More than 300 homologs were found in PanDaTox collection
for query gene PC1_0380 on replicon NC_012917
Organism: Pectobacterium carotovorum subsp. carotovorum PC1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012912  Dd1591_3723  methyl-accepting chemotaxis sensory transducer  79.15 
 
 
539 aa  773    Dickeya zeae Ech1591  Bacteria  normal  0.359916  n/a   
 
 
-
 
NC_012880  Dd703_3560  methyl-accepting chemotaxis sensory transducer  76.67 
 
 
538 aa  765    Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_0380  methyl-accepting chemotaxis sensory transducer  100 
 
 
539 aa  1076    Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_0431  methyl-accepting chemotaxis sensory transducer  96.47 
 
 
539 aa  954    Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_3813  methyl-accepting chemotaxis sensory transducer  45.45 
 
 
617 aa  414  1e-114  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A0121  methyl-accepting chemotaxis sensory transducer  45.45 
 
 
618 aa  413  1e-114  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.487659 
 
 
-
 
NC_007510  Bcep18194_A3360  methyl-accepting chemotaxis sensory transducer  44.76 
 
 
655 aa  386  1e-106  Burkholderia sp. 383  Bacteria  normal  0.139099  normal 
 
 
-
 
NC_010551  BamMC406_0184  methyl-accepting chemotaxis sensory transducer  43.83 
 
 
648 aa  383  1e-105  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_0167  methyl-accepting chemotaxis sensory transducer  45.17 
 
 
659 aa  384  1e-105  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.677561 
 
 
-
 
NC_010622  Bphy_2972  methyl-accepting chemotaxis sensory transducer  44.49 
 
 
597 aa  383  1e-105  Burkholderia phymatum STM815  Bacteria  normal  hitchhiker  0.00113075 
 
 
-
 
NC_007434  BURPS1710b_0074  methyl-accepting chemotaxis protein I  43.99 
 
 
673 aa  379  1e-104  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_0171  methyl-accepting chemotaxis sensory transducer  44.44 
 
 
648 aa  381  1e-104  Burkholderia ambifaria AMMD  Bacteria  normal  0.451768  n/a   
 
 
-
 
NC_006348  BMA2857  methyl-accepting chemotaxis protein, putative  43.99 
 
 
673 aa  379  1e-103  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I3180  methyl-accepting chemotaxis protein, putative  44.19 
 
 
666 aa  377  1e-103  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008060  Bcen_2849  methyl-accepting chemotaxis sensory transducer  44.03 
 
 
659 aa  376  1e-103  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_0258  methyl-accepting chemotaxis sensory transducer  44.03 
 
 
659 aa  376  1e-103  Burkholderia cenocepacia HI2424  Bacteria  decreased coverage  0.00414638  n/a   
 
 
-
 
NC_009080  BMA10247_3118  putative methyl-accepting chemotaxis protein  43.99 
 
 
673 aa  379  1e-103  Burkholderia mallei NCTC 10247  Bacteria  normal  0.0285227  n/a   
 
 
-
 
NC_009076  BURPS1106A_3934  methyl-accepting chemotaxis protein  43.8 
 
 
673 aa  378  1e-103  Burkholderia pseudomallei 1106a  Bacteria  normal  0.3175  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3433  putative methyl-accepting chemotaxis protein  43.99 
 
 
673 aa  379  1e-103  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1686  putative methyl-accepting chemotaxis protein  43.99 
 
 
673 aa  379  1e-103  Burkholderia mallei NCTC 10229  Bacteria  normal  0.303273  n/a   
 
 
-
 
NC_009074  BURPS668_3853  methyl-accepting chemotaxis protein II  43.99 
 
 
671 aa  377  1e-103  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_0240  methyl-accepting chemotaxis sensory transducer  43.62 
 
 
657 aa  375  1e-102  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0244017  normal 
 
 
-
 
NC_010681  Bphyt_0620  methyl-accepting chemotaxis sensory transducer  43.02 
 
 
549 aa  359  6e-98  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.0437284 
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  43.35 
 
 
572 aa  357  3.9999999999999996e-97  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_012857  Rpic12D_4286  methyl-accepting chemotaxis sensory transducer  43.83 
 
 
522 aa  356  5.999999999999999e-97  Ralstonia pickettii 12D  Bacteria  normal  0.246906  normal  0.38481 
 
