Gene Noca_3682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3682 
Symbol 
ID4595794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp3904792 
End bp3905643 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content62% 
IMG OID639778290 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_924869 
Protein GI119717904 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTGTCC GAATCCGCAT GATGCTGCCA TTGGTGGTGG TGCTGGCCGC CGTGGTCGGG 
TACCCGCTCG CCTATAGCTT CTACCTCTCC CTCACGGACT ACAAGATCAC CAGCCGGGGG
GACGTAGCCT TCCGTGGCCT GGAGCAGTAC GACAATGCAC TGAACGATCC TGACTACGTC
CAAGCGCTGC TTACGACCGG GACGTTCGTC GTCTCCGCGG TCGTGCTCGA GCTTGCTATC
GGCATGCTAT TGGCACTCGC GCTGCAGCAG CAACGGTGGG TCCGCAACCT CAGTCGCTCG
TTCCTGCTCG CGCCGATGTT CATCACCCCG ATCGCCGTCG GTCTGATGTT CCGCTTCCTG
CTCAACAGCC AGTTGGGGGC GATCCCGTCG CTCCTGAACG GGCTGGGCGT CTCCATGGAC
TTCTTCGGCA GTGGTACGGC GCTGTGGACC ATCGTGGCCA TTGACGTCTG GCAGTGGACT
CCTTTCATGA TGCTGATGTT GCTCGCCGGC TTGGAGGGAC TACCGAAGCA GCCATTCGAG
GCGGCCCGGG TCGATGGTGC CAGCGCGCTG TTCACGTTCC GCAAAGTCAC GATTCCGCTG
TTGCGACCTG TCATTGTCGT CGCAGTTCTG ATCCGCAGCT TGGACGCGCT CAAGGTGTTC
GAGTACGTAT ACGCCACTAC TCGCGGCGGG CCGGGAACCG AGACGCAGAC CATTCAGTAC
CTGATCTACA ACACTGGCAT CACCTTCTTC CGTCTCGCCT CAGCCTCTGC GATGGCCTAC
CTGTTGCTGG CCGCCGTGGT GGTGCTCGCG GTTCTCCTGT TCGCCCGGAT TCGACGAGGA
GGAGTCCTAT GA
 
Protein sequence
MSVRIRMMLP LVVVLAAVVG YPLAYSFYLS LTDYKITSRG DVAFRGLEQY DNALNDPDYV 
QALLTTGTFV VSAVVLELAI GMLLALALQQ QRWVRNLSRS FLLAPMFITP IAVGLMFRFL
LNSQLGAIPS LLNGLGVSMD FFGSGTALWT IVAIDVWQWT PFMMLMLLAG LEGLPKQPFE
AARVDGASAL FTFRKVTIPL LRPVIVVAVL IRSLDALKVF EYVYATTRGG PGTETQTIQY
LIYNTGITFF RLASASAMAY LLLAAVVVLA VLLFARIRRG GVL