Gene Rsph17029_1324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_1324 
Symbol 
ID4896697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp1371390 
End bp1372262 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content63% 
IMG OID640111911 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001043206 
Protein GI126462092 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAAGA GCTGGAACAA CCGCGCCTGG TTCCTCGTGC TGCCGGTGCT GGCGCTCGTG 
GCCTTCTCGG CCGTCGTGCC GCTGATGACA GTTGTCAACT ATTCGGTGCA GGACACGTTC
GGGAATAACG AGTTCTTCTG GGCCGGCCTC GAATGGTTCG AGGAGACCGT CACCTCCGAG
CGCATCCATG CCGCCCTCGG GCGTCAGGTG CTCTTCACCG CGATCATCCT TGCCATCGAG
GTGCCGCTCG GGATCTTCGT GGCGCTCCAT ATGCCGAAGA AGGGCTTCTG GGCCAGCCTC
TGCCTGATCC TGATGGCGAT GCCGCTTCTG ATCCCCTTCA ACGTGGTGGG CACGATCTGG
CAGATCTTCG GCCGGGTGGA CATCGGCCTT CTGGGCCGCA CGCTGACTGC GCTCGGGGTC
GACTACAATT ACACGAACGA CTGGCTCGAT GCCTGGGTCA CGGTCATCGT GATGGATGTC
TGGCACTGGA CCTCGCTGGT GGCGCTCCTC TGCTACGCCG GGCTGCAATC CATCCCCGAG
GCCTACTATC AGGCAGCCAA GATCGATCAG GCCAGCCGCT GGGCCGTGTT CCGCTACATC
GAGCTGCCGA AGATGCGGGG CGTGCTGCTG ATCGCGGTGC TGCTGCGCTT CATGGACAGT
TTCATGATCT ATACCGAGCC CTTCGTGGTG ACGGGCGGCG GCCCCGGCAA CTCGACCACC
TTCCTCTCGA TCGATCTCGT GAAGATGGCC ATCGGCCAGT TCGACCTCGG CCCCGCCGCC
GCCTTCTCGA TCATCTACTT CCTCGTCATC CTGCTGATCT CGTGGGTGTT CTACACCGTG
ATGACCAACC TCGACCGGGA GGACCGCCCG TGA
 
Protein sequence
MEKSWNNRAW FLVLPVLALV AFSAVVPLMT VVNYSVQDTF GNNEFFWAGL EWFEETVTSE 
RIHAALGRQV LFTAIILAIE VPLGIFVALH MPKKGFWASL CLILMAMPLL IPFNVVGTIW
QIFGRVDIGL LGRTLTALGV DYNYTNDWLD AWVTVIVMDV WHWTSLVALL CYAGLQSIPE
AYYQAAKIDQ ASRWAVFRYI ELPKMRGVLL IAVLLRFMDS FMIYTEPFVV TGGGPGNSTT
FLSIDLVKMA IGQFDLGPAA AFSIIYFLVI LLISWVFYTV MTNLDREDRP