More than 300 homologs were found in PanDaTox collection
for query gene Gmet_3324 on replicon NC_007517
Organism: Geobacter metallireducens GS-15



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002939  GSU2423  methyl-accepting chemotaxis protein, putative  82.14 
 
 
533 aa  886    Geobacter sulfurreducens PCA  Bacteria  normal  0.494868  n/a   
 
 
-
 
NC_007517  Gmet_3324  methyl-accepting chemotaxis sensory transducer  100 
 
 
534 aa  1085    Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_1557  methyl-accepting chemotaxis sensory transducer  55.07 
 
 
526 aa  557  1e-157  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_3880  methyl-accepting chemotaxis sensory transducer  47.07 
 
 
509 aa  461  9.999999999999999e-129  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3968  methyl-accepting chemotaxis sensory transducer  47.25 
 
 
509 aa  460  9.999999999999999e-129  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00000000439597 
 
 
-
 
NC_007760  Adeh_1374  methyl-accepting chemotaxis sensory transducer  36.39 
 
 
908 aa  205  2e-51  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_2483  methyl-accepting chemotaxis sensory transducer  38.67 
 
 
905 aa  200  6e-50  Anaeromyxobacter sp. K  Bacteria  normal  0.611307  n/a   
 
 
-
 
NC_011891  A2cp1_2579  methyl-accepting chemotaxis sensory transducer  38.67 
 
 
905 aa  199  7.999999999999999e-50  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_0326  methyl-accepting chemotaxis sensory transducer  37.3 
 
 
693 aa  190  5e-47  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.776731  n/a   
 
 
-
 
NC_011891  A2cp1_0369  methyl-accepting chemotaxis sensory transducer  36.34 
 
 
725 aa  185  2.0000000000000003e-45  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_0356  methyl-accepting chemotaxis sensory transducer  35.77 
 
 
725 aa  182  1e-44  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_3278  methyl-accepting chemotaxis sensory transducer  32.36 
 
 
880 aa  179  9e-44  Anaeromyxobacter sp. K  Bacteria  normal  0.0350486  n/a   
 
 
-
 
NC_007760  Adeh_3162  methyl-accepting chemotaxis sensory transducer  32.71 
 
 
569 aa  162  1e-38  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1735  methyl-accepting chemotaxis sensory transducer  25.42 
 
 
868 aa  157  5.0000000000000005e-37  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007796  Mhun_0016  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  25.14 
 
 
1009 aa  154  2.9999999999999998e-36  Methanospirillum hungatei JF-1  Archaea  normal  0.0724205  normal 
 
 
-
 
NC_011146  Gbem_2944  methyl-accepting chemotaxis sensory transducer  25.33 
 
 
780 aa  150  4e-35  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_0298  methyl-accepting chemotaxis sensory transducer  28.92 
 
 
600 aa  150  6e-35  Clostridium thermocellum ATCC 27405  Bacteria  unclonable  0.000000337227  n/a   
 
 
-
 
NC_007796  Mhun_0951  methyl-accepting chemotaxis sensory transducer  26.81 
 
 
1332 aa  149  2.0000000000000003e-34  Methanospirillum hungatei JF-1  Archaea  normal  0.514754  normal  0.661078 
 
 
-
 
NC_009012  Cthe_3030  methyl-accepting chemotaxis sensory transducer  34.14 
 
 
832 aa  145  1e-33  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00284544  n/a   
 
 
-
 
NC_007796  Mhun_0008  methyl-accepting chemotaxis sensory transducer  28.02 
 
 
519 aa  146  1e-33  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_011146  Gbem_2945  methyl-accepting chemotaxis sensory transducer  24.95 
 
 
780 aa  145  2e-33  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011832  Mpal_1710  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  31.3 
 
 
1355 aa  144  4e-33  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_011146  Gbem_2942  methyl-accepting chemotaxis sensory transducer  26.54 
 
 
1049 aa  144  5e-33  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1733  methyl-accepting chemotaxis sensory transducer  27.7 
 
 
823 aa  143  7e-33  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2772  methyl-accepting chemotaxis sensory transducer  30 
 
 
735 aa  142  9.999999999999999e-33  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_012918  GM21_1280  methyl-accepting chemotaxis sensory transducer  26.53 
 
 
1048 aa  142  9.999999999999999e-33  Geobacter sp. M21  Bacteria  n/a    normal  0.0818053 
 
