Gene Rleg_5980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5980 
Symbol 
ID8016338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012852 
Strand
Start bp9401 
End bp10267 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content54% 
IMG OID644827292 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002978492 
Protein GI241258608 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAAA CCTGGAACAA CAAAGCGTGG TTTCTGGTCT TGCCGGTCCT TGTGCTGGTG 
GCATTCTCGG CCGTCATTCC CTTGATGACG GTTGTGAACT ATTCCGTTCA GGACACTTTC
GGAAACAACC AGTTCTTCTG GAACGGAACT GACTGGTTTA CGGAAATCCT GCATTCCGAC
CGATTCTGGG CCGCCCTACA GCGAAACCTG ATTTTTTCGT TGATCATTCT CGCTCTTGAG
ATCCCGCTCG GTATCTTCAT TGCGCTCAAC ATGCCGAAAT CGGGCATCGG CGTGCCGGTG
TGCCTGGTTC TGATGGCGCT ACCACTGCTG ATCCCGTGGA ACGTTGTCGG CACGATCTGG
CAGGTGTTCG GCCGCAACGA CATTGGTTTG TTTGGCTATT ACATCAATGC CATCGGCATC
GATTACAACT ATGTGCAGGA TCCGTTCGAC GCCTGGGTGA CGATCATCAT CATGGATGTC
TGGCACTGGA CGAGCCTGGT CGTCTTGCTT TGCTATGCAG GCCTCGTTTC CATTCCGGAT
GCTTTCTATC AGGCAGCCAA GATCGACGGT GCGTCTCGTT GGGCCGTGTT CCGCTATATC
CAGCTGCCAA AGATGAAGCG CGTTCTTCTG ATCGCCGTGC TGCTGCGTTT CATGGATAGT
TTCATGATCT ACACCGAGCC TTTTGTCGTC ACTGGTGGCG GTCCCGGCAA CGCGACCACT
TTCCTGTCGA TCGATCTGGT CAAGACCGCC CTCGGACAGT TTGACCTCGG TCCGGCCGCT
GCCATGTCGC TGGTCTATTT CCTGATCATC CTGCTGCTTT CGTGGGTGTT CTACACCGTC
ATGACAAGCC ACGACGCGGA GAATTGA
 
Protein sequence
MEKTWNNKAW FLVLPVLVLV AFSAVIPLMT VVNYSVQDTF GNNQFFWNGT DWFTEILHSD 
RFWAALQRNL IFSLIILALE IPLGIFIALN MPKSGIGVPV CLVLMALPLL IPWNVVGTIW
QVFGRNDIGL FGYYINAIGI DYNYVQDPFD AWVTIIIMDV WHWTSLVVLL CYAGLVSIPD
AFYQAAKIDG ASRWAVFRYI QLPKMKRVLL IAVLLRFMDS FMIYTEPFVV TGGGPGNATT
FLSIDLVKTA LGQFDLGPAA AMSLVYFLII LLLSWVFYTV MTSHDAEN