| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1364 |
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| Symbol | |
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| ID | 3972460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1488998 |
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| End bp | 1489900 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637924479 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_531245 |
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| Protein GI | 90422875 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.641446 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACAAGA CCGTCAACCA GAAAGCCTGG TTCCTGGTGC TGCCGGTGTT CGCCATCGTG
GCGTTCTCGG CGATCCTGCC GCTGATGACG GTGGTGAACT ATTCGGTGCA GGACACTTTC
GGCAACAACC AGTTCTTCTG GAACGGGGTC GGCTGGTTCA AGGAATTGCT CGACCCTAAC
AGCGACCTCG GCGAGCGGTT CTTCGCCTCG CTGGCGCGCA ACCTGGCGTT CTCGGCGATC
ATCCTCGCCA TCGAAGTGCC GCTCGGCATC GTGGTGGCGC TGGCGATGCC GCGCCATGGC
TGGACGGTGG CGCTGTGCCT GGTGATCATG GCGCTGCCGC TGTTGATCCC GTGGAATGTG
GTCGGCACCA TCTGGCAGAT CTTCGGCCGG CCCGACATCG GCCTGTTGGG CTATTCGCTG
AACGGGCTCG GCATCGATTA CAACTACGTC TCCAACGCGT TCGACGCCTG GGCCACCGTG
GTGGTGATGG ACGTCTGGCA CTGGACCAGC CTGGTGGCGC TGTTGTGCTA CGCCGGGCTG
AAATCGATCC CCGACGCCTA TTATCAGGCG GCGCAGATCG ACGGCGCCTC GCGCTGGGCG
GTGTTCACCG CGATCCAGCT GCCGAAGATG CACCGCGTGC TGTTGATCGC GGTGCTGCTG
CGCTTCATGG ACAGTTTCAT GATCTACACC GAACCCTTCG TGGTGACCGG CGGCGGGCCG
GGCAACTCGA CCACCTTCGT GTCGATCGAG CTGGTCAAGA TCGCGCTCGG CCAGTTCGAC
CTCGGCAAGG CCGCGGCGCT GTCGATCGTC TACAACCTGA TCATCATCAT CGTCTGCTGG
GTGTTCTACA CGGTGATGAC CAATGTGGGC TCCGGCCGCG ACACCAACCC GGAGGGCGCA
TGA
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| Protein sequence | MDKTVNQKAW FLVLPVFAIV AFSAILPLMT VVNYSVQDTF GNNQFFWNGV GWFKELLDPN
SDLGERFFAS LARNLAFSAI ILAIEVPLGI VVALAMPRHG WTVALCLVIM ALPLLIPWNV
VGTIWQIFGR PDIGLLGYSL NGLGIDYNYV SNAFDAWATV VVMDVWHWTS LVALLCYAGL
KSIPDAYYQA AQIDGASRWA VFTAIQLPKM HRVLLIAVLL RFMDSFMIYT EPFVVTGGGP
GNSTTFVSIE LVKIALGQFD LGKAAALSIV YNLIIIIVCW VFYTVMTNVG SGRDTNPEGA
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