More than 300 homologs were found in PanDaTox collection
for query gene Bphy_5369 on replicon NC_010623
Organism: Burkholderia phymatum STM815



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010623  Bphy_5369  binding-protein-dependent transport systems inner membrane component  100 
 
 
297 aa  600  1e-170  Burkholderia phymatum STM815  Bacteria  normal  normal  0.469601 
 
 
-
 
NC_010676  Bphyt_6727  binding-protein-dependent transport systems inner membrane component  94.28 
 
 
298 aa  538  9.999999999999999e-153  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc3048  sugar-phosphate transmembrane ABC transporter protein  80.81 
 
 
296 aa  499  1e-140  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.071315 
 
 
-
 
NC_012856  Rpic12D_2983  binding-protein-dependent transport systems inner membrane component  79.8 
 
 
296 aa  496  1e-139  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_3330  binding-protein-dependent transport systems inner membrane component  79.8 
 
 
296 aa  496  1e-139  Ralstonia pickettii 12J  Bacteria  normal  normal  0.670382 
 
 
-
 
NC_007347  Reut_A2207  binding-protein dependent transport system inner membrane protein  79.52 
 
 
294 aa  464  9.999999999999999e-131  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_3394  binding-protein-dependent transport systems inner membrane component  80.63 
 
 
296 aa  462  1e-129  Variovorax paradoxus S110  Bacteria  normal  0.391737  n/a   
 
 
-
 
NC_007973  Rmet_2232  binding-protein-dependent transport systems inner membrane component  78.84 
 
 
294 aa  459  9.999999999999999e-129  Cupriavidus metallidurans CH34  Bacteria  normal  0.0344398  normal  0.169998 
 
 
-
 
NC_008786  Veis_2320  binding-protein-dependent transport systems inner membrane component  75.09 
 
 
298 aa  444  1.0000000000000001e-124  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.292517  normal  0.792602 
 
 
-
 
NC_011992  Dtpsy_0378  binding-protein-dependent transport systems inner membrane component  79.93 
 
 
298 aa  442  1e-123  Acidovorax ebreus TPSY  Bacteria  normal  0.0188782  n/a   
 
 
-
 
NC_008752  Aave_0606  binding-protein-dependent transport systems inner membrane component  76.69 
 
 
298 aa  439  9.999999999999999e-123  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_1027  binding-protein-dependent transport systems inner membrane component  80.48 
 
 
297 aa  436  1e-121  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_3674  binding-protein-dependent transport systems inner membrane component  77.74 
 
 
297 aa  431  1e-119  Rhodoferax ferrireducens T118  Bacteria  normal  0.0834675  n/a   
 
 
-
 
NC_007948  Bpro_0480  binding-protein-dependent transport systems inner membrane component  80.63 
 
 
296 aa  429  1e-119  Polaromonas sp. JS666  Bacteria  normal  0.0207202  normal 
 
 
-
 
NC_008782  Ajs_0386  binding-protein-dependent transport systems inner membrane component  79.23 
 
 
298 aa  419  1e-116  Acidovorax sp. JS42  Bacteria  normal  0.675577  normal 
 
 
-
 
NC_007492  Pfl01_3633  binding-protein dependent transport system inner membrane protein  69.96 
 
 
288 aa  412  1e-114  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.27163 
 
 
-
 
NC_010501  PputW619_1735  binding-protein-dependent transport systems inner membrane component  69.23 
 
 
287 aa  408  1e-113  Pseudomonas putida W619  Bacteria  normal  normal  0.336852 
 
 
-
 
NC_009439  Pmen_2044  binding-protein-dependent transport systems inner membrane component  68.66 
 
 
287 aa  410  1e-113  Pseudomonas mendocina ymp  Bacteria  normal  0.071999  normal  0.651728 
 
 
-
 
NC_002947  PP_2262  binding-protein-dependent transport systems inner membrane component  69.12 
 
 
303 aa  407  1.0000000000000001e-112  Pseudomonas putida KT2440  Bacteria  normal  decreased coverage  0.000854732 
 
 
-
 
NC_004578  PSPTO_3738  ABC transporter, permease protein  68.75 
 
 
288 aa  407  1.0000000000000001e-112  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.482953  n/a   
 
 
-
 
NC_007005  Psyr_1739  binding-protein dependent transport system inner membrane protein  68.75 
 
 
288 aa  407  1.0000000000000001e-112  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_1895  binding-protein-dependent transport systems inner membrane component  68.53 
 
