More than 300 homologs were found in PanDaTox collection
for query gene Dret_2098 on replicon NC_013223
Organism: Desulfohalobium retbaense DSM 5692



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013223  Dret_2098  binding-protein-dependent transport systems inner membrane component  100 
 
 
289 aa  577  1e-164  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.0888929 
 
 
-
 
NC_007963  Csal_2092  binding-protein-dependent transport systems inner membrane component  52.41 
 
 
292 aa  309  4e-83  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_2262  binding-protein-dependent transport systems inner membrane component  52.31 
 
 
303 aa  307  1.0000000000000001e-82  Pseudomonas putida KT2440  Bacteria  normal  decreased coverage  0.000854732 
 
 
-
 
NC_009439  Pmen_2044  binding-protein-dependent transport systems inner membrane component  50.88 
 
 
287 aa  307  1.0000000000000001e-82  Pseudomonas mendocina ymp  Bacteria  normal  0.071999  normal  0.651728 
 
 
-
 
NC_009512  Pput_3476  binding-protein-dependent transport systems inner membrane component  52.31 
 
 
288 aa  306  2.0000000000000002e-82  Pseudomonas putida F1  Bacteria  normal  0.747146  normal  0.0291568 
 
 
-
 
NC_010501  PputW619_1735  binding-protein-dependent transport systems inner membrane component  51.4 
 
 
287 aa  306  4.0000000000000004e-82  Pseudomonas putida W619  Bacteria  normal  normal  0.336852 
 
 
-
 
NC_010322  PputGB1_1895  binding-protein-dependent transport systems inner membrane component  52.31 
 
 
288 aa  306  4.0000000000000004e-82  Pseudomonas putida GB-1  Bacteria  normal  normal  0.248949 
 
 
-
 
NC_007493  RSP_2666  ABC sugar (glycerol) transporter, inner membrane subunit  49.48 
 
 
290 aa  305  8.000000000000001e-82  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_1324  binding-protein-dependent transport systems inner membrane component  49.48 
 
 
290 aa  305  8.000000000000001e-82  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_3738  ABC transporter, permease protein  50 
 
 
288 aa  300  2e-80  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.482953  n/a   
 
 
-
 
NC_007005  Psyr_1739  binding-protein dependent transport system inner membrane protein  50 
 
 
288 aa  300  2e-80  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_5938  binding-protein-dependent transport systems inner membrane component  53.02 
 
 
294 aa  300  2e-80  Haliangium ochraceum DSM 14365  Bacteria  normal  0.776913  normal 
 
 
-
 
NC_009654  Mmwyl1_0378  binding-protein-dependent transport systems inner membrane component  52.3 
 
 
289 aa  299  3e-80  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.374206 
 
 
-
 
NC_007492  Pfl01_3633  binding-protein dependent transport system inner membrane protein  50.18 
 
 
288 aa  299  4e-80  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.27163 
 
 
-
 
NC_009428  Rsph17025_1205  binding-protein-dependent transport systems inner membrane component  49.83 
 
 
290 aa  298  6e-80  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.997435 
 
 
-
 
NC_008687  Pden_4390  binding-protein-dependent transport systems inner membrane component  50.34 
 
 
295 aa  295  5e-79  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.117002 
 
 
-
 
NC_013173  Dbac_1442  binding-protein-dependent transport systems inner membrane component  52.25 
 
 
289 aa  295  9e-79  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0523794  n/a   
 
 
-
 
NC_008709  Ping_3172  ABC sugar (glycerol) transporter binding protein inner membrane protein  53.79 
 
 
286 aa  293  2e-78  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_3130  sugar ABC transporter  49.1 
 
 
287 aa  291  1e-77  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.199935  normal 
 
 
-
 
NC_007802  Jann_4102  binding-protein-dependent transport systems inner membrane component  48.26 
 
 
290 aa  290  2e-77  Jannaschia sp. CCS1  Bacteria  normal  0.414832  normal  0.309443 
 
 
-
 
NC_008044  TM1040_2419  binding-protein-dependent transport systems inner membrane component  49.3 
 
 
287 aa  290  2e-77  Ruegeria sp. TM1040  Bacteria  normal  0.0339831  normal  0.708038 
 
 
-
 
NC_003295  RSc3048  sugar-phosphate transmembrane ABC transporter protein  49.31 
 
 
296 aa  287  1e-76  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.071315 
 
 
-
 
NC_012856  Rpic12D_2983  binding-protein-dependent transport systems inner membrane component  48.96 
 
