Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2906 |
Symbol | |
ID | 5323783 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 3050110 |
End bp | 3050976 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640791858 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001328571 |
Protein GI | 150398104 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAAGA CCTGGAACAA CAAGGCCTGG TTCATGGTCC TGCCGGTGCT GGTGCTTGTC GCTTTCTCGG CGGTGATCCC GCTGATGACC GTCGTCAACT ATTCGGTACA GGACACTTTC GGCAATAACG AGTTCTTCTG GGCCGGAACC GACTGGTTCC TGGATGTGCT CGAATCCGAC CGGTTCTGGG ACGCACTCAC GCGCAACCTG ATCTTTTCGG CAATCATTCT CTCGATAGAA ATCCCGCTCG GCATCATCAT CGCGCTCAAC ATGCCGAAGA AGGGCATCGG CGTGCCGATC TGCCTCGTTC TGATGGCGCT GCCGCTGCTC ATTCCGTGGA ACGTCGTCGG CACTATCTGG CAGGTCTTCG GCCGCGTCGA CATCGGCCTG CTCGGACGCA CGCTCGCCTC GCTAGGCATC AATTATAATT ACGTGCAGAA CCCGTTCGAC GCCTGGGTCA CGCTGATCGT CATGGATGTC TGGCACTGGA CAAGCCTGGT CGTGCTGCTC TGCTATGCCG GTCTGGTCTC GATCCCCGAC GCCTATTACC AGGCCGCCAA GATCGACGGC GCCTCGCGCT GGTCGGTCTT CCGCTACATC CAGCTTCCGA AGATGAAGCG TGTGCTTCTG ATCGCTTTCC TGCTGCGCTT CATGGACAGC TTCATGATCT ACACGGAACC CTTCGTCGTG ACCGGCGGCG GTCCCGGCAA CTCGACCACC TTCCTGTCCA TTGATCTGGT CAAGACGGCG ATCGGCCAAT TCGACCTCGG CCCGGCCGCA GCCCTCTCGA TCATCTACTT CCTCATCATC CTGCTCTTGT CGTGGATCTT CTACACGGTG ATGACCACGA GCGACGCGCA AGGCTGA
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Protein sequence | MEKTWNNKAW FMVLPVLVLV AFSAVIPLMT VVNYSVQDTF GNNEFFWAGT DWFLDVLESD RFWDALTRNL IFSAIILSIE IPLGIIIALN MPKKGIGVPI CLVLMALPLL IPWNVVGTIW QVFGRVDIGL LGRTLASLGI NYNYVQNPFD AWVTLIVMDV WHWTSLVVLL CYAGLVSIPD AYYQAAKIDG ASRWSVFRYI QLPKMKRVLL IAFLLRFMDS FMIYTEPFVV TGGGPGNSTT FLSIDLVKTA IGQFDLGPAA ALSIIYFLII LLLSWIFYTV MTTSDAQG
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