 
288 aa  405  1.0000000000000001e-112  Pseudomonas putida GB-1  Bacteria  normal  normal  0.248949 
 
 
-
 
NC_009654  Mmwyl1_0378  binding-protein-dependent transport systems inner membrane component  68.77 
 
 
289 aa  407  1.0000000000000001e-112  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.374206 
 
 
-
 
NC_009512  Pput_3476  binding-protein-dependent transport systems inner membrane component  69.12 
 
 
288 aa  406  1.0000000000000001e-112  Pseudomonas putida F1  Bacteria  normal  0.747146  normal  0.0291568 
 
 
-
 
NC_013440  Hoch_5938  binding-protein-dependent transport systems inner membrane component  67.01 
 
 
294 aa  400  9.999999999999999e-111  Haliangium ochraceum DSM 14365  Bacteria  normal  0.776913  normal 
 
 
-
 
NC_013173  Dbac_1442  binding-protein-dependent transport systems inner membrane component  66.9 
 
 
289 aa  390  1e-107  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0523794  n/a   
 
 
-
 
NC_007778  RPB_4214  binding-protein-dependent transport systems inner membrane component  63.46 
 
 
300 aa  384  1e-106  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.586864 
 
 
-
 
NC_007925  RPC_1364  binding-protein-dependent transport systems inner membrane component  64.16 
 
 
300 aa  384  1e-106  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.641446  normal 
 
 
-
 
NC_007493  RSP_2666  ABC sugar (glycerol) transporter, inner membrane subunit  65.03 
 
 
290 aa  383  1e-105  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_4066  binding-protein-dependent transport systems inner membrane component  63.46 
 
 
300 aa  384  1e-105  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.556479  normal  0.615548 
 
 
-
 
NC_007963  Csal_2092  binding-protein-dependent transport systems inner membrane component  64.87 
 
 
292 aa  384  1e-105  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_1324  binding-protein-dependent transport systems inner membrane component  65.03 
 
 
290 aa  383  1e-105  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2224  putative ABC transporter permease protein  64.33 
 
 
300 aa  382  1e-105  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.405929  normal  0.034026 
 
 
-
 
NC_011004  Rpal_4892  binding-protein-dependent transport systems inner membrane component  63 
 
 
300 aa  380  1e-104  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.963081  n/a   
 
 
-
 
NC_008709  Ping_3172  ABC sugar (glycerol) transporter binding protein inner membrane protein  67.49 
 
 
286 aa  375  1e-103  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_4102  binding-protein-dependent transport systems inner membrane component  62.59 
 
 
290 aa  374  1e-102  Jannaschia sp. CCS1  Bacteria  normal  0.414832  normal  0.309443 
 
 
-
 
NC_009428  Rsph17025_1205  binding-protein-dependent transport systems inner membrane component  64.69 
 
 
290 aa  374  1e-102  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.997435 
 
 
-
 
NC_012852  Rleg_5980  binding-protein-dependent transport systems inner membrane component  66.19 
 
 
288 aa  367  1e-101  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_008687  Pden_4390  binding-protein-dependent transport systems inner membrane component  63.76 
 
 
295 aa  366  1e-100  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.117002 
 
 
-
 
NC_010511  M446_1972  binding-protein-dependent transport systems inner membrane component  65.05 
 
 
319 aa  355  5.999999999999999e-97  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_2906  binding-protein-dependent transport systems inner membrane component  64.75 
 
 
288 aa  351  1e-95  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_0097  ABC transporter membrane spanning protein (sugar)  64.66 
 
 
295 aa  347  2e-94  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011371  Rleg2_6467  binding-protein-dependent transport systems inner membrane component  66.16 
 
 
288 aa  347  2e-94  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_009668  Oant_3979  binding-protein-dependent transport systems inner membrane component  65.78 
 
 
288 aa  343  2e-93  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.774682  n/a   
 
 
-
 
NC_008044  TM1040_2419  binding-protein-dependent transport systems inner membrane component  59.22 
 
 
287 aa  343  2e-93  Ruegeria sp. TM1040  Bacteria  normal  0.0339831  normal  0.708038 
 
 
-
 
NC_009952  Dshi_3130  sugar ABC transporter  59.93 
 
 
287 aa  341  8e-93  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.199935  normal 
 
 
-
 
NC_008254  Meso_1594  binding-protein-dependent transport systems inner membrane component  62.19 
 
 
288 aa  340  2e-92  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_2098  binding-protein-dependent transport systems inner membrane component  52.26 
 
 
289 aa  303  3.0000000000000004e-81  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.0888929 
 
