| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3130 |
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| Symbol | ugpA2 |
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| ID | 5710982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3298547 |
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| End bp | 3299410 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641269057 |
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| Product | sugar ABC transporter |
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| Protein accession | YP_001534464 |
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| Protein GI | 159045670 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.199935 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCG AAAACCAGAA AGCCTGGTTC TTCGTGCTGC CGGTCCTGTT CCTTGTGGCC
TTCAACGCAC TCGTGCCGAT GATGACCGTG GTCAACTACT CGGTGCAGGA AACCTTCGGC
AACAACACCT TCTTCTGGCA GGGCCTGGAT TGGTTCGAGC AGATCCTCCG CTCCGACCGC
TTCCAGGCCG CCTTGGGACG CCAGTTCATG TTCACCGCGA TCATCCTGGC GATCGAGATC
CCGCTGGGCA TCATCGTGGC CCTGTCCATG CCGCGCAAGG GGATCTGGGT GCCCGTCTGC
CTCGTGCTGA TGGCGCTGCC GATGCTGATC CCGTGGAACG TGGTGGGCGC GATGTGGAAC
ATCTTCGCCC TGCCCAAGAT CGGGATGCTG GGGTACTTCA TGAACGATGT GCTGGGCGTG
CATTACGACA TGACCCAGGA CCCGCTGGCG GCCTGGATCA CCGTGATCGT CATGGATGTG
TGGCACTGGA CCTCGCTGGT GGTGCTGCTG TGCTACGCGG GCCTGGTGTC GATCCCCGAC
GCCTACTACC AGGCGGCCAA GATCGACGGC GCCTCGCCCT GGGCCGTGTT CCGCTACATC
CAGTTGCCCA AGATGAAGAC CGTGCTGACC ATCGCGATCC TGCTGCGCTT CATGGACAGC
TTCAACATCT ACACCGAACC CTTCGTGCTC ACCGGCGGGG GGCCGGGCAA CTCCACCACG
CTGCTGTCCA TCGACCTGGT GAAGATCGCC CTGGGGCAGT TCGACCTCGG CCCGGCGGCG
GCCATGAGCC TGATCTACTT CGCCATCACC CTGCTGGTGA GCTGGGTCTT CTACACCCTG
ATGACCAAGG ATGACCCGAA ATGA
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| Protein sequence | MKTENQKAWF FVLPVLFLVA FNALVPMMTV VNYSVQETFG NNTFFWQGLD WFEQILRSDR
FQAALGRQFM FTAIILAIEI PLGIIVALSM PRKGIWVPVC LVLMALPMLI PWNVVGAMWN
IFALPKIGML GYFMNDVLGV HYDMTQDPLA AWITVIVMDV WHWTSLVVLL CYAGLVSIPD
AYYQAAKIDG ASPWAVFRYI QLPKMKTVLT IAILLRFMDS FNIYTEPFVL TGGGPGNSTT
LLSIDLVKIA LGQFDLGPAA AMSLIYFAIT LLVSWVFYTL MTKDDPK
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