Gene Bphyt_5637 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5637 
Symbol 
ID6279332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1840504 
End bp1841460 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content58% 
IMG OID642616711 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001889354 
Protein GI187920323 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGCAA ACAAGCCTTT TTCATCGGCG GGGCTGGAGT CGCGGGCGTC GGCTCGTGCA 
CGCACGCGTC TGGCCGGGTT ATCGGACAGA ACCATTGCGT GGCTGTTCAT CCTTCCAACA
GTCCTGCTGC TGCTCGCGAT CAACATCTTT CCGTTGATCT GGGCGCTACG TCTGTCGTTC
ACGAACTTCA AGTCGAATAT GCCGAGTGTG CCGGCGCGCT TTGTCGGCAT CGACAATTAC
GTCGACATTC TCACCGACGA AGACATCTGG TACGCGATGC AGGTGACGGC GCGTTTCGTG
TTCTGGTCGG TCGGGCTAGA GGTTCTACTG GGTTTCGGCC TCGCGTTGCT GATCAACCGG
CAGTTTCGCG GTCATAGTTT CTGGACCACG CTGATCCTGC TGCCGATGAT GCTGTCACCG
GCAGTCGTGG GCAACTTCTG GACCTTTCTG CTGCAACCGC AAACGGGCCT CTTCAACGAT
ATCGTCGGCT TCTTCACCGG CATTGCGCCC GGCTCATTTC AGATGATCGG CGACGTGTCG
CTCGCGCCGT GGACCATCGT GATGGTCGAT ACGTGGATGT GGACCCCCTA TGTGATGCTC
ATCTGCCTCG CGGGCCTGCG GTCGATTCCC GACTACATCT ACGAAGCGGC CGAAGTGGAT
CGCGCCACAC CATGGCGGCA GTTCTGGTCG ATCACATTGC CGATGACCTT GCCGTTCCTG
ATGCTCGCCG TGCTGTTTCG CGGCATCGAG AACTTCAAGA TGTTCGACAT GGTTAACCTG
CTGACTTCCG GTGGTCCGGG TTCGGTCACC GAAACCGTGT CGATCACCTT GAAGCGTGCC
GCGTTCGAGA AATGGCAGAC GGGCTATTCA TCGGCTTTGG CGATCATTCT GTTCGTGACG
GTGTTCGGTG CGGCGAACAT CTACGTCAAG GCGCTCAACC GGGTGAAACA GCGATGA
 
Protein sequence
MLANKPFSSA GLESRASARA RTRLAGLSDR TIAWLFILPT VLLLLAINIF PLIWALRLSF 
TNFKSNMPSV PARFVGIDNY VDILTDEDIW YAMQVTARFV FWSVGLEVLL GFGLALLINR
QFRGHSFWTT LILLPMMLSP AVVGNFWTFL LQPQTGLFND IVGFFTGIAP GSFQMIGDVS
LAPWTIVMVD TWMWTPYVML ICLAGLRSIP DYIYEAAEVD RATPWRQFWS ITLPMTLPFL
MLAVLFRGIE NFKMFDMVNL LTSGGPGSVT ETVSITLKRA AFEKWQTGYS SALAIILFVT
VFGAANIYVK ALNRVKQR