 
-
 
NC_010678  Rpic_4174  methyl-accepting chemotaxis sensory transducer  43.83 
 
 
522 aa  356  5.999999999999999e-97  Ralstonia pickettii 12J  Bacteria  normal  0.0753508  normal 
 
 
-
 
NC_010622  Bphy_0345  methyl-accepting chemotaxis sensory transducer  42.44 
 
 
547 aa  355  1e-96  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B5597  methyl-accepting chemotaxis sensory transducer  42.19 
 
 
570 aa  353  5e-96  Ralstonia eutropha JMP134  Bacteria  normal  0.253624  n/a   
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  41.81 
 
 
596 aa  350  3e-95  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_1600  methyl-accepting chemotaxis sensory transducer  41.38 
 
 
535 aa  349  9e-95  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A2023  methyl-accepting chemotaxis sensory transducer  40.15 
 
 
538 aa  345  1e-93  Burkholderia xenovorans LB400  Bacteria  normal  0.205381  normal 
 
 
-
 
NC_007951  Bxe_A4080  methyl-accepting chemotaxis sensory transducer  41.97 
 
 
549 aa  343  4e-93  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_2019  methyl-accepting chemotaxis sensory transducer  39.89 
 
 
567 aa  340  2.9999999999999998e-92  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_1408  methyl-accepting chemotaxis sensory transducer  44.04 
 
 
513 aa  338  9.999999999999999e-92  Ralstonia pickettii 12D  Bacteria  normal  0.0312904  normal  0.0311205 
 
 
-
 
NC_007951  Bxe_A2002  methyl-accepting chemotaxis sensory transducer  41.72 
 
 
601 aa  338  9.999999999999999e-92  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_2259  methyl-accepting chemotaxis sensory transducer  40.04 
 
 
588 aa  337  2.9999999999999997e-91  Burkholderia phytofirmans PsJN  Bacteria  normal  0.131825  normal  0.497854 
 
 
-
 
NC_009436  Ent638_3407  methyl-accepting chemotaxis sensory transducer  40.8 
 
 
545 aa  337  5e-91  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_2245  methyl-accepting chemotaxis sensory transducer  39.58 
 
 
524 aa  336  5e-91  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc1460  methyl-accepting chemotaxis transducer transmembrane protein  42.33 
 
 
513 aa  335  1e-90  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.75608 
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  50 
 
 
559 aa  333  6e-90  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_1514  methyl-accepting chemotaxis sensory transducer  40.95 
 
 
562 aa  332  7.000000000000001e-90  Dickeya dadantii Ech703  Bacteria  normal  0.957025  n/a   
 
 
-
 
NC_003296  RSp1406  methyl-accepting chemotaxis I  42.15 
 
 
608 aa  332  1e-89  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.13211 
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  45.22 
 
 
566 aa  331  3e-89  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_007651  BTH_I2470  methyl-accepting chemotaxis protein  41.94 
 
 
616 aa  330  4e-89  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_3678  methyl-accepting chemotaxis sensory transducer  42.46 
 
 
605 aa  330  5.0000000000000004e-89  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.12372 
 
 
-
 
NC_010622  Bphy_1232  methyl-accepting chemotaxis sensory transducer  42.66 
 
 
595 aa  328  2.0000000000000001e-88  Burkholderia phymatum STM815  Bacteria  normal  0.0384777  normal  0.175298 
 
 
-
 
NC_009832  Spro_2982  methyl-accepting chemotaxis sensory transducer  42.31 
 
 
541 aa  327  3e-88  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_010159  YpAngola_A3516  methyl-accepting chemotaxis protein  41.43 
 
 
557 aa  326  5e-88  Yersinia pestis Angola  Bacteria  normal  normal  0.698348 
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  58.15 
 
 
559 aa  324  3e-87  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_007434  BURPS1710b_2024  methyl-accepting chemotaxis protein I  42.44 
 
 
634 aa  324  3e-87  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_2983  methyl-accepting chemotaxis sensory transducer  42.69 
 
 
556 aa  323  7e-87  Serratia proteamaculans 568  Bacteria  normal  0.96835  normal 
 
