Gene RPD_4356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_4356 
Symbol 
ID4024881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4820292 
End bp4820651 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content57% 
IMG OID637964566 
Productresponse regulator receiver 
Protein accessionYP_571474 
Protein GI91978815 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00220083 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAAGA TCCTCCTCGC CGAAGACGAT AACGACATGC GCCGTTTCCT GGTGAAGGCG 
CTGGAAAACG CCGGATTCCA GGTTTCCTCA TTCGACAATG GCATGTCGGC CTATCAGCGA
CTCCGCGAGG AGCCGTTCGA GATGCTGCTG ACCGACATCG TGATGCCGGA GATGGACGGA
ATCGAGCTGG CGCGCCGCGC CTCCGAGTTG GACCCGGACA TCAAGATCAT GTTCATCACC
GGTTTTGCGG CAGTTGCGCT GAATTCCGAT TCGGAAGCGC CGAAAAATGC CAAGGTCCTC
TCCAAGCCTG TGCATCTGCG TGAACTGGTC AGCGAAGTGA ATAAGATGTT GGCGGCGTAA
 
Protein sequence
MHKILLAEDD NDMRRFLVKA LENAGFQVSS FDNGMSAYQR LREEPFEMLL TDIVMPEMDG 
IELARRASEL DPDIKIMFIT GFAAVALNSD SEAPKNAKVL SKPVHLRELV SEVNKMLAA