| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0601 |
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| Symbol | |
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| ID | 5609899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 731730 |
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| End bp | 732527 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640931446 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_001472341 |
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| Protein GI | 157373741 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACAT TATTGCCTAG TGAACTTTCA ATACTTCTTG TCGAGCCTTC CGATACTCAG
AGAAAAATTA TCTGTAGCAG GCTAACTCAT GAAGGCATCT GCAATATTCA AACTGCAACG
AGTCTAACTG AAGCCCAAAC CATCATTAGT CGCCATCATC CTGATCTGGT TGCCAGTGCT
ATGCATTTCG AAGATGGCAC AGCATTAGAT CTGCTTAAAC AATTAAAAGA GACCAACGAG
TATAAAGACA TTCAATTTAT GTTGGTCTCC AGTGAATGCC GCCGTGAACA GCTAGAGGTT
TATAGACAGT CTGGCGTGGT ATCCATTCTT CCTAAGCCAT TCTCATCCGA ACACTTAGGT
AAAGCGCTCA ATGCCACCAT CGATCTCTTA AGCCAGGATG AGCTAGATCT CAGTCACTTC
GATGTACATA GCCTTAGAGT CCTGGTTGTC GATGACAGTA AGATGGCTCG AAAGATCATA
AGACGAACAA TTTCAAATTT AGGCCTTCAG TTGATCACCG AAGCAGTAGA TGGGGCTGAA
GCCATCGAAA TAATGAAATT GAATATGTTT GATTTAGTGA TCACAGATTA CAATATGCCC
AGTGTCGATG GCTTAGCCTT GACTCAATTT ATTCGTAACC ATAGTCAGCA ATCTCATATT
CCCATCCTTA TGGTGTCGTC TGAGGCCAAT GATGCTCATC TCAGCAATGT TTCCCAGGCA
GGCGTCAATG CCCTTTGCGA TAAACCCTTC GAACCTCAAC TTGTTAAGCA GATCCTCTAT
CAGTTGCTCG ATGAATGA
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| Protein sequence | MSTLLPSELS ILLVEPSDTQ RKIICSRLTH EGICNIQTAT SLTEAQTIIS RHHPDLVASA
MHFEDGTALD LLKQLKETNE YKDIQFMLVS SECRREQLEV YRQSGVVSIL PKPFSSEHLG
KALNATIDLL SQDELDLSHF DVHSLRVLVV DDSKMARKII RRTISNLGLQ LITEAVDGAE
AIEIMKLNMF DLVITDYNMP SVDGLALTQF IRNHSQQSHI PILMVSSEAN DAHLSNVSQA
GVNALCDKPF EPQLVKQILY QLLDE
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