| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3048 |
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| Symbol | |
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| ID | 1221911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 3285439 |
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| End bp | 3286329 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637239465 |
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| Product | sugar-phosphate transmembrane ABC transporter protein |
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| Protein accession | NP_521169 |
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| Protein GI | 17547767 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.071315 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAGC CGCTCAACAA CAAGGCGTGG TTCCTGATCC TGCCGGTGTT CCTGTGCGTG
GCGTTCTCCG CCATCCTGCC GCTGATGACG GTGGTCAACT ATTCGGTGCA GGACATCATC
AGCCCCGAGC AGCACGTGTT CGTCGGCGTG GACTGGTTCC GCCAGATTCT GCGCGACGGT
GACCTGCAGG ACGCGCTGAC ACGCCAGCTG ATCTTCTCGC TGTGCGTGCT GGGGGTGGAG
ATTCCGCTGG GCATCGGTCT GGCGCTGGCG ATGCCGAGCA AGGGCTGGAA GGCATCCGCC
GCGCTGGTGA TCCTGGCCAT GCCGCTGCTG ATTCCCTGGA ACGTGGTCGG CACGATCTGG
CAGATCTTCG GGCGCTCGGA CATCGGCCTG GCCGGCTACT GGCTCAACCG GCTGGGCGTG
GACTACAGCT ACACCTCGCA CCCGTTCGAC GCGTGGATCA CGGTGCTGAT CATGGACGTC
TGGCACTGGA CGCCGCTGGT GGCGCTGCTG GCCTATGCCG GCCTGCGCTC GATCCCGGAT
GCGTTCTACC AGGCGGCCGA GATCGACGGC GCCAGCCGGC TGGCGGTGTT CCGCTACATC
CAGCTGCCGA AGATGCGCGG CGTGCTGATG ATCGGCGTGC TGCTGCGCTT CATGGACAGC
TTCATGATCT ACACCGAGCC GTTCGTGCTG ACCGGCGGCG GCCCCGGCAA CGCCACCACG
TTCCTGTCGC AATACCTGAC GCAGAAGGCG GTGGGCCAGT TCGACCTGGG CCCGGCGGCG
GCCTTCTCGA TCGTGTACTT CCTCATCATC CTGCTGTTCT GCTTCGTCCT CTATAACTGG
ATGCAGCGCG TGGGCAGCGC CAGCACGGCC GCGGGAGACG ACCATGCGTA A
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| Protein sequence | MNKPLNNKAW FLILPVFLCV AFSAILPLMT VVNYSVQDII SPEQHVFVGV DWFRQILRDG
DLQDALTRQL IFSLCVLGVE IPLGIGLALA MPSKGWKASA ALVILAMPLL IPWNVVGTIW
QIFGRSDIGL AGYWLNRLGV DYSYTSHPFD AWITVLIMDV WHWTPLVALL AYAGLRSIPD
AFYQAAEIDG ASRLAVFRYI QLPKMRGVLM IGVLLRFMDS FMIYTEPFVL TGGGPGNATT
FLSQYLTQKA VGQFDLGPAA AFSIVYFLII LLFCFVLYNW MQRVGSASTA AGDDHA
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