| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4102 |
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| Symbol | |
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| ID | 3936591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 4210070 |
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| End bp | 4210942 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637906488 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_512044 |
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| Protein GI | 89056593 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.414832 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.309443 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAGA CCGTCAACCA GAAGGCCTGG TTCCTGATCT TGCCGGTGCT GGTTCTTGTG
GGCTTCTCCG CCGTGGTGCC GCTAATGACG GTGGTGAATT ATTCAGTGCA GGACACCTTC
GGGAACAACG TCTTCTTTCC CGCGGGCCTT GAATGGTTCC AGATCAACCT GCAATCGGAC
CGCATGTGGG ACAGCCTGCA ACGGCAGCTG ATCTTCTCGG TCATCATTTT GTTGATCCAG
ATCCCGCTTG GCATCCTGAT CGCGCTGAAC ATGCCCAAAA GCGGGTTCTG GGCGTCGGTC
TGCCTTGTCC TGATGTCCCT GCCGCTGCTG ATCCCGTGGA ACGTGGTGGG CACGATCTGG
CAGATCTTTG GCCGCGCCGA CATTGGCCTT CTGGGCTACA CGCTGTCGGA AATAGGGATC
GATTACAATT ACACGCAGGA TTGGGTGGAT GCCTGGATCA CGCTGGTGGT GATGGACGTC
TGGCACTGGA CCTCACTGGT CGCTTTACTG GCCTATGCGG GTCTGCAATC CATCCCCGAC
GCCTATTATC AAGCGGCTAA GATCGATCAG GCGAGCCGTT GGAAAGTGTT CCGCTACATC
GAATTGCCGA AGATGCAGGG CGTCTTAATG ATCGCGATTC TGCTGCGGTT TATGGACAGT
TTCATGATCT ATACCGAGCC CTTCGTGGTC ACCGGGGGCG GGCCCGGCAG CTCCACCAAC
TTCCTGTCCA TCGACCTCGT GAACATGGCG TTGGGGCAGA TGGATCTGGG TCCCGCCGCG
TCTTATTCGA TCATGTATTA CCTTGTTATC CTACTGATTT CATACGTGTT CTATACGATC
ATGGTGAACC TCGACAAAAG GGATGGTGTG TAA
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| Protein sequence | MNKTVNQKAW FLILPVLVLV GFSAVVPLMT VVNYSVQDTF GNNVFFPAGL EWFQINLQSD
RMWDSLQRQL IFSVIILLIQ IPLGILIALN MPKSGFWASV CLVLMSLPLL IPWNVVGTIW
QIFGRADIGL LGYTLSEIGI DYNYTQDWVD AWITLVVMDV WHWTSLVALL AYAGLQSIPD
AYYQAAKIDQ ASRWKVFRYI ELPKMQGVLM IAILLRFMDS FMIYTEPFVV TGGGPGSSTN
FLSIDLVNMA LGQMDLGPAA SYSIMYYLVI LLISYVFYTI MVNLDKRDGV
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