 
296 aa  286  4e-76  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_5369  binding-protein-dependent transport systems inner membrane component  52.26 
 
 
297 aa  286  4e-76  Burkholderia phymatum STM815  Bacteria  normal  normal  0.469601 
 
 
-
 
NC_010682  Rpic_3330  binding-protein-dependent transport systems inner membrane component  48.96 
 
 
296 aa  286  4e-76  Ralstonia pickettii 12J  Bacteria  normal  normal  0.670382 
 
 
-
 
NC_012852  Rleg_5980  binding-protein-dependent transport systems inner membrane component  50.53 
 
 
288 aa  285  5e-76  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_2906  binding-protein-dependent transport systems inner membrane component  51.59 
 
 
288 aa  285  9e-76  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A2207  binding-protein dependent transport system inner membrane protein  51.05 
 
 
294 aa  283  3.0000000000000004e-75  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4892  binding-protein-dependent transport systems inner membrane component  47.64 
 
 
300 aa  281  8.000000000000001e-75  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.963081  n/a   
 
 
-
 
NC_007958  RPD_4066  binding-protein-dependent transport systems inner membrane component  47.97 
 
 
300 aa  281  1e-74  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.556479  normal  0.615548 
 
 
-
 
NC_007925  RPC_1364  binding-protein-dependent transport systems inner membrane component  47.64 
 
 
300 aa  279  3e-74  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.641446  normal 
 
 
-
 
NC_008254  Meso_1594  binding-protein-dependent transport systems inner membrane component  52.1 
 
 
288 aa  279  3e-74  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_0097  ABC transporter membrane spanning protein (sugar)  51.94 
 
 
295 aa  279  4e-74  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_2232  binding-protein-dependent transport systems inner membrane component  51.25 
 
 
294 aa  278  9e-74  Cupriavidus metallidurans CH34  Bacteria  normal  0.0344398  normal  0.169998 
 
 
-
 
NC_007778  RPB_4214  binding-protein-dependent transport systems inner membrane component  47.64 
 
 
300 aa  278  1e-73  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.586864 
 
 
-
 
NC_010676  Bphyt_6727  binding-protein-dependent transport systems inner membrane component  51.57 
 
 
298 aa  276  3e-73  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_009668  Oant_3979  binding-protein-dependent transport systems inner membrane component  50.53 
 
 
288 aa  275  4e-73  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.774682  n/a   
 
 
-
 
NC_009485  BBta_2224  putative ABC transporter permease protein  47.46 
 
 
300 aa  275  4e-73  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.405929  normal  0.034026 
 
 
-
 
NC_011371  Rleg2_6467  binding-protein-dependent transport systems inner membrane component  51.24 
 
 
288 aa  275  6e-73  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_3394  binding-protein-dependent transport systems inner membrane component  49.65 
 
 
296 aa  273  2.0000000000000002e-72  Variovorax paradoxus S110  Bacteria  normal  0.391737  n/a   
 
 
-
 
NC_011992  Dtpsy_0378  binding-protein-dependent transport systems inner membrane component  50.7 
 
 
298 aa  273  2.0000000000000002e-72  Acidovorax ebreus TPSY  Bacteria  normal  0.0188782  n/a   
 
 
-
 
NC_008752  Aave_0606  binding-protein-dependent transport systems inner membrane component  51.25 
 
 
298 aa  272  4.0000000000000004e-72  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_2320  binding-protein-dependent transport systems inner membrane component  48.95 
 
 
298 aa  268  5.9999999999999995e-71  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.292517  normal  0.792602 
 
 
-
 
NC_010511  M446_1972  binding-protein-dependent transport systems inner membrane component  48.79 
 
 
319 aa  266  2e-70  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_1027  binding-protein-dependent transport systems inner membrane component  50.17 
 
 
297 aa  263  3e-69  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_3674  binding-protein-dependent transport systems inner membrane component  50 
 
 
297 aa  261  6e-69  Rhodoferax ferrireducens T118  Bacteria  normal  0.0834675  n/a   
 
 
-
 
NC_007948  Bpro_0480  binding-protein-dependent transport systems inner membrane component  50.53 
 
 
296 aa  261  1e-68  Polaromonas sp. JS666  Bacteria  normal  0.0207202  normal 
 
 
-
 
NC_008782  Ajs_0386  binding-protein-dependent transport systems inner membrane component  47.72 
 
