More than 300 homologs were found in PanDaTox collection
for query gene GM21_3968 on replicon NC_012918
Organism: Geobacter sp. M21



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011146  Gbem_3880  methyl-accepting chemotaxis sensory transducer  95.28 
 
 
509 aa  969    Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3968  methyl-accepting chemotaxis sensory transducer  100 
 
 
509 aa  1017    Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00000000439597 
 
 
-
 
NC_010814  Glov_1557  methyl-accepting chemotaxis sensory transducer  54.69 
 
 
526 aa  537  1e-151  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_3324  methyl-accepting chemotaxis sensory transducer  47.25 
 
 
534 aa  460  9.999999999999999e-129  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU2423  methyl-accepting chemotaxis protein, putative  46.32 
 
 
533 aa  458  1e-127  Geobacter sulfurreducens PCA  Bacteria  normal  0.494868  n/a   
 
 
-
 
NC_011145  AnaeK_2483  methyl-accepting chemotaxis sensory transducer  37.13 
 
 
905 aa  192  1e-47  Anaeromyxobacter sp. K  Bacteria  normal  0.611307  n/a   
 
 
-
 
NC_011891  A2cp1_2579  methyl-accepting chemotaxis sensory transducer  36.53 
 
 
905 aa  189  1e-46  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_0326  methyl-accepting chemotaxis sensory transducer  38.39 
 
 
693 aa  188  2e-46  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.776731  n/a   
 
 
-
 
NC_011891  A2cp1_0369  methyl-accepting chemotaxis sensory transducer  38.41 
 
 
725 aa  183  6e-45  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_0356  methyl-accepting chemotaxis sensory transducer  38.41 
 
 
725 aa  183  7e-45  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1374  methyl-accepting chemotaxis sensory transducer  35.93 
 
 
908 aa  182  1e-44  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_3278  methyl-accepting chemotaxis sensory transducer  31.87 
 
 
880 aa  161  2e-38  Anaeromyxobacter sp. K  Bacteria  normal  0.0350486  n/a   
 
 
-
 
NC_007760  Adeh_3162  methyl-accepting chemotaxis sensory transducer  32.97 
 
 
569 aa  152  2e-35  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_007796  Mhun_0008  methyl-accepting chemotaxis sensory transducer  26.76 
 
 
519 aa  145  1e-33  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_007796  Mhun_0016  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  23.59 
 
 
1009 aa  145  1e-33  Methanospirillum hungatei JF-1  Archaea  normal  0.0724205  normal 
 
 
-
 
NC_009012  Cthe_3030  methyl-accepting chemotaxis sensory transducer  34.38 
 
 
832 aa  138  2e-31  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00284544  n/a   
 
 
-
 
NC_011832  Mpal_1710  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  25.05 
 
 
1355 aa  134  3e-30  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_010814  Glov_1735  methyl-accepting chemotaxis sensory transducer  34.83 
 
 
868 aa  131  3e-29  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_3799  methyl-accepting chemotaxis sensory transducer  27.29 
 
 
772 aa  131  3e-29  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007796  Mhun_0951  methyl-accepting chemotaxis sensory transducer  25 
 
 
1332 aa  130  8.000000000000001e-29  Methanospirillum hungatei JF-1  Archaea  normal  0.514754  normal  0.661078 
 
 
-
 
NC_011832  Mpal_1775  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  25.51 
 
 
937 aa  128  3e-28  Methanosphaerula palustris E1-9c  Archaea  normal  0.303689  normal 
 
 
-
 
NC_007796  Mhun_0990  methyl-accepting chemotaxis sensory transducer  24.86 
 
 
824 aa  128  3e-28  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.256608 
 
 
-
 
NC_010814  Glov_1733  methyl-accepting chemotaxis sensory transducer  34.83 
 
 
823 aa  126  7e-28  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_0613  methyl-accepting chemotaxis sensory transducer  26.29 
 
 
759 aa  120  3.9999999999999996e-26  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.194714 
 
 
-
 
NC_009012  Cthe_0298  methyl-accepting chemotaxis sensory transducer  29.7 
 
 
600 aa  120  6e-26  Clostridium thermocellum ATCC 27405  Bacteria  unclonable  0.000000337227  n/a   
 
 
-
 
NC_012918  GM21_2772  methyl-accepting chemotaxis sensory transducer  28.46 
 
 
735 aa  120  7.999999999999999e-26  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009712  Mboo_1248  methyl-accepting chemotaxis sensory transducer  32.97 
 