 
-
 
NC_009076  BURPS1106A_1872  methyl-accepting chemotaxis protein  42.44 
 
 
626 aa  323  7e-87  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3517  methyl-accepting chemotaxis protein  40.48 
 
 
536 aa  322  8e-87  Yersinia pestis Angola  Bacteria  normal  normal  0.549342 
 
 
-
 
NC_010508  Bcenmc03_1588  methyl-accepting chemotaxis sensory transducer  42.72 
 
 
588 aa  322  8e-87  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.834305  normal 
 
 
-
 
NC_009708  YpsIP31758_1643  methyl-accepting chemotaxis protein  40.48 
 
 
536 aa  322  8e-87  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_012857  Rpic12D_4162  methyl-accepting chemotaxis sensory transducer  42.08 
 
 
615 aa  322  9.000000000000001e-87  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4050  methyl-accepting chemotaxis sensory transducer  42.08 
 
 
615 aa  322  9.000000000000001e-87  Ralstonia pickettii 12J  Bacteria  normal  0.996584  normal 
 
 
-
 
NC_003296  RSp0303  methyl-accepting chemotaxis transmembrane protein  39.66 
 
 
515 aa  322  9.999999999999999e-87  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.0248188 
 
 
-
 
NC_010465  YPK_1753  methyl-accepting chemotaxis sensory transducer  41.43 
 
 
557 aa  321  1.9999999999999998e-86  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1642  methyl-accepting chemotaxis protein  41.43 
 
 
557 aa  321  1.9999999999999998e-86  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_1859  methyl-accepting chemotaxis protein  42.25 
 
 
621 aa  321  1.9999999999999998e-86  Burkholderia pseudomallei 668  Bacteria  normal  0.674726  n/a   
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  52.4 
 
 
583 aa  320  3.9999999999999996e-86  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_011083  SeHA_C4939  methyl-accepting chemotaxis protein I  47.41 
 
 
553 aa  320  3.9999999999999996e-86  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.188217  normal 
 
 
-
 
NC_011080  SNSL254_A4887  methyl-accepting chemotaxis protein I  47.41 
 
 
553 aa  320  3.9999999999999996e-86  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_003296  RS03153  putative methyl-accepting chemotaxis transducer transmembrane protein  43.6 
 
 
524 aa  320  6e-86  Ralstonia solanacearum GMI1000  Bacteria  normal  0.471775  normal  0.0817308 
 
 
-
 
NC_009436  Ent638_0513  methyl-accepting chemotaxis sensory transducer  41.37 
 
 
586 aa  320  6e-86  Enterobacter sp. 638  Bacteria  normal  hitchhiker  0.00498581 
 
 
-
 
NC_009436  Ent638_2456  methyl-accepting protein IV  50.68 
 
 
533 aa  320  6e-86  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A4946  methyl-accepting chemotaxis protein I  47.74 
 
 
553 aa  318  1e-85  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.556415 
 
 
-
 
CP001509  ECD_04232  methyl-accepting chemotaxis protein I, serine sensor receptor  40.15 
 
 
551 aa  317  2e-85  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A4786  methyl-accepting chemotaxis protein I  43.26 
 
 
553 aa  318  2e-85  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.709187  normal 
 
 
-
 
NC_012892  B21_04198  hypothetical protein  40.15 
 
 
551 aa  317  2e-85  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_3642  methyl-accepting chemotaxis sensory transducer  39.96 
 
 
551 aa  317  3e-85  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_003296  RSp0507  methyl-accepting chemotaxis I  41.48 
 
 
600 aa  317  3e-85  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_3610  methyl-accepting chemotaxis sensory transducer  40.42 
 
 
511 aa  316  6e-85  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_1857  methyl-accepting chemotaxis sensory transducer  41.15 
 
 
561 aa  316  9e-85  Pectobacterium wasabiae WPP163  Bacteria  normal  0.769355  n/a   
 
 
-
 
NC_012912  Dd1591_1453  methyl-accepting chemotaxis sensory transducer  39.39 
 
 
532 aa  315  9e-85  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B2952  methyl-accepting chemotaxis sensory transducer  40.64 
 
 
540 aa  315  9.999999999999999e-85  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_1879  methyl-accepting chemotaxis sensory transducer  50.3 
 
 
661 aa  315  9.999999999999999e-85  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_0996  methyl-accepting chemotaxis sensory transducer  41.75 
 