 
298 aa  248  6e-65  Acidovorax sp. JS42  Bacteria  normal  0.675577  normal 
 
 
-
 
NC_007802  Jann_4106  binding-protein-dependent transport systems inner membrane component  36.93 
 
 
287 aa  180  2e-44  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_0286  binding-protein-dependent transport systems inner membrane component  34.3 
 
 
291 aa  159  7e-38  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.231338  normal 
 
 
-
 
NC_013526  Tter_2052  binding-protein-dependent transport systems inner membrane component  33.69 
 
 
291 aa  157  2e-37  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_1389  binding-protein-dependent transport systems inner membrane component  34.28 
 
 
300 aa  156  3e-37  Jannaschia sp. CCS1  Bacteria  normal  0.0114019  normal  0.0892858 
 
 
-
 
NC_011369  Rleg2_0257  binding-protein-dependent transport systems inner membrane component  33.94 
 
 
291 aa  154  2e-36  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.958787  normal 
 
 
-
 
NC_013744  Htur_4398  binding-protein-dependent transport systems inner membrane component  33.7 
 
 
314 aa  147  3e-34  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.0144983  n/a   
 
 
-
 
NC_008686  Pden_1048  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
308 aa  143  3e-33  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_5739  ABC transporter permease  34.62 
 
 
318 aa  141  9.999999999999999e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.184804 
 
 
-
 
NC_012848  Rleg_5199  binding-protein-dependent transport systems inner membrane component  27.59 
 
 
312 aa  140  1.9999999999999998e-32  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0867066 
 
 
-
 
NC_011368  Rleg2_5469  binding-protein-dependent transport systems inner membrane component  27.59 
 
 
313 aa  139  3.9999999999999997e-32  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.394829 
 
 
-
 
NC_010003  Pmob_0306  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
294 aa  139  3.9999999999999997e-32  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_2698  binding-protein-dependent transport systems inner membrane component  31.67 
 
 
295 aa  139  4.999999999999999e-32  Sinorhizobium medicae WSM419  Bacteria  normal  0.0832027  normal 
 
 
-
 
NC_014151  Cfla_1127  binding-protein-dependent transport systems inner membrane component  31.33 
 
 
328 aa  138  7.999999999999999e-32  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.190953  hitchhiker  0.00155627 
 
 
-
 
NC_013171  Apre_0062  binding-protein-dependent transport systems inner membrane component  31.27 
 
 
285 aa  138  1e-31  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_2455  binding-protein-dependent transport systems inner membrane component  32.85 
 
 
313 aa  137  2e-31  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_2427  binding-protein-dependent transport systems inner membrane component  32 
 
 
322 aa  136  3.0000000000000003e-31  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.535373  normal  0.626108 
 
 
-
 
NC_010676  Bphyt_5637  binding-protein-dependent transport systems inner membrane component  33.11 
 
 
318 aa  136  5e-31  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_1755  ABC transporter permease  31.68 
 
 
312 aa  135  8e-31  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.576454  normal  0.392142 
 
 
-
 
NC_010625  Bphy_6370  binding-protein-dependent transport systems inner membrane component  32.67 
 
 
318 aa  132  6e-30  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_2284  binding-protein-dependent transport systems inner membrane component  30.29 
 
 
291 aa  131  1.0000000000000001e-29  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.257134 
 
 
-
 
NC_009952  Dshi_0548  ABC-type sugar / sn-glycerol-3-phosphate transport system permease protein ugpA  32.71 
 
 
288 aa  130  2.0000000000000002e-29  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_2309  binding-protein-dependent transport systems inner membrane component  30.12 
 
 
427 aa  130  2.0000000000000002e-29  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.00000129291  n/a   
 
 
-
 
NC_014210  Ndas_3354  binding-protein-dependent transport systems inner membrane component  33.22 
 
 
299 aa  130  3e-29  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_009667  Oant_0362  binding-protein-dependent transport systems inner membrane component  27.9 
 
 
312 aa  130  4.0000000000000003e-29  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.541424  n/a   
 
 
-
 
NC_012669  Bcav_2718  binding-protein-dependent transport systems inner membrane component  33.95 
 
 
330 aa  129  5.0000000000000004e-29  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.21265 
 
 
-
 
NC_009486  Tpet_0645  binding-protein-dependent transport systems inner membrane component  32.53 
 
 
309 aa  129  5.0000000000000004e-29  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.000282921  n/a   
 