 
-
 
NC_007802  Jann_4106  binding-protein-dependent transport systems inner membrane component  40.91 
 
 
287 aa  203  3e-51  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_0286  binding-protein-dependent transport systems inner membrane component  29.86 
 
 
291 aa  137  2e-31  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.231338  normal 
 
 
-
 
NC_011369  Rleg2_0257  binding-protein-dependent transport systems inner membrane component  29.76 
 
 
291 aa  133  3e-30  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.958787  normal 
 
 
-
 
NC_008686  Pden_1048  binding-protein-dependent transport systems inner membrane component  32.43 
 
 
308 aa  129  4.0000000000000003e-29  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_2698  binding-protein-dependent transport systems inner membrane component  32.87 
 
 
295 aa  129  4.0000000000000003e-29  Sinorhizobium medicae WSM419  Bacteria  normal  0.0832027  normal 
 
 
-
 
NC_013526  Tter_2052  binding-protein-dependent transport systems inner membrane component  31 
 
 
291 aa  129  7.000000000000001e-29  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_2309  binding-protein-dependent transport systems inner membrane component  28.81 
 
 
427 aa  129  8.000000000000001e-29  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.00000129291  n/a   
 
 
-
 
NC_010003  Pmob_0306  binding-protein-dependent transport systems inner membrane component  32.02 
 
 
294 aa  128  9.000000000000001e-29  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_2455  binding-protein-dependent transport systems inner membrane component  31.09 
 
 
313 aa  127  2.0000000000000002e-28  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_2611  binding-protein-dependent transport systems inner membrane component  29.24 
 
 
280 aa  126  3e-28  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A1261  binding-protein dependent transport system inner membrane protein  30.42 
 
 
298 aa  124  2e-27  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.196832  n/a   
 
 
-
 
NC_009832  Spro_2296  binding-protein-dependent transport systems inner membrane component  35.51 
 
 
304 aa  123  3e-27  Serratia proteamaculans 568  Bacteria  normal  0.44429  normal 
 
 
-
 
NC_012848  Rleg_5199  binding-protein-dependent transport systems inner membrane component  27.08 
 
 
312 aa  123  4e-27  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0867066 
 
 
-
 
NC_011368  Rleg2_5469  binding-protein-dependent transport systems inner membrane component  27.44 
 
 
313 aa  123  5e-27  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.394829 
 
 
-
 
NC_009338  Mflv_3776  binding-protein-dependent transport systems inner membrane component  28.85 
 
 
286 aa  122  5e-27  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.771132  normal  0.363599 
 
 
-
 
NC_012850  Rleg_2427  binding-protein-dependent transport systems inner membrane component  28.92 
 
 
322 aa  122  6e-27  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.535373  normal  0.626108 
 
 
-
 
NC_008726  Mvan_2623  binding-protein-dependent transport systems inner membrane component  31.37 
 
 
287 aa  122  9.999999999999999e-27  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_2091  binding-protein-dependent transport systems inner membrane component  28.57 
 
 
292 aa  120  1.9999999999999998e-26  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_2279  binding-protein-dependent transport systems inner membrane component  30 
 
 
286 aa  121  1.9999999999999998e-26  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_2171  carbohydrate ABC transporter permease  30 
 
 
280 aa  121  1.9999999999999998e-26  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.0580768  n/a   
 
 
-
 
NC_012669  Bcav_0571  binding-protein-dependent transport systems inner membrane component  29.04 
 
 
296 aa  121  1.9999999999999998e-26  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_010159  YpAngola_A2083  carbohydrate ABC transporter permease  30 
 
 
286 aa  120  3e-26  Yersinia pestis Angola  Bacteria  normal  normal  0.0183943 
 
 
-
 
NC_008699  Noca_3682  binding-protein-dependent transport systems inner membrane component  30.53 
 
 
283 aa  119  3.9999999999999996e-26  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_5739  ABC transporter permease  27.3 
 
 
318 aa  120  3.9999999999999996e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.184804 
 
 
-
 
NC_009952  Dshi_0548  ABC-type sugar / sn-glycerol-3-phosphate transport system permease protein ugpA  30.28 
 
 
288 aa  119  6e-26  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_1755  ABC transporter permease  28.24 
 
 
312 aa  118  9e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.576454  normal  0.392142 
 
 
-
 
NC_013744  Htur_4398  binding-protein-dependent transport systems inner membrane component  28.36 
 
 
314 aa  118  1.9999999999999998e-25  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.0144983  n/a   
 