 
981 aa  119  9.999999999999999e-26  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.206477  normal 
 
 
-
 
NC_011146  Gbem_1482  methyl-accepting chemotaxis sensory transducer  27.91 
 
 
735 aa  118  3e-25  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007796  Mhun_0010  putative PAS/PAC sensor protein  32.09 
 
 
750 aa  117  3.9999999999999997e-25  Methanospirillum hungatei JF-1  Archaea  normal  0.0248614  normal 
 
 
-
 
NC_007796  Mhun_1406  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.91 
 
 
1091 aa  116  7.999999999999999e-25  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.199653 
 
 
-
 
NC_012918  GM21_1280  methyl-accepting chemotaxis sensory transducer  29.05 
 
 
1048 aa  114  4.0000000000000004e-24  Geobacter sp. M21  Bacteria  n/a    normal  0.0818053 
 
 
-
 
NC_011146  Gbem_2942  methyl-accepting chemotaxis sensory transducer  23.29 
 
 
1049 aa  114  5e-24  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1294  methyl-accepting chemotaxis sensory transducer  27.53 
 
 
686 aa  113  8.000000000000001e-24  Geobacter sp. M21  Bacteria  n/a    hitchhiker  4.66893e-19 
 
 
-
 
NC_011071  Smal_3007  methyl-accepting chemotaxis sensory transducer  25.21 
 
 
707 aa  112  1.0000000000000001e-23  Stenotrophomonas maltophilia R551-3  Bacteria  normal  decreased coverage  0.00177393 
 
 
-
 
NC_007517  Gmet_2423  methyl-accepting chemotaxis sensory transducer  28.3 
 
 
740 aa  108  2e-22  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_007796  Mhun_2975  methyl-accepting chemotaxis sensory transducer  24.52 
 
 
758 aa  108  3e-22  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_011071  Smal_1169  methyl-accepting chemotaxis sensory transducer  25.52 
 
 
740 aa  105  2e-21  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_00043  chemotaxis protein  25.7 
 
 
705 aa  103  6e-21  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.51691  n/a   
 
 
-
 
NC_011071  Smal_1846  methyl-accepting chemotaxis sensory transducer  25.76 
 
 
755 aa  102  2e-20  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.422723  normal  0.381468 
 
 
-
 
NC_011832  Mpal_2633  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  31.71 
 
 
806 aa  99.8  1e-19  Methanosphaerula palustris E1-9c  Archaea  normal  0.0337434  hitchhiker  0.00302183 
 
 
-
 
NC_007520  Tcr_1897  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  27.72 
 
 
1170 aa  99.8  1e-19  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_3947  methyl-accepting chemotaxis protein  28.06 
 
 
619 aa  99.4  1e-19  Agrobacterium vitis S4  Bacteria  normal  0.412994  n/a   
 
 
-
 
NC_011832  Mpal_2271  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  24.64 
 
 
1104 aa  97.8  4e-19  Methanosphaerula palustris E1-9c  Archaea  normal  0.292314  normal 
 
 
-
 
NC_010717  PXO_00041  chemotaxis protein  27 
 
 
752 aa  97.8  4e-19  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.292066  n/a   
 
 
-
 
NC_011071  Smal_1847  methyl-accepting chemotaxis sensory transducer  29.1 
 
 
793 aa  97.1  7e-19  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.143361  normal  0.380239 
 
 
-
 
NC_007520  Tcr_0574  methyl-accepting chemotaxis sensory transducer  24.47 
 
 
815 aa  96.3  1e-18  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_011832  Mpal_1068  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  24.76 
 
 
885 aa  95.9  2e-18  Methanosphaerula palustris E1-9c  Archaea  normal  normal  0.122951 
 
 
-
 
NC_008609  Ppro_2710  methyl-accepting chemotaxis sensory transducer  26.16 
 
 
969 aa  95.5  2e-18  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0151  methyl-accepting chemotaxis protein  29 
 
 
678 aa  95.5  2e-18  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011832  Mpal_1707  methyl-accepting chemotaxis sensory transducer  31.71 
 
 
1016 aa  95.1  2e-18  Methanosphaerula palustris E1-9c  Archaea  normal  0.569761  normal 
 
 
-
 
NC_011071  Smal_1851  methyl-accepting chemotaxis sensory transducer  25.48 
 
 
745 aa  94.4  4e-18  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.195185 
 
