| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2633 |
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| Symbol | |
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| ID | 7272455 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 2760855 |
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| End bp | 2763275 |
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| Gene Length | 2421 bp |
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| Protein Length | 806 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643571228 |
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| Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
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| Protein accession | YP_002467624 |
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| Protein GI | 219853192 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0337434 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00302183 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATCTTG AACAATGTAC AAAAGATCTT GAAATAGCCA AGAAAATGGC AGGGCAGTTT
GAGTTACTCT CTACAGGGAT CAACCAGTTG CCGGTCCCGA TTCACATCAT CGATACCACG
TACACAATCC TCTATACAAA TGAGGCTGCT GCAGGTATCG TAGGCAAGAG AAGAGAAGAG
GTCATCGGCA AGAAGTGCTT CGATCTGTAC AGGTCCTCGG CCTGCAACAC CCCCGAATGC
CCGTGCAGGG TTGCAATGGA GAAAGGGATC CCTTATCACA CCGAGATCCC GCTGGGTGAG
ACTATAATCG ACGGAACCGG ATTGCCTTTG AAAGACAGTG CCGGCACAAT AATTGGTGCG
ATCGAGTACT TCCCAGATGT AACCGAACAG AAGAAAGCCG TCACCGATAT TCTCTGGGTC
GCCGAACAGG CAGAGAATGG GGTTCTCTCC GCACGGACCG ACCCATCACA GCATACCGGG
GACTTTCAGA AGATGGCAGT AGGTATCAAT GGGATCCTCG ATGCAGTCAT CGGACCATTG
AATATCGCTG CTGACTTTGT CGCCAAGATC AGCGCAGGGA TGGCACCTGA AAAGATCACT
GCGAATTATC AGGGTGACTT CAATGTTCTG ATGCATAACC TGAATCAGCA GATCGATGTG
ATTGTGATGC GGAATACTGA ACTTGATATG CTGATAGAGG CTGCAATCGA GGGTAAACTC
ACAACACGCG CCGATCCTTC CAAGTTCCAG GGCGGTAACA AAAAGATGAT GGAGGGTGTC
AATGCGATGC TCGATGCCAT CATCGCTCCG TTAAATGTTG CCATAGATTA TTATAATAAA
ATCGGTATTG GCGACATTCC GGAGAAGAGA ACCAACAAGG TGAACGGCGA CATCATCGAG
ATGCAGAGGA GCATCAACAA CTGTATCGAC AACATCAATG CACTCGTCAC TGATGCCAAT
ATGCTCTCGG TAGCGGCAGT CGAAGGAAAA CTCGCGACTA GGGCGGACGC AACCAAACAC
CAGGGTGACT ACAGGAAGAT CATCGAAGGG TTCAACCAGA CCCTCGACGC TGTTATCACA
CCATTGAATC TGGCTGCAGA ATGCATTGAT CGGATCAGTA AAGGTGATAT CCCAGATAAG
ACAAATCGTC AGCTCAATGG TGACTTCAAC ACGCTTCACA TCAACCTGAA CAACCTCATC
