Gene Dbac_1442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1442 
Symbol 
ID8377107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp1633093 
End bp1633962 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content60% 
IMG OID645000666 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003157952 
Protein GI256829224 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0523794 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAAAAAT GGGAAAACAA CAGGGCCTGG TTTCTTATCC TGCCCGTCTT CGTCATCGTG 
GCTTTCAGCG CCATCATCCC GCTGATGACC GTGGTCAACT ATTCGGTTCA GGACATCCTT
GGGCCCGGTC AGAGCATTTT TGTCGGCACG GAATGGTTTC GCGAGATGCT GACCAATTCC
CGCCTGCATG ACGCGCTCGT CAAACAGCTC ATCTTTTCGG GCCTGGTCCT TCTGATCGAG
ATTCCGCTCG GCATCGCCAT CGCCCTGACC ATGCCGGCCA AGGGCTGGAC CGCTTCAGCC
TGCCTGGTGC TCCTGGCCTT GCCGCTGCTC ATTCCCTGGA ACGTCATCGG GACCATCTGG
ATCATCTTCA CCCGGCCTGA CATCGGCCTC TTCGGGGCGA CCATCAACAG TCTGGGGCTG
AGCTTCGACC ACACCGCCAA TCCCCTGCAT GCCTGGATCA CGGTCATGCT CATGGAGGTC
TGGCACTGGA CGCCGCTGGT GGTTCTGCTG GCCTACGCGG GTCTGCGCTC CATCCCCGAC
GCCTACTATC AGGCGGCAAA GATCGACGGG GCCAGCCGCT GGGCCGTGTT CCGCTTCATC
CAGCTCCCGA AGATGCGCGG GGTGCTGACC ATCGCGGTGC TGCTCCGCTT CATGGACAGC
TTCCTGATCT ATGCCGAACC CTTTGTGCTG ACCGGCGGCG GACCCGGCAA CGCCACAACC
TTTCTGTCCA TCTATCTGGT CAAGCTCTCG ACGGCCATGG ATCTCGGGCC GGCCGCGGCC
TTCTCCATCA TCTACTTCCT TATTGTCCTG CTTTTCTGCT GGCTTTTCTA TCAGGCTCTG
CAGGCCGTGG GCACGGGAGA CAAGTCATGA
 
Protein sequence
MEKWENNRAW FLILPVFVIV AFSAIIPLMT VVNYSVQDIL GPGQSIFVGT EWFREMLTNS 
RLHDALVKQL IFSGLVLLIE IPLGIAIALT MPAKGWTASA CLVLLALPLL IPWNVIGTIW
IIFTRPDIGL FGATINSLGL SFDHTANPLH AWITVMLMEV WHWTPLVVLL AYAGLRSIPD
AYYQAAKIDG ASRWAVFRFI QLPKMRGVLT IAVLLRFMDS FLIYAEPFVL TGGGPGNATT
FLSIYLVKLS TAMDLGPAAA FSIIYFLIVL LFCWLFYQAL QAVGTGDKS