Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_0378 |
Symbol | |
ID | 5368926 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | - |
Start bp | 436578 |
End bp | 437447 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640802716 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001339251 |
Protein GI | 152994416 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.374206 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAACTA AAGTTGAAAA CAATAAGGCG TGGTTCCTTG TTCTACCTGT TTTTCTCATC GTAGCTTTCT CCGCCATCAT TCCTCTAATG ACAGTGGTGA ACTATTCGGT GCAGGATATT TTTGATCCAT ATACTCGCTA CTTTGTTGGT ACAGAATGGT TCAAGCAAGT GATGCTAGAC AGCCGCTTGC ACGAAGCTTT GCTGCGCCAA TTCATCTATT CCTTCACCAT TCTGATCATT GAAGTGCCAT TGGGTATTTG CGTGGCCTTG ATGATGCCAA CCAAAGGTCG TGGCGCATCT TTGGCTTTGA TCTTGGTGGC GATTCCCCTG CTAATTCCAT GGAACGTGGT AGGCACCATT TGGCAAATCT TTGGTCGTGC GGACATCGGG TTATTTGGTG CCTTCATGAG CAGTATTGGT GTCGATTACA ACTACGCATC TGACCCTACC GATGCTTGGT TAACCGTGGT CTTGATGGAC GTGTGGCACT GGACACCTTT GGTTGCCTTG CTGTGCTACT CCGGTCTACG AGCGATCCCT GAAGTTTATT ATCAAGCAGC ACGAATCGAC CAAGCATCAC GCTGGGCCGT GTTCCGCTAT ATCCAGCTTC CTAAACTGAC TAACGTACTG ATTATTGGTG TGTTATTGCG CTTTATGGAT TCGTTCATGA TTTACACAGA GCCGTTTGTA CTAACGGGGG GCGGCCCAGG TAGTTCTACC ACCTTCTTGA GTCAGTCCTT GGTACAGCAA GCCATCGGTC AGTTTGACCT TGGTCCTGCA GCGGCTTTCT CGCTGGTGTA TTTCTTAATC ATCTTGCTCG TGTGTTGGGT GTTCTACACC ACCATCATGA ACATGCAAAA AGACAAATAG
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Protein sequence | MQTKVENNKA WFLVLPVFLI VAFSAIIPLM TVVNYSVQDI FDPYTRYFVG TEWFKQVMLD SRLHEALLRQ FIYSFTILII EVPLGICVAL MMPTKGRGAS LALILVAIPL LIPWNVVGTI WQIFGRADIG LFGAFMSSIG VDYNYASDPT DAWLTVVLMD VWHWTPLVAL LCYSGLRAIP EVYYQAARID QASRWAVFRY IQLPKLTNVL IIGVLLRFMD SFMIYTEPFV LTGGGPGSST TFLSQSLVQQ AIGQFDLGPA AAFSLVYFLI ILLVCWVFYT TIMNMQKDK
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