAG CGCCTATGAC
AGGCTTCGGG AAGAACCCTT CTCGCTGCTC CTGACCGACA TCGTCATGCC GGAAATGGAC
GGCATCGAGC TGGCCCGCCG CGCCACCGAA CTCGACCCGG ACCTCAAGGT GATGTTCATC
ACCGGCTTTG CCGCCGTGGC ATTGAACGCC GATTCCAAGG CGCCCAAGGA TGCCAAGGTC
CTGTCCAAGC CCTTCCACCT GCGCGACCTG GTAGACGAGG TCAACAAGCT GCTGACCGCC
GCCTGA
|
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| Protein sequence | MTQKILLAED DNDMRRFLVK ALEKAGYKVS SYDNGASAYD RLREEPFSLL LTDIVMPEMD
GIELARRATE LDPDLKVMFI TGFAAVALNA DSKAPKDAKV LSKPFHLRDL VDEVNKLLTA
A
|
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