Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_3682 |
Symbol | |
ID | 4595794 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 3904792 |
End bp | 3905643 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639778290 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_924869 |
Protein GI | 119717904 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGTGTCC GAATCCGCAT GATGCTGCCA TTGGTGGTGG TGCTGGCCGC CGTGGTCGGG TACCCGCTCG CCTATAGCTT CTACCTCTCC CTCACGGACT ACAAGATCAC CAGCCGGGGG GACGTAGCCT TCCGTGGCCT GGAGCAGTAC GACAATGCAC TGAACGATCC TGACTACGTC CAAGCGCTGC TTACGACCGG GACGTTCGTC GTCTCCGCGG TCGTGCTCGA GCTTGCTATC GGCATGCTAT TGGCACTCGC GCTGCAGCAG CAACGGTGGG TCCGCAACCT CAGTCGCTCG TTCCTGCTCG CGCCGATGTT CATCACCCCG ATCGCCGTCG GTCTGATGTT CCGCTTCCTG CTCAACAGCC AGTTGGGGGC GATCCCGTCG CTCCTGAACG GGCTGGGCGT CTCCATGGAC TTCTTCGGCA GTGGTACGGC GCTGTGGACC ATCGTGGCCA TTGACGTCTG GCAGTGGACT CCTTTCATGA TGCTGATGTT GCTCGCCGGC TTGGAGGGAC TACCGAAGCA GCCATTCGAG GCGGCCCGGG TCGATGGTGC CAGCGCGCTG TTCACGTTCC GCAAAGTCAC GATTCCGCTG TTGCGACCTG TCATTGTCGT CGCAGTTCTG ATCCGCAGCT TGGACGCGCT CAAGGTGTTC GAGTACGTAT ACGCCACTAC TCGCGGCGGG CCGGGAACCG AGACGCAGAC CATTCAGTAC CTGATCTACA ACACTGGCAT CACCTTCTTC CGTCTCGCCT CAGCCTCTGC GATGGCCTAC CTGTTGCTGG CCGCCGTGGT GGTGCTCGCG GTTCTCCTGT TCGCCCGGAT TCGACGAGGA GGAGTCCTAT GA
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Protein sequence | MSVRIRMMLP LVVVLAAVVG YPLAYSFYLS LTDYKITSRG DVAFRGLEQY DNALNDPDYV QALLTTGTFV VSAVVLELAI GMLLALALQQ QRWVRNLSRS FLLAPMFITP IAVGLMFRFL LNSQLGAIPS LLNGLGVSMD FFGSGTALWT IVAIDVWQWT PFMMLMLLAG LEGLPKQPFE AARVDGASAL FTFRKVTIPL LRPVIVVAVL IRSLDALKVF EYVYATTRGG PGTETQTIQY LIYNTGITFF RLASASAMAY LLLAAVVVLA VLLFARIRRG GVL
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