| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4892 |
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| Symbol | |
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| ID | 6412578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5259240 |
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| End bp | 5260142 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642714769 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001993856 |
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| Protein GI | 192293251 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.963081 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGACAAGG TCGTCAACCA GAAAGCCTGG TTCCTGGTGC TGCCGGTGTT TGCCATCGTG
GCGTTCTCGG CGATTCTGCC GCTGATGACG GTGGTGAACT ATTCGGTGCA GGACACCTTC
GGCAACAACC AGTTCTTCTG GAACGGGGTC GGCTGGTTCA AGGAGCTGCT GGATCCGTCG
ACCGATCTGG GTGGCCGGTT CTTCGCCTCG CTGTGGCGCA ACCTGGCGTT CTCGGCGATC
ATTCTCGCCA TTGAAGTCCC GCTCGGCATC GTGGTGGCGC TGGCGATGCC GCGCCACGGC
TGGTCGGTGG CGTTCTGCCT GGTGATCATG GCGCTGCCGC TGTTGATCCC GTGGAACGTG
GTCGGCACGA TCTGGCAGAT CTTCGGCCGT CCCGACATCG GCTTGATGGG CTACACGCTC
AATCATCTCG GCTTCAATTA TAACTACGTG TCCAACGATT TTGACGCCTG GGCCACGGTG
GTGGTGATGG ATGTCTGGCA CTGGACCAGC CTGGTGGCGC TGCTGTGCTA TGCGGGCCTG
AAGTCGATCC CCGACGCGTA TTATCAGGCG GCGCAGATCG ACGGCGCCTC GCGCTGGGCG
GTGTTCAAGG CGATCCAGCT CCCGAAGATG CACCGCGTGC TGCTGATCGC CGTGCTGCTG
CGGTTCATGG ACAGCTTCAT GATCTACACC GAGCCGTTCG TCGTCACCGG CGGCGGGCCG
GGAAATTCGA CCACCTTCAT CTCGATCGAG CTGGTCAAGA TCGCGCTCGG CCAGTTCGAC
CTCGGCAAGG CCGCGGCGCT GTCGATCGTC TACAACCTGA TCATCATTAT CGTGTGCTGG
GTGTTCTACA CCGTGATGAC CAATGCCGGT AACGAGCGGC GACAGGCCGA AGGGAGTATG
TGA
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| Protein sequence | MDKVVNQKAW FLVLPVFAIV AFSAILPLMT VVNYSVQDTF GNNQFFWNGV GWFKELLDPS
TDLGGRFFAS LWRNLAFSAI ILAIEVPLGI VVALAMPRHG WSVAFCLVIM ALPLLIPWNV
VGTIWQIFGR PDIGLMGYTL NHLGFNYNYV SNDFDAWATV VVMDVWHWTS LVALLCYAGL
KSIPDAYYQA AQIDGASRWA VFKAIQLPKM HRVLLIAVLL RFMDSFMIYT EPFVVTGGGP
GNSTTFISIE LVKIALGQFD LGKAAALSIV YNLIIIIVCW VFYTVMTNAG NERRQAEGSM
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