| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3394 |
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| Symbol | |
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| ID | 7970632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3573796 |
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| End bp | 3574686 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644793978 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_002945277 |
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| Protein GI | 239816367 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.391737 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCTA CGAACAAGCC CATCAACCAA AAGGCCTGGT GGCTCGTGCT GCCGGTGCTG
ATCTGCGTGG CCTTCTCGGC CATCGTGCCG CTGATGACGG TGGTCAACTA TTCGGTGCAG
GACATCATCT CGCCCGACCG GCGCGTGTTC GTCGGCACCG AGTGGTTCGC CTCGGTGATG
CGCGACGACG AGCTGCACCA GGCGCTGTGG CGCCAGCTGG GCTTTTCGCT GTCGGTGCTG
CTGGTGGAGA TTCCGCTGGG TATCTGCCTG GCGCTGTCGA TGCCGGCCAA GGGTTGGAAG
TCTTCGGCGG TGCTGGTGGT GGTGGCGCTG TCGCTGCTGA TTCCCTGGAA CGTGGTCGGC
ACCATCTGGC AGATCTACGG CCGCGCCGAC ATCGGCCTGC TGGGCCATGC GCTGCAGAAG
CTGGGCATCG ACTACAACTA CACGGGCAGC GCGGCGGACG CGTGGCTCAC GGTGCTGGTG
ATGGACGTGT GGCACTGGAC GCCGCTGGTG GCGCTGCTGT GCTTTGCCGG CCTGCGCTCG
ATTCCCGACG CCTACTACCA GGCCGCGCGC ATCGACGGCG CGAGCAAGTT CGCGGTGTTC
CGCTACATCC AGCTGCCGAA GATGCGCGGC GTGCTGATGA TCGCGGTGCT GCTGCGCTTC
ATGGACAGCT TCATGATCTA CACCGAGCCC TTCGTCCTGA CGGGCGGCGG GCCGGGCAAC
GCCACCACCT TCCTGAGCCA GTACCTCACG CAGAAGGCCG TGGGGCAGTT CGACCTGGGG
CCGGCGGCTG CTTTCTCGCT GATCTATTTC CTGATCATCC TGTTGTTCTG CTTCGTGCTC
TACAACTGGA TGCAGCGGGT CGGGACGCAG GAAGCGGAGG TCGAAAAATG A
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| Protein sequence | MNATNKPINQ KAWWLVLPVL ICVAFSAIVP LMTVVNYSVQ DIISPDRRVF VGTEWFASVM
RDDELHQALW RQLGFSLSVL LVEIPLGICL ALSMPAKGWK SSAVLVVVAL SLLIPWNVVG
TIWQIYGRAD IGLLGHALQK LGIDYNYTGS AADAWLTVLV MDVWHWTPLV ALLCFAGLRS
IPDAYYQAAR IDGASKFAVF RYIQLPKMRG VLMIAVLLRF MDSFMIYTEP FVLTGGGPGN
ATTFLSQYLT QKAVGQFDLG PAAAFSLIYF LIILLFCFVL YNWMQRVGTQ EAEVEK
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