| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3476 |
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| Symbol | |
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| ID | 5192427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3881790 |
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| End bp | 3882656 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640587928 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001268786 |
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| Protein GI | 148548684 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.747146 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0291568 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAACA AGGTGCCGAA CAACAAGGCC TGGTGGCTGG TGCTGCCGGT GTTCCTGCTG
GTCGCGTTCA GCGCGGTGGT GCCGATGATG ACGGTGGTCA ACTACTCGGT GCAAGACATC
TTCGACCAGT CCAGCCGCTA CTTCGTCGGT GCCGACTGGT ACCGCCAGGT ACTGCGCGAC
CCGGCGCTGC ACGACGCATT GCTGCGCCAG TTTATTTACT CGGCCTGTGT ACTGCTGATC
GAAATTCCGT TGGGTATAGG CATCGCCCTG GCCATGCCAA CCAAAGGCCG TATGGCCTCG
GTGTGCCTGA TCGTCATGGC TATCCCGTTG CTGATCCCGT GGAACGTGGT CGGCACTATC
TGGCAGATTT TTGGCCGGGC CGACATTGGC CTGCTCGGCG CTTCCCTGGC CAAGCTCGGG
GTCAGCTACA ACTATGCCGG TGACCCGTTC GACGCCTGGC TCACCGTGCT GGTGATGGAT
GTGTGGCACT GGACTTCGTT GGTGGCTCTG CTGTGCTATT CGGGGCTGCG TGCGATCCCC
GACGTGTACT ACCAGGCCGC GCGCATCGAT CGGGCCTCGG GCTGGGCGGT GTTTCGCCAT
ATCCAGCTGC CCAAGCTCAA GAACGTGCTG GTGATCGCGT TGATGCTGCG CTTCATGGAC
AGTTTCATGA TCTACACCGA GCCGTTCGTG CTGACCGGCG GCGGGCCAGG TAATGCGACC
ACGTTCCTCA GCCAGACCCT CACGCGTATG GCCGTAGGGC AGTTCGACCT GGGGCCGGCG
GCAGCGTTTT CACTGGTGTA CTTCCTGATC ATCCTGCTGG TGTCGTGGCT GTTCTACACA
GCCATGACCC ATGCCGACAA GGACