Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3324 |
Symbol | |
ID | 5078099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 3872469 |
End bp | 3873266 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640500525 |
Product | response regulator receiver protein |
Protein accession | YP_001184835 |
Protein GI | 146294411 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTCATC TATCACCCAA CGAATTATCC ATTCTCTTAG TAGAGCCTTC GGATACGCAA CGCCGAATCA TTATTCAGCA TCTACAACAA GAAGGGATTG TCAGCATTCA AACGGCTGCA AATATCGAAG AGGCTAAAGC CGTGGTTGGC CGCCATAAAC CCGATCTCAT CGCCAGTGCA ATGCATTTCG AAGATGGCAC TGCCATCGAT CTACTCAGCT ATTTACGTGT AAATAGTGAC TACAAAGACA TTCAGTTTAT GTTGGTGTCG AGCGAATGCC GTCGCGAGCA ATTGGAGATT TTTAGACAAT CAGGCGTAGT CGCTATCTTA CCTAAGCCTT TCCATGCCGA GCACTTAGGT AAAGCCCTGA ACGCGACCAT CGATCTATTA AGCCATGATG AACTCGATCT TAGCCATTTT GATGTACATG ATGTGCGCGT TTTAGTAGTC GATGACAGTC GTATGGCGAG AAATGTCATC AAACGAACTA TTGGTAATTT AGGAATAAAG CTCATTACCG AAGCAGAAGA TGGCGCACAA GCTATTGAGT TAATGAGAAA TAATATGTTT GATCTGGTCA TTACTGACTA TAACATGCCC AGTATTGATG GATTAGCATT GACCCAATTT ATTCGCAACG AGAGCCAACA ATCCCATATC CCTATTTTAA TGGTCTCCTC AGAAGCCAAC GATACCCACT TAAGCAATGT ATCACAGGCA GGCGTCAATG CTCTGTGCGA TAAACCCTTC GAACCTCAAC TCGTCAAGCA GCTCTTATTT CAACTGTTAG AAGAATAA
|
Protein sequence | MSHLSPNELS ILLVEPSDTQ RRIIIQHLQQ EGIVSIQTAA NIEEAKAVVG RHKPDLIASA MHFEDGTAID LLSYLRVNSD YKDIQFMLVS SECRREQLEI FRQSGVVAIL PKPFHAEHLG KALNATIDLL SHDELDLSHF DVHDVRVLVV DDSRMARNVI KRTIGNLGIK LITEAEDGAQ AIELMRNNMF DLVITDYNMP SIDGLALTQF IRNESQQSHI PILMVSSEAN DTHLSNVSQA GVNALCDKPF EPQLVKQLLF QLLEE
|
| |