 
-
 
NC_007796  Mhun_0495  methyl-accepting chemotaxis sensory transducer  25.17 
 
 
795 aa  94  6e-18  Methanospirillum hungatei JF-1  Archaea  normal  0.132321  normal 
 
 
-
 
NC_008312  Tery_4229  methyl-accepting chemotaxis sensory transducer  25.6 
 
 
1150 aa  94  6e-18  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.591053 
 
 
-
 
NC_011071  Smal_3896  methyl-accepting chemotaxis sensory transducer  26.22 
 
 
706 aa  93.6  7e-18  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.337027  normal  0.882129 
 
 
-
 
NC_010717  PXO_00046  chemotaxis protein  26.07 
 
 
753 aa  93.6  8e-18  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00054  methyl-accepting chemotaxis protein  26.08 
 
 
797 aa  92.4  1e-17  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.276697  n/a   
 
 
-
 
NC_011071  Smal_3993  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  31.05 
 
 
701 aa  93.2  1e-17  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.311816 
 
 
-
 
NC_002939  GSU1140  methyl-accepting chemotaxis protein  28.74 
 
 
727 aa  92  2e-17  Geobacter sulfurreducens PCA  Bacteria  normal  0.664897  n/a   
 
 
-
 
NC_007974  Rmet_3678  methyl-accepting chemotaxis sensory transducer  30.73 
 
 
605 aa  91.7  3e-17  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.12372 
 
 
-
 
NC_002939  GSU1294  methyl-accepting chemotaxis protein  24.44 
 
 
962 aa  90.5  7e-17  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011365  Gdia_3464  methyl-accepting chemotaxis sensory transducer  31 
 
 
498 aa  90.1  9e-17  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal  0.0751949 
 
 
-
 
NC_007298  Daro_0728  histidine kinase, HAMP region: chemotaxis sensory transducer  27.05 
 
 
792 aa  89.7  1e-16  Dechloromonas aromatica RCB  Bacteria  normal  0.066629  normal 
 
 
-
 
NC_012917  PC1_3412  methyl-accepting chemotaxis sensory transducer  32.02 
 
 
528 aa  89.7  1e-16  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0936318  n/a   
 
 
-
 
NC_008609  Ppro_1601  methyl-accepting chemotaxis sensory transducer  24.88 
 
 
1500 aa  89.7  1e-16  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00039  chemotaxis protein  28.27 
 
 
775 aa  88.6  2e-16  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.371493  n/a   
 
 
-
 
NC_007796  Mhun_0331  methyl-accepting chemotaxis sensory transducer  25.7 
 
 
701 aa  89.4  2e-16  Methanospirillum hungatei JF-1  Archaea  normal  0.0634228  normal 
 
 
-
 
NC_007963  Csal_2022  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  27.05 
 
 
748 aa  89  2e-16  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_010625  Bphy_5591  methyl-accepting chemotaxis sensory transducer  30.71 
 
 
519 aa  89.4  2e-16  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_3537  methyl-accepting chemotaxis sensory transducer  24.78 
 
 
843 aa  89  2e-16  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_007520  Tcr_1984  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  26.06 
 
 
954 aa  87.8  4e-16  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_02220  putative chemotaxis transducer  26.14 
 
 
679 aa  87.8  4e-16  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.329962  normal 
 
 
-
 
NC_007952  Bxe_B2520  methyl-accepting chemotaxis sensory transducer  33.65 
 
 
542 aa  87.4  6e-16  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.128174 
 
 
-
 
NC_008789  Hhal_2163  methyl-accepting chemotaxis sensory transducer  28.44 
 
 
610 aa  86.7  9e-16  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_007796  Mhun_1422  methyl-accepting chemotaxis sensory transducer  26.94 
 
 
704 aa  86.3  0.000000000000001  Methanospirillum hungatei JF-1  Archaea  normal  0.215131  normal  0.131474 
 
 
-
 
NC_009051  Memar_0239  methyl-accepting chemotaxis sensory transducer  26.58 
 
 
793 aa  85.9  0.000000000000001  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_012857  Rpic12D_4286  methyl-accepting chemotaxis sensory transducer  30.43 
 
 
522 aa  85.5  0.000000000000002  Ralstonia pickettii 12D  Bacteria  normal  0.246906  normal  0.38481 
 
 
-
 
NC_010678  Rpic_4174  methyl-accepting chemotaxis sensory transducer  30.43 
 
 
522 aa  85.5  0.000000000000002  Ralstonia pickettii 12J  Bacteria  normal  0.0753508  normal 
 