GACAATATCA ATGCGCTCGT CACCGATGCT AATTTGCTCG CAGAGGCCGC CATAGAGGGA
AAACTCGCCA ACAGAGCGGA TACAACCAGA CACCTGGGCG ATTACAAAAA GGTCATAGGG
GGATTCAACA GAACGCTCGA TTCTGTGACC GAGCCGGTCA ATGAGGCGAT GCGGGTCTCG
AACGAGTTTG CCAAGTACAA CTTCACCGCC AGGGTCGACA AGAACCTGAA GGTTGCCGGC
GACTTCATCG CGTTCAAGGA TGCCCTGGAC GGGATCGGAA TCTCCATCTC CACAGCAATG
AAGGGGATCA GCGTCCAGAT GACCGACCTC GCAGCCTCGG CAGAGGAGGC GAACGCCAGC
GTCGAGGAGG TGGTCTCCGG GGCACAGCAG GTCGCCGGCA GCACCGGCAA GGTCAGTTCC
AACGCAGAGT TGGGAAACCA TGGGCTCGAA CAGGTGCTGA AGGCGATGGA GGATCTCTCT
GCCGCAGTCG AGGAGGTGAC CGCCAGCACC GAGTCCGTCG CCACCCTCGC CAATAATGCA
AATACGATCT CCAAGGATGG AGCGGAACTC GCACGAAAGG CCGAGCAGGG GATGGTCGGG
ATCACCCGCT CTACCAATGA GGTCGACCAG ATCATCGGCG AGATCAAGTC AGAAATGCAG
ATGATCGGCA AGATTGTCGG CCTGATCTCG GACCTGGCCA ACCAGACGAA CCTGCTCGCC
CTGAACGCAG CCATCGAGGC CGCCCGGGCC GGCGATGCAG GACGTGGTTT TGCGGTGGTC
GCAGCCGAGG TGAAGTCCCT GGCCCAGGAG TCCAGGACCT CGGCAGAGTC GATCGCCGAT
ATGATCGGGG GACTTCAGCA CAAGTCCGAA CTGGCCGCAA AGGCGACCGC GTCAGCGTCA
AAGGAGGTCG GGGTGGGGTC GGCAGTTCTC TCCGAGACCC TGAACGTCTT CAACAGGATC
GTTGCCGATG TCGAGAAGAT CACCCGCTCG GTTGAAGAGG TCGCGAGCGC CTCCGAAGAG
CAGGCTGCCA CCGTCGAGGA GATCACGGCC AGTGTCCACG AGGTGAGTTC CCTGGTGGAC
GGGACAGCCA GTGAGGCGGG CGATGCGGCT GCAGCCAGCG AGGAGACATC AGCCGCGATC
GATGAAGTCG GGAAGATCAT CGAGAACGTG AATGTGATCG TCGATAAAGT CTCAAGAGAG
ATCAGTATAT TCAGAGTCTG A
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| Protein sequence | MDLEQCTKDL EIAKKMAGQF ELLSTGINQL PVPIHIIDTT YTILYTNEAA AGIVGKRREE
VIGKKCFDLY RSSACNTPEC PCRVAMEKGI PYHTEIPLGE TIIDGTGLPL KDSAGTIIGA
IEYFPDVTEQ KKAVTDILWV AEQAENGVLS ARTDPSQHTG DFQKMAVGIN GILDAVIGPL
NIAADFVAKI SAGMAPEKIT ANYQGDFNVL MHNLNQQIDV IVMRNTELDM LIEAAIEGKL
TTRADPSKFQ GGNKKMMEGV NAMLDAIIAP LNVAIDYYNK IGIGDIPEKR TNKVNGDIIE
MQRSINNCID NINALVTDAN MLSVAAVEGK LATRADATKH QGDYRKIIEG FNQTLDAVIT
PLNLAAECID RISKGDIPDK TNRQLNGDFN TLHINLNNLI DNINALVTDA NLLAEAAIEG
KLANRADTTR HLGDYKKVIG GFNRTLDSVT EPVNEAMRVS NEFAKYNFTA RVDKNLKVAG
DFIAFKDALD GIGISISTAM KGISVQMTDL AASAEEANAS VEEVVSGAQQ VAGSTGKVSS
NAELGNHGLE QVLKAMEDLS AAVEEVTAST ESVATLANNA NTISKDGAEL ARKAEQGMVG
ITRSTNEVDQ IIGEIKSEMQ MIGKIVGLIS DLANQTNLLA LNAAIEAARA GDAGRGFAVV
AAEVKSLAQE SRTSAESIAD MIGGLQHKSE LAAKATASAS KEVGVGSAVL SETLNVFNRI
VADVEKITRS VEEVASASEE QAATVEEITA SVHEVSSLVD GTASEAGDAA AASEETSAAI
DEVGKIIENV NVIVDKVSRE ISIFRV
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