 
-
 
NC_011146  Gbem_1482  methyl-accepting chemotaxis sensory transducer  29.14 
 
 
735 aa  138  3.0000000000000003e-31  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2710  methyl-accepting chemotaxis sensory transducer  26.3 
 
 
969 aa  131  3e-29  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_0613  methyl-accepting chemotaxis sensory transducer  27.89 
 
 
759 aa  128  2.0000000000000002e-28  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.194714 
 
 
-
 
NC_009712  Mboo_1248  methyl-accepting chemotaxis sensory transducer  25.41 
 
 
981 aa  124  6e-27  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.206477  normal 
 
 
-
 
NC_007517  Gmet_2423  methyl-accepting chemotaxis sensory transducer  29.25 
 
 
740 aa  122  9.999999999999999e-27  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_011832  Mpal_1775  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  25 
 
 
937 aa  118  1.9999999999999998e-25  Methanosphaerula palustris E1-9c  Archaea  normal  0.303689  normal 
 
 
-
 
NC_007796  Mhun_0010  putative PAS/PAC sensor protein  34.25 
 
 
750 aa  117  3.9999999999999997e-25  Methanospirillum hungatei JF-1  Archaea  normal  0.0248614  normal 
 
 
-
 
NC_011989  Avi_3947  methyl-accepting chemotaxis protein  27.11 
 
 
619 aa  117  3.9999999999999997e-25  Agrobacterium vitis S4  Bacteria  normal  0.412994  n/a   
 
 
-
 
NC_012918  GM21_1294  methyl-accepting chemotaxis sensory transducer  24.8 
 
 
686 aa  117  6e-25  Geobacter sp. M21  Bacteria  n/a    hitchhiker  4.66893e-19 
 
 
-
 
NC_007796  Mhun_1406  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.08 
 
 
1091 aa  115  1.0000000000000001e-24  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.199653 
 
 
-
 
NC_010524  Lcho_3799  methyl-accepting chemotaxis sensory transducer  26.3 
 
 
772 aa  115  2.0000000000000002e-24  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010717  PXO_00041  chemotaxis protein  24.95 
 
 
752 aa  115  3e-24  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.292066  n/a   
 
 
-
 
NC_007796  Mhun_2975  methyl-accepting chemotaxis sensory transducer  26.34 
 
 
758 aa  114  6e-24  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_010717  PXO_00043  chemotaxis protein  24.6 
 
 
705 aa  111  3e-23  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.51691  n/a   
 
 
-
 
NC_002939  GSU1140  methyl-accepting chemotaxis protein  26.25 
 
 
727 aa  110  4.0000000000000004e-23  Geobacter sulfurreducens PCA  Bacteria  normal  0.664897  n/a   
 
 
-
 
NC_010717  PXO_00046  chemotaxis protein  29.66 
 
 
753 aa  110  6e-23  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_011832  Mpal_1707  methyl-accepting chemotaxis sensory transducer  23.45 
 
 
1016 aa  109  1e-22  Methanosphaerula palustris E1-9c  Archaea  normal  0.569761  normal 
 
 
-
 
NC_007796  Mhun_0990  methyl-accepting chemotaxis sensory transducer  24.87 
 
 
824 aa  109  1e-22  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.256608 
 
 
-
 
NC_009456  VC0395_0151  methyl-accepting chemotaxis protein  25.48 
 
 
678 aa  107  4e-22  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_1169  methyl-accepting chemotaxis sensory transducer  26.52 
 
 
740 aa  107  5e-22  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_3007  methyl-accepting chemotaxis sensory transducer  27.19 
 
 
707 aa  107  5e-22  Stenotrophomonas maltophilia R551-3  Bacteria  normal  decreased coverage  0.00177393 
 
 
-
 
NC_011832  Mpal_2633  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  23.93 
 
 
806 aa  107  7e-22  Methanosphaerula palustris E1-9c  Archaea  normal  0.0337434  hitchhiker  0.00302183 
 
 
-
 
NC_008789  Hhal_2163  methyl-accepting chemotaxis sensory transducer  32.38 
 
 
610 aa  106  9e-22  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1294  methyl-accepting chemotaxis protein  23.67 
 
 
962 aa  106  1e-21  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_1526  methyl-accepting chemotaxis sensory transducer  24.87 
 
 
858 aa  105  1e-21  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.787952  normal  0.35844 
 
 
-
 
NC_011071  Smal_1846  methyl-accepting chemotaxis sensory transducer  27.09 
 
 
755 aa  104  3e-21  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.422723  normal  0.381468 
 
 
-
 
NC_009092  Shew_0111  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  31.07 
 
 
864 aa  104  3e-21  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_2019  methyl-accepting chemotaxis sensory transducer  33.61 
 
 
567 aa  104  5e-21  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_011981  Avi_7320  methyl-accepting chemotaxis protein  24.01 
 
 
774 aa  104  5e-21  Agrobacterium vitis S4  Bacteria  normal  0.364364  n/a   
 
 
-
 
NC_007298  Daro_0728  histidine kinase, HAMP region: chemotaxis sensory transducer  27.98 
 
 
792 aa  103  9e-21  Dechloromonas aromatica RCB  Bacteria  normal  0.066629  normal 
 
 
-
 
NC_011071  Smal_3896  methyl-accepting chemotaxis sensory transducer  28.44 
 
 
706 aa  103  9e-21  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.337027  normal  0.882129 
 
 
-
 
NC_008609  Ppro_1601  methyl-accepting chemotaxis sensory transducer  25.98 
 
 
1500 aa  102  2e-20  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_1847  methyl-accepting chemotaxis sensory transducer  30.45 
 
 
793 aa  101  4e-20  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.143361  normal  0.380239 
 
 
-
 
NC_007796  Mhun_1422  methyl-accepting chemotaxis sensory transducer  24.55 
 
 
704 aa  100  5e-20  Methanospirillum hungatei JF-1  Archaea  normal  0.215131  normal  0.131474 
 
 
-
 
NC_007520  Tcr_0361  methyl-accepting chemotaxis sensory transducer  23.8 
 
 
601 aa  100  6e-20  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_2968  methyl-accepting chemotaxis sensory transducer  38.75 
 
 
572 aa  100  6e-20  Acidovorax sp. JS42  Bacteria  normal  normal  0.536058 
 
 
-
 
NC_007796  Mhun_0347  methyl-accepting chemotaxis sensory transducer  25.98 
 
 
706 aa  100  7e-20  Methanospirillum hungatei JF-1  Archaea  normal  0.765539  normal  0.695737 
 
 
-
 
NC_008700  Sama_3497  putative methyl-accepting chemotaxis sensory transducer  28.2 
 
 
860 aa  100  9e-20  Shewanella amazonensis SB2B  Bacteria  normal  0.19961  normal 
 
 
-
 
NC_012856  Rpic12D_3066  methyl-accepting chemotaxis sensory transducer  30.4 
 
 
662 aa  99.8  1e-19  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_3485  methyl-accepting chemotaxis sensory transducer  37.35 
 
 
573 aa  99.4  1e-19  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000328178 
 
 
-
 
NC_009832  Spro_1415  methyl-accepting chemotaxis sensory transducer  28.94 
 
 
546 aa  99.8  1e-19  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_2395  methyl-accepting chemotaxis sensory transducer  38.75 
 
 
572 aa  99.8  1e-19  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_0574  methyl-accepting chemotaxis sensory transducer  21.5 
 
 
815 aa  99.4  2e-19  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_0051  methyl-accepting chemotaxis sensory transducer  30.04 
 
 
796 aa  99  2e-19  Sinorhizobium medicae WSM419  Bacteria  normal  hitchhiker  0.000000874578 
 
 
-
 
NC_012880  Dd703_0727  methyl-accepting chemotaxis sensory transducer  32.35 
 
 
559 aa  99  2e-19  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_0184  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  32.51 
 
 
863 aa  99  2e-19  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_3412  methyl-accepting chemotaxis sensory transducer  30.4 
 
 
662 aa  99.4  2e-19  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_2022  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  28.16 
 
 
748 aa  98.2  3e-19  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_2778  methyl-accepting chemotaxis sensory transducer  30.88 
 
 
544 aa  98.2  3e-19  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.643433  n/a   
 
 
-
 
NC_003295  RSc3136  putative methyl-accepting chemotaxis transmembrane protein  29.75 
 
 
661 aa  97.4  5e-19  Ralstonia solanacearum GMI1000  Bacteria  normal  0.598743  normal 
 
 
-
 
NC_007348  Reut_B4001  histidine kinase, HAMP region: chemotaxis sensory transducer  28.99 
 
 
585 aa  97.1  7e-19  Ralstonia eutropha JMP134  Bacteria  normal  0.0946714  n/a   
 
 
-
 
NC_010506  Swoo_0164  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  31.8 
 
 
1123 aa  97.1  7e-19  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_0428  methyl-accepting chemotaxis sensory transducer  30.37 
 
 
597 aa  97.1  7e-19  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007796  Mhun_0681  methyl-accepting chemotaxis sensory transducer  22.58 
 
 
701 aa  95.9  1e-18  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_007951  Bxe_A1341  methyl-accepting chemotaxis sensory transducer  31.37 
 
 
558 aa  96.3  1e-18  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_0222  methyl-accepting chemotaxis sensory transducer  30.42 
 
 
642 aa  95.5  2e-18  Caulobacter sp. K31  Bacteria  normal  0.414219  normal  0.376796 
 
 
-
 
NC_012880  Dd703_2474  methyl-accepting chemotaxis sensory transducer  32.84 
 
 
552 aa  95.9  2e-18  Dickeya dadantii Ech703  Bacteria  normal  0.356267  n/a   
 
 
-
 
NC_011989  Avi_0980  methyl-accepting chemotaxis protein  28.26 
 
 
611 aa  95.1  2e-18  Agrobacterium vitis S4  Bacteria  normal  0.442512  n/a   
 
 
-
 
NC_010681  Bphyt_2793  methyl-accepting chemotaxis sensory transducer  37.42 
 
 
573 aa  95.9  2e-18  Burkholderia phytofirmans PsJN  Bacteria  normal  0.22826  normal  0.238924 
 
 
-
 
NC_012791  Vapar_4188  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.65 
 
 
566 aa  95.9  2e-18  Variovorax paradoxus S110  Bacteria  normal  0.210427  n/a   
 
 
-
 
NC_008752  Aave_2643  methyl-accepting chemotaxis sensory transducer  28.78 
 
 
541 aa  95.5  2e-18  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0238907  normal  0.0164957 
 
 
-
 
NC_011832  Mpal_2271  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  23.76 
 
 
1104 aa  95.1  3e-18  Methanosphaerula palustris E1-9c  Archaea  normal  0.292314  normal 
 
 
-
 
NC_011989  Avi_0806  methyl-accepting chemotaxis protein  29.92 
 
 
842 aa  94.7  3e-18  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1804  methyl-accepting chemotaxis sensory transducer  30.99 
 
 
562 aa  94.7  3e-18  Dickeya zeae Ech1591  Bacteria  normal  0.0522685  n/a   
 
 
-
 
NC_009483  Gura_2992  methyl-accepting chemotaxis sensory transducer  25.8 
 
 
733 aa  94.7  4e-18  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00047  chemotaxis protein  24.5 
 
 
733 aa  94.7  4e-18  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_010625  Bphy_6319  methyl-accepting chemotaxis sensory transducer  35.19 
 
 
549 aa  94.7  4e-18  Burkholderia phymatum STM815  Bacteria  normal  0.249944  normal 
 
 
-
 
NC_011989  Avi_1208  methyl-accepting chemotaxis protein  30.4 
 
 
604 aa  94.7  4e-18  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_3537  methyl-accepting chemotaxis sensory transducer  26.79 
 
 
843 aa  94.4  5e-18  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_007509  Bcep18194_C6641  methyl-accepting chemotaxis sensory transducer  31 
 
 
609 aa  94.4  5e-18  Burkholderia sp. 383  Bacteria  normal  normal  0.0855945 
 
 
-
 
NC_011992  Dtpsy_2969  methyl-accepting chemotaxis sensory transducer  29.6 
 
 
550 aa  94  5e-18  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_3767  methyl-accepting chemotaxis sensory transducer  36.13 
 
 
544 aa  94.4  5e-18  Delftia acidovorans SPH-1  Bacteria  normal  0.155197  normal  0.170651 
 
 
-
 
NC_008463  PA14_02220  putative chemotaxis transducer  29.34 
 
 
679 aa  94.4  5e-18  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.329962  normal 
 
 
-
 
NC_008752  Aave_0035  methyl-accepting chemotaxis sensory transducer  25.71 
 
 
558 aa  94.4  5e-18  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
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