 
601 aa  315  1.9999999999999998e-84  Ralstonia pickettii 12J  Bacteria  normal  0.947036  normal  0.198959 
 
 
-
 
NC_010676  Bphyt_6908  methyl-accepting chemotaxis sensory transducer  39.78 
 
 
540 aa  315  1.9999999999999998e-84  Burkholderia phytofirmans PsJN  Bacteria  normal  0.740725  normal  0.573307 
 
 
-
 
NC_010625  Bphy_5591  methyl-accepting chemotaxis sensory transducer  41.4 
 
 
519 aa  315  1.9999999999999998e-84  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_1480  methyl-accepting chemotaxis sensory transducer  40.19 
 
 
537 aa  314  1.9999999999999998e-84  Rhodoferax ferrireducens T118  Bacteria  normal  0.201713  n/a   
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  47.55 
 
 
569 aa  315  1.9999999999999998e-84  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007953  Bxe_C0847  methyl-accepting chemotaxis sensory transducer  39.35 
 
 
516 aa  315  1.9999999999999998e-84  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.024141 
 
 
-
 
NC_010658  SbBS512_E4893  methyl-accepting chemotaxis protein I  39.96 
 
 
551 aa  314  1.9999999999999998e-84  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_4947  methyl-accepting chemotaxis protein I  40.29 
 
 
554 aa  315  1.9999999999999998e-84  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_2287  methyl-accepting chemotaxis sensory transducer  42.5 
 
 
529 aa  315  1.9999999999999998e-84  Burkholderia phymatum STM815  Bacteria  normal  normal  0.772452 
 
 
-
 
NC_009436  Ent638_2457  methyl-accepting chemotaxis sensory transducer  40.64 
 
 
555 aa  314  2.9999999999999996e-84  Enterobacter sp. 638  Bacteria  normal  0.890786  normal 
 
 
-
 
NC_009708  YpsIP31758_1631  methyl-accepting chemotaxis protein  40.74 
 
 
579 aa  314  2.9999999999999996e-84  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_1742  methyl-accepting chemotaxis sensory transducer  40.23 
 
 
579 aa  314  2.9999999999999996e-84  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C2134  methyl-accepting chemotaxis protein II  41.15 
 
 
553 aa  314  2.9999999999999996e-84  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  hitchhiker  1.16019e-17 
 
 
-
 
NC_008060  Bcen_1131  methyl-accepting chemotaxis sensory transducer  41.62 
 
 
588 aa  314  2.9999999999999996e-84  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_1611  methyl-accepting chemotaxis sensory transducer  41.62 
 
 
588 aa  314  2.9999999999999996e-84  Burkholderia cenocepacia HI2424  Bacteria  normal  0.542582  n/a   
 
 
-
 
NC_010468  EcolC_3700  methyl-accepting chemotaxis sensory transducer  40.11 
 
 
554 aa  313  3.9999999999999997e-84  Escherichia coli ATCC 8739  Bacteria  normal  normal  0.125609 
 
 
-
 
NC_010551  BamMC406_1527  methyl-accepting chemotaxis sensory transducer  42.97 
 
 
587 aa  313  3.9999999999999997e-84  Burkholderia ambifaria MC40-6  Bacteria  normal  0.512784  normal  0.576949 
 
 
-
 
NC_011353  ECH74115_5868  methyl-accepting chemotaxis protein I  40.11 
 
 
554 aa  313  5.999999999999999e-84  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_1806  methyl-accepting chemotaxis sensory transducer  48.74 
 
 
652 aa  313  5.999999999999999e-84  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A1326  methyl-accepting chemotaxis protein II  41.15 
 
 
553 aa  313  6.999999999999999e-84  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.452066  hitchhiker  2.3261e-17 
 
 
-
 
NC_013421  Pecwa_3873  methyl-accepting chemotaxis sensory transducer  42.2 
 
 
575 aa  313  6.999999999999999e-84  Pectobacterium wasabiae WPP163  Bacteria  normal  0.460221  n/a   
 
 
-
 
NC_010498  EcSMS35_4900  methyl-accepting chemotaxis protein I  40.11 
 
 
554 aa  313  6.999999999999999e-84  Escherichia coli SMS-3-5  Bacteria  normal  normal  0.979291 
 
 
-
 
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