 
-
 
NC_010625  Bphy_6370  binding-protein-dependent transport systems inner membrane component  30.21 
 
 
318 aa  117  1.9999999999999998e-25  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_5637  binding-protein-dependent transport systems inner membrane component  30.18 
 
 
318 aa  117  3e-25  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_01820  permease component of ABC-type sugar transporter  29.66 
 
 
312 aa  117  3e-25  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_1389  binding-protein-dependent transport systems inner membrane component  30.63 
 
 
300 aa  117  3e-25  Jannaschia sp. CCS1  Bacteria  normal  0.0114019  normal  0.0892858 
 
 
-
 
NC_013526  Tter_2527  binding-protein-dependent transport systems inner membrane component  28.72 
 
 
309 aa  117  3e-25  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.849073  n/a   
 
 
-
 
NC_013526  Tter_2208  binding-protein-dependent transport systems inner membrane component  30.2 
 
 
306 aa  116  3.9999999999999997e-25  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.739705  n/a   
 
 
-
 
NC_012880  Dd703_3169  binding-protein-dependent transport systems inner membrane component  32.13 
 
 
290 aa  116  3.9999999999999997e-25  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B0940  ABC sugar transporter, inner membrane subunit  33.48 
 
 
289 aa  115  6e-25  Burkholderia sp. 383  Bacteria  normal  normal  0.298922 
 
 
-
 
NC_008061  Bcen_3593  binding-protein-dependent transport systems inner membrane component  33.48 
 
 
289 aa  116  6e-25  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_4774  binding-protein-dependent transport systems inner membrane component  33.48 
 
 
289 aa  116  6e-25  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.808754 
 
 
-
 
NC_010515  Bcenmc03_5509  binding-protein-dependent transport systems inner membrane component  33.48 
 
 
289 aa  116  6e-25  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.438366  normal 
 
 
-
 
NC_009620  Smed_3811  binding-protein-dependent transport systems inner membrane component  30.82 
 
 
328 aa  115  6e-25  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_4681  binding-protein-dependent transport systems inner membrane component  33.48 
 
 
289 aa  115  6.9999999999999995e-25  Burkholderia ambifaria MC40-6  Bacteria  normal  0.205446  normal 
 
 
-
 
NC_012912  Dd1591_3241  binding-protein-dependent transport systems inner membrane component  32.58 
 
 
290 aa  115  1.0000000000000001e-24  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0321  binding-protein-dependent transport systems inner membrane component  28.97 
 
 
316 aa  115  1.0000000000000001e-24  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_0396  binding-protein-dependent transport systems inner membrane component  28.46 
 
 
307 aa  115  1.0000000000000001e-24  Thermoanaerobacter sp. X514  Bacteria  normal  0.701562  n/a   
 
 
-
 
NC_009675  Anae109_1696  binding-protein-dependent transport systems inner membrane component  35.6 
 
 
291 aa  114  2.0000000000000002e-24  Anaeromyxobacter sp. Fw109-5  Bacteria  hitchhiker  0.00180742  normal 
 
 
-
 
NC_012853  Rleg_5697  binding-protein-dependent transport systems inner membrane component  31.66 
 
 
305 aa  114  2.0000000000000002e-24  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.121734 
 
 
-
 
NC_013205  Aaci_2236  binding-protein-dependent transport systems inner membrane component  29.35 
 
 
315 aa  114  2.0000000000000002e-24  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0953  binding-protein-dependent transport systems inner membrane component  28.06 
 
 
292 aa  114  3e-24  Rhodoferax ferrireducens T118  Bacteria  normal  0.568052  n/a   
 
 
-
 
NC_013411  GYMC61_2958  binding-protein-dependent transport systems inner membrane component  28.23 
 
 
435 aa  113  3e-24  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013595  Sros_3494  binding-protein-dependent transport systems inner membrane component  30.04 
 
 
311 aa  114  3e-24  Streptosporangium roseum DSM 43021  Bacteria  normal  0.716912  normal  0.704951 
 
 
-
 
NC_013093  Amir_1844  binding-protein-dependent transport systems inner membrane component  29.59 
 
 
291 aa  114  3e-24  Actinosynnema mirum DSM 43827  Bacteria  normal  0.476032  n/a   
 
 
-
 
NC_014210  Ndas_3354  binding-protein-dependent transport systems inner membrane component  28.42 
 
 
299 aa  113  3e-24  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_1896  binding-protein-dependent transport systems inner membrane component  27.05 
 
 
296 aa  114  3e-24  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  1.0543799999999999e-20 
 
 
-
 
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