Gene Mmwyl1_0378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmwyl1_0378 
Symbol 
ID5368926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinomonas sp. MWYL1 
KingdomBacteria 
Replicon accessionNC_009654 
Strand
Start bp436578 
End bp437447 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content47% 
IMG OID640802716 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001339251 
Protein GI152994416 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.374206 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACTA AAGTTGAAAA CAATAAGGCG TGGTTCCTTG TTCTACCTGT TTTTCTCATC 
GTAGCTTTCT CCGCCATCAT TCCTCTAATG ACAGTGGTGA ACTATTCGGT GCAGGATATT
TTTGATCCAT ATACTCGCTA CTTTGTTGGT ACAGAATGGT TCAAGCAAGT GATGCTAGAC
AGCCGCTTGC ACGAAGCTTT GCTGCGCCAA TTCATCTATT CCTTCACCAT TCTGATCATT
GAAGTGCCAT TGGGTATTTG CGTGGCCTTG ATGATGCCAA CCAAAGGTCG TGGCGCATCT
TTGGCTTTGA TCTTGGTGGC GATTCCCCTG CTAATTCCAT GGAACGTGGT AGGCACCATT
TGGCAAATCT TTGGTCGTGC GGACATCGGG TTATTTGGTG CCTTCATGAG CAGTATTGGT
GTCGATTACA ACTACGCATC TGACCCTACC GATGCTTGGT TAACCGTGGT CTTGATGGAC
GTGTGGCACT GGACACCTTT GGTTGCCTTG CTGTGCTACT CCGGTCTACG AGCGATCCCT
GAAGTTTATT ATCAAGCAGC ACGAATCGAC CAAGCATCAC GCTGGGCCGT GTTCCGCTAT
ATCCAGCTTC CTAAACTGAC TAACGTACTG ATTATTGGTG TGTTATTGCG CTTTATGGAT
TCGTTCATGA TTTACACAGA GCCGTTTGTA CTAACGGGGG GCGGCCCAGG TAGTTCTACC
ACCTTCTTGA GTCAGTCCTT GGTACAGCAA GCCATCGGTC AGTTTGACCT TGGTCCTGCA
GCGGCTTTCT CGCTGGTGTA TTTCTTAATC ATCTTGCTCG TGTGTTGGGT GTTCTACACC
ACCATCATGA ACATGCAAAA AGACAAATAG
 
Protein sequence
MQTKVENNKA WFLVLPVFLI VAFSAIIPLM TVVNYSVQDI FDPYTRYFVG TEWFKQVMLD 
SRLHEALLRQ FIYSFTILII EVPLGICVAL MMPTKGRGAS LALILVAIPL LIPWNVVGTI
WQIFGRADIG LFGAFMSSIG VDYNYASDPT DAWLTVVLMD VWHWTPLVAL LCYSGLRAIP
EVYYQAARID QASRWAVFRY IQLPKLTNVL IIGVLLRFMD SFMIYTEPFV LTGGGPGSST
TFLSQSLVQQ AIGQFDLGPA AAFSLVYFLI ILLVCWVFYT TIMNMQKDK