 
-
 
NC_008009  Acid345_1526  methyl-accepting chemotaxis sensory transducer  23.68 
 
 
858 aa  85.1  0.000000000000002  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.787952  normal  0.35844 
 
 
-
 
NC_007348  Reut_B5597  methyl-accepting chemotaxis sensory transducer  28.34 
 
 
570 aa  85.1  0.000000000000003  Ralstonia eutropha JMP134  Bacteria  normal  0.253624  n/a   
 
 
-
 
NC_009656  PSPA7_0256  chemotaxis transducer  25.73 
 
 
679 aa  85.1  0.000000000000003  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_2091  methyl-accepting chemotaxis sensory transducer  27.46 
 
 
656 aa  85.1  0.000000000000003  Shewanella sp. MR-4  Bacteria  normal  normal  0.684691 
 
 
-
 
NC_008322  Shewmr7_1883  methyl-accepting chemotaxis sensory transducer  27.46 
 
 
656 aa  85.1  0.000000000000003  Shewanella sp. MR-7  Bacteria  normal  normal  0.113479 
 
 
-
 
NC_008577  Shewana3_2216  methyl-accepting chemotaxis sensory transducer  27.46 
 
 
657 aa  85.1  0.000000000000003  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_2608  methyl-accepting chemotaxis protein  28.36 
 
 
655 aa  84.3  0.000000000000005  Agrobacterium vitis S4  Bacteria  normal  0.445883  n/a   
 
 
-
 
NC_004347  SO_2123  methyl-accepting chemotaxis protein  27.83 
 
 
654 aa  84  0.000000000000006  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_012918  GM21_1108  methyl-accepting chemotaxis sensory transducer  28.54 
 
 
685 aa  84  0.000000000000006  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_010717  PXO_00047  chemotaxis protein  24.17 
 
 
733 aa  83.6  0.000000000000007  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_3571  methyl-accepting chemotaxis sensory transducer  31.03 
 
 
528 aa  83.6  0.000000000000007  Pectobacterium wasabiae WPP163  Bacteria  normal  0.595797  n/a   
 
 
-
 
NC_007796  Mhun_1844  methyl-accepting chemotaxis sensory transducer  22.44 
 
 
719 aa  83.6  0.000000000000009  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.535105 
 
 
-
 
NC_013223  Dret_0342  methyl-accepting chemotaxis sensory transducer  34.12 
 
 
699 aa  83.2  0.00000000000001  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_2537  methyl-accepting chemotaxis sensory transducer  29.33 
 
 
508 aa  82.8  0.00000000000001  Pectobacterium wasabiae WPP163  Bacteria  normal  0.616273  n/a   
 
 
-
 
NC_007520  Tcr_0553  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  28.45 
 
 
888 aa  82.8  0.00000000000001  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_0727  methyl-accepting chemotaxis sensory transducer  30.33 
 
 
559 aa  82.8  0.00000000000001  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_1569  methyl-accepting chemotaxis sensory transducer  28.43 
 
 
554 aa  83.2  0.00000000000001  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A2663  methyl-accepting chemotaxis sensory transducer  30.81 
 
 
520 aa  83.2  0.00000000000001  Methylibium petroleiphilum PM1  Bacteria  normal  0.0198398  normal 
 
 
-
 
NC_008825  Mpe_A0335  methyl-accepting chemotaxis protein I  30 
 
 
394 aa  82  0.00000000000002  Methylibium petroleiphilum PM1  Bacteria  normal  0.809135  normal  0.684623 
 
 
-
 
NC_007298  Daro_0729  PAS  25.82 
 
 
945 aa  82.4  0.00000000000002  Dechloromonas aromatica RCB  Bacteria  normal  0.0635035  normal 
 
 
-
 
NC_013223  Dret_1009  methyl-accepting chemotaxis sensory transducer with Cache sensor  36.36 
 
 
569 aa  82.8  0.00000000000002  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.103849  normal  0.0253995 
 
 
-
 
NC_007796  Mhun_1648  methyl-accepting chemotaxis sensory transducer  23.67 
 
 
801 aa  82.4  0.00000000000002  Methanospirillum hungatei JF-1  Archaea  normal  0.222536  normal 
 
 
-
 
NC_012880  Dd703_0786  methyl-accepting chemotaxis sensory transducer  29.35 
 
 
529 aa  81.6  0.00000000000003  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
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