 
-
 
NC_013521  Sked_11550  carbohydrate ABC transporter membrane protein  33.46 
 
 
354 aa  128  1.0000000000000001e-28  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.151535  normal  0.0144146 
 
 
-
 
NC_008726  Mvan_2623  binding-protein-dependent transport systems inner membrane component  33.91 
 
 
287 aa  126  5e-28  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_4681  binding-protein-dependent transport systems inner membrane component  36.68 
 
 
289 aa  125  6e-28  Burkholderia ambifaria MC40-6  Bacteria  normal  0.205446  normal 
 
 
-
 
NC_010483  TRQ2_0670  binding-protein-dependent transport systems inner membrane component  31.76 
 
 
294 aa  125  6e-28  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_3494  binding-protein-dependent transport systems inner membrane component  28.88 
 
 
311 aa  125  8.000000000000001e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  0.716912  normal  0.704951 
 
 
-
 
NC_007963  Csal_2611  binding-protein-dependent transport systems inner membrane component  30.47 
 
 
280 aa  125  9e-28  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_1896  binding-protein-dependent transport systems inner membrane component  29.01 
 
 
296 aa  124  1e-27  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  1.0543799999999999e-20 
 
 
-
 
NC_008391  Bamb_4157  binding-protein-dependent transport systems inner membrane component  36.24 
 
 
289 aa  124  1e-27  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_0700  binding-protein-dependent transport systems inner membrane component  30.48 
 
 
336 aa  124  2e-27  Polaromonas sp. JS666  Bacteria  normal  0.788363  normal 
 
 
-
 
NC_009338  Mflv_3776  binding-protein-dependent transport systems inner membrane component  32.4 
 
 
286 aa  124  2e-27  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.771132  normal  0.363599 
 
 
-
 
NC_009664  Krad_4401  binding-protein-dependent transport systems inner membrane component  31.54 
 
 
316 aa  124  2e-27  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_3593  binding-protein-dependent transport systems inner membrane component  35.81 
 
 
289 aa  123  3e-27  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_5509  binding-protein-dependent transport systems inner membrane component  35.81 
 
 
289 aa  123  3e-27  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.438366  normal 
 
 
-
 
NC_008543  Bcen2424_4774  binding-protein-dependent transport systems inner membrane component  35.81 
 
 
289 aa  123  3e-27  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.808754 
 
 
-
 
NC_007511  Bcep18194_B0940  ABC sugar transporter, inner membrane subunit  35.37 
 
 
289 aa  123  4e-27  Burkholderia sp. 383  Bacteria  normal  normal  0.298922 
 
 
-
 
NC_014213  Mesil_3421  binding-protein-dependent transport systems inner membrane component  32.62 
 
 
307 aa  123  4e-27  Meiothermus silvanus DSM 9946  Bacteria  normal  0.556907  normal 
 
 
-
 
NC_014213  Mesil_3227  extracellular solute-binding protein family 1  32.62 
 
 
307 aa  123  4e-27  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00159401  normal  0.987884 
 
 
-
 
NC_013947  Snas_4077  binding-protein-dependent transport systems inner membrane component  30.22 
 
 
317 aa  121  9.999999999999999e-27  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.140823  normal  0.731226 
 
 
-
 
NC_014212  Mesil_1016  binding-protein-dependent transport systems inner membrane component  31.56 
 
 
301 aa  120  1.9999999999999998e-26  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_011661  Dtur_1742  binding-protein-dependent transport systems inner membrane component  32.99 
 
 
292 aa  120  1.9999999999999998e-26  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_006369  lpl1695  hypothetical protein  32.14 
 
 
292 aa  120  1.9999999999999998e-26  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_013205  Aaci_2236  binding-protein-dependent transport systems inner membrane component  33.74 
 
 
315 aa  120  1.9999999999999998e-26  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_3682  binding-protein-dependent transport systems inner membrane component  35.57 
 
 
283 aa  120  1.9999999999999998e-26  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_0803  binding-protein-dependent transport systems inner membrane component  34.09 
 
 
299 aa  120  1.9999999999999998e-26  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.270687  normal 
 
 
-
 
NC_009664  Krad_2091  binding-protein-dependent transport systems inner membrane component  31.69 
 
 
292 aa  120  1.9999999999999998e-26  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_0953  binding-protein-dependent transport systems inner membrane component  31.95 
 
 
292 aa  120  3e-26  Rhodoferax ferrireducens T118  Bacteria  normal  0.568052  n/a   
 
 
-
 
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