| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_5199 |
|---|
| Symbol | |
|---|
| ID | 8007094 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012848 |
|---|
| Strand | + |
|---|
| Start bp | 610493 |
|---|
| End bp | 611431 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644822108 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002973368 |
|---|
| Protein GI | 241113533 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0867066 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTCGA CAAGCATCGA AACGGCCGCA GTGGCCAAGA CCTCGAAAGG AAGGAGCAAA
CCGGATCGGT TTGCTCCCAA CTACTGGCCT TTCGTTATCC CGGCGCTCAT CGTCATTGCG
GCCGTCATCG TTTTTCCATG GGTGTTTACC CTTTGGATGA GCGTCAACAG CTGGACGCTT
GGCCAATCCC AGGTCTTTGC GGGACTGGAC AACTATGCCC GCCTGGTCGT GGACATGCGC
TTCTGGGACT CGCTGTGGCA TACGGTGCTC TATACGACGC TCTCCGTGGT GGCGCCCCTT
TTCCTGGGGA CGCTCGCCGC GCTGATCTTT GATACGCAAT TTCCGCTGCG CGGCCTTCTG
CGTGGCATAT TCGTGATGCC GATGATGGCG ACGCCGGTCG CCATCGCCCT CGTCTGGACG
ATGATGTTCC ACCCGCAGCT CGGCGTCCTC AACTATCTTC TCTCCCTCAT GGGCATCGGC
CCGCAGGAAT GGATCTATAA CCAGAACAGT GTCATCCCAT CGCTGGTGCT GGTCGAGACG
TGGCAATGGA CGCCGCTTAT CATGCTGATC GTGCTCGGTG GTCTGGCGGC GGTTCCGCGC
GAGCCCTATG AAAGTGCCGA AATCGACGGA GCCAATGTCT GGCAGAAATT TCGCTACCTG
ACGCTGCCGA TGATCGCGCC ATTTCTGATG ATTGCCGTGA TGATCCGCAG CATCGATGCG
GTGAAAAGTT TCGACATCAT CTACGCCATG ACCCAAGGCG GCCCGGGCAC GGCGTCGGAA
ACGATCAACA TCTATCTCTA CAACACTGCT TTCGCTTACT ACGATATTGG CTATGGATCT
GCGATGGCGG TTGTCTTCTT CATCCTCATC GTCCTGCTCG CCTTCGTCCT GATGATGCTG
CGGCAGCGCG CGAACTGGTC CGACGGGGAG GCACGCTGA
|
|---|
| Protein sequence | MASTSIETAA VAKTSKGRSK PDRFAPNYWP FVIPALIVIA AVIVFPWVFT LWMSVNSWTL
GQSQVFAGLD NYARLVVDMR FWDSLWHTVL YTTLSVVAPL FLGTLAALIF DTQFPLRGLL
RGIFVMPMMA TPVAIALVWT MMFHPQLGVL NYLLSLMGIG PQEWIYNQNS VIPSLVLVET
WQWTPLIMLI VLGGLAAVPR EPYESAEIDG ANVWQKFRYL TLPMIAPFLM IAVMIRSIDA
VKSFDIIYAM TQGGPGTASE TINIYLYNTA FAYYDIGYGS AMAVVFFILI VLLAFVLMML
RQRANWSDGE AR
|
|---|
| |