| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2401 |
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| Symbol | |
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| ID | 5695249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 2892349 |
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| End bp | 2893698 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641265007 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_001530282 |
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| Protein GI | 158522412 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATATCGC ACATTGTCGT TGTTGACGAC GAACCCATCA CGCTCAAGCA GTTGCGGCGG
ATTCTTGAAA AAGAGGGCCA CCGGGTGTCG GCCTTTTCCA ATCCCCGTCG GGCACTGGAT
CATATCGAGA GCAATTCCTG CGATGTGCTG ATCAGCGACG TACGCATGCC CGCCATGGAC
GGTATGGAGC TGATGACCCG GGTCAAGGCC CGGTTCCCGG ATATCGAGGT GATCCTGATC
ACCGGGTACG CCTCCCTGGA CGGCGCCGTG GAGGCGGTTC GGGAGGGGGC GTTTCATTAC
CTGGAAAAGC CCTTTACCCC GGACCGGGTA AGGGAGCGGG TGGGCCAGGC CCTGCACCTG
CTTTCCGCCC GCCGGTCCGC CCGGCCAGGG GCCCAGGGGG AGGACCGGAA CGACGCCGGC
CCCGTTATTA TCGGCCAGGG GGCCCGGATT CGGGAGGTGG TTTCCATCAT CGGCCAGATC
GGGCCCACCG AATGCAATGT GCTCATCACC GGCGACTCGG GCAGCGGCAA GGAGCTGGTG
GCCCGGGCCA TTCACGCGGC CAGCCGCCGG TCTGCCGGAC CTTTTCTGGC CTTTAACTGC
GGCGCCTTGA GTGAAACCCT CATCGACAAC GAGCTGTTCG GCCACGAGAA GGGGGCCTTT
ACCGGCGCGG AGAGCAGGGG CATCGGCCTG GTGGAGGCGG CCTCCGGCGG CACCCTTTTC
CTTGACGAGA TCGGGGAGAT GCCCACCGCC ATGCAGGTGA AGCTGCTGCG GGTGCTTCAG
GAAGGAGAGC TGATGCGGGT GGGCGGCAGC CGGCCCGTTC CCGTGGACGT GCGTATCGTG
TCCGCCACGG CCGCGGACAT CAAGGCCGCG GTGGGTGAAG GCATCTTTCG CAAGGATCTC
TATTTCCGGA TCAACGTGGT CAACATCAAG CTGCCCGGCC TGGCCGAGCG CAGGGAGGAC
ATTCCCCTGC TGGCTTACCA CATTCTCAGC CGCCTTAACC GGCAGGGCGG GAAAAACATT
CAGGCCATAT CCGAAAAAGC CATGGCCCTG CTGTCCGGCT ACGCCTTTCC CGGAAACGTG
CGGGAGCTGG AAAATATTCT GGAGCGGGCC GTGGCGATCT GCCAGGGGGA GATAATCCGC
GAGTGCGATC TGCCCCCGGA CCTGGTGGCC CTGGAACTTC AGGCTTACAG ACCGCCGGAC
GAAACCTTCA TGACCCTGGC CGAACTGGAG CGGGACTATA TGGCCCACCT GTTGAAGATC
ACCGGCGGAG CACGGTCCCG TACCGCGGAA ATTCTGGGTA TTGACCGGGC GTCGCTGTGG
AGGAAGATGA AAAAATACGA CCTTGAGTAG
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| Protein sequence | MISHIVVVDD EPITLKQLRR ILEKEGHRVS AFSNPRRALD HIESNSCDVL ISDVRMPAMD
GMELMTRVKA RFPDIEVILI TGYASLDGAV EAVREGAFHY LEKPFTPDRV RERVGQALHL
LSARRSARPG AQGEDRNDAG PVIIGQGARI REVVSIIGQI GPTECNVLIT GDSGSGKELV
ARAIHAASRR SAGPFLAFNC GALSETLIDN ELFGHEKGAF TGAESRGIGL VEAASGGTLF
LDEIGEMPTA MQVKLLRVLQ EGELMRVGGS RPVPVDVRIV SATAADIKAA VGEGIFRKDL
YFRINVVNIK LPGLAERRED IPLLAYHILS RLNRQGGKNI QAISEKAMAL LSGYAFPGNV
RELENILERA VAICQGEIIR ECDLPPDLVA LELQAYRPPD ETFMTLAELE RDYMAHLLKI
TGGARSRTAE ILGIDRASLW RKMKKYDLE
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