Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_5980 |
Symbol | |
ID | 8016338 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012852 |
Strand | - |
Start bp | 9401 |
End bp | 10267 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644827292 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_002978492 |
Protein GI | 241258608 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAAAA CCTGGAACAA CAAAGCGTGG TTTCTGGTCT TGCCGGTCCT TGTGCTGGTG GCATTCTCGG CCGTCATTCC CTTGATGACG GTTGTGAACT ATTCCGTTCA GGACACTTTC GGAAACAACC AGTTCTTCTG GAACGGAACT GACTGGTTTA CGGAAATCCT GCATTCCGAC CGATTCTGGG CCGCCCTACA GCGAAACCTG ATTTTTTCGT TGATCATTCT CGCTCTTGAG ATCCCGCTCG GTATCTTCAT TGCGCTCAAC ATGCCGAAAT CGGGCATCGG CGTGCCGGTG TGCCTGGTTC TGATGGCGCT ACCACTGCTG ATCCCGTGGA ACGTTGTCGG CACGATCTGG CAGGTGTTCG GCCGCAACGA CATTGGTTTG TTTGGCTATT ACATCAATGC CATCGGCATC GATTACAACT ATGTGCAGGA TCCGTTCGAC GCCTGGGTGA CGATCATCAT CATGGATGTC TGGCACTGGA CGAGCCTGGT CGTCTTGCTT TGCTATGCAG GCCTCGTTTC CATTCCGGAT GCTTTCTATC AGGCAGCCAA GATCGACGGT GCGTCTCGTT GGGCCGTGTT CCGCTATATC CAGCTGCCAA AGATGAAGCG CGTTCTTCTG ATCGCCGTGC TGCTGCGTTT CATGGATAGT TTCATGATCT ACACCGAGCC TTTTGTCGTC ACTGGTGGCG GTCCCGGCAA CGCGACCACT TTCCTGTCGA TCGATCTGGT CAAGACCGCC CTCGGACAGT TTGACCTCGG TCCGGCCGCT GCCATGTCGC TGGTCTATTT CCTGATCATC CTGCTGCTTT CGTGGGTGTT CTACACCGTC ATGACAAGCC ACGACGCGGA GAATTGA
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Protein sequence | MEKTWNNKAW FLVLPVLVLV AFSAVIPLMT VVNYSVQDTF GNNQFFWNGT DWFTEILHSD RFWAALQRNL IFSLIILALE IPLGIFIALN MPKSGIGVPV CLVLMALPLL IPWNVVGTIW QVFGRNDIGL FGYYINAIGI DYNYVQDPFD AWVTIIIMDV WHWTSLVVLL CYAGLVSIPD AFYQAAKIDG ASRWAVFRYI QLPKMKRVLL IAVLLRFMDS FMIYTEPFVV TGGGPGNATT FLSIDLVKTA LGQFDLGPAA AMSLVYFLII LLLSWVFYTV MTSHDAEN
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