| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1895 |
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| Symbol | |
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| ID | 5869680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2133585 |
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| End bp | 2134451 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641547017 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001668134 |
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| Protein GI | 167032903 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.248949 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAACA AGGTGCCGAA CAACAAGGCG TGGTGGCTGG TGCTGCCGGT GTTTCTGCTG
GTGGCATTCA GTGCGGTGGT GCCGATGATG ACGGTGGTCA ACTATTCGGT GCAGGACATC
TTCGACCAGT CCAACCGCTA CTTCGTCGGC GCCGACTGGT ACCGCCAGGT GCTGCGCGAC
CCGGCGCTGC ACGATGCGTT GCTGCGCCAG TTCATCTACT CCGCCTGCGT GCTGCTGATC
GAGATCCCGC TGGGTATCGG CATTGCCCTG ACCATGCCAA CCAAAGGCCG TATGGCCTCG
GTGTGCCTGA TCATCATGGC TATTCCGTTG CTGATTCCGT GGAACGTGGT TGGCACTATC
TGGCAGATTT TCGGCCGTGC CGACATCGGC CTGCTCGGCG CCACCCTGGC CAAGCTTGGG
GTCAGCTACA ACTACGCCGG CGACCCGTTC GACGCCTGGC TCACCGTGCT GGTGATGGAT
GTGTGGCACT GGACCTCGTT GGTGGCGTTG CTGTGCTATT CGGGGCTGCG TGCCATCCCC
GACGTGTACT ACCAGGCCGC GCGCATCGAC CGTGCCTCGG GCTGGGCCGT GTTCCGCCAT
ATCCAACTGC CCAAGCTGAA GAACGTGCTG CTGATCGCGG TGATGCTGCG CTTCATGGAC
AGCTTCATGA TCTACACAGA GCCATTCGTG CTGACCGGTG GTGGGCCTGG CAACGCGACC
ACGTTCCTCA GCCAGACCCT CACACGCATG GCCGTGGGGC AGTTCGACCT GGGCCCGGCA
GCGGCGTTCT CGCTGGTGTA CTTCCTGATC ATCCTGCTGG TGTCGTGGCT GTTCTACACA
GCCATGACCC ATGCCGACAA GGACTAG
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| Protein sequence | MINKVPNNKA WWLVLPVFLL VAFSAVVPMM TVVNYSVQDI FDQSNRYFVG ADWYRQVLRD
PALHDALLRQ FIYSACVLLI EIPLGIGIAL TMPTKGRMAS VCLIIMAIPL LIPWNVVGTI
WQIFGRADIG LLGATLAKLG VSYNYAGDPF DAWLTVLVMD VWHWTSLVAL LCYSGLRAIP
DVYYQAARID RASGWAVFRH IQLPKLKNVL LIAVMLRFMD SFMIYTEPFV LTGGGPGNAT
TFLSQTLTRM AVGQFDLGPA AAFSLVYFLI ILLVSWLFYT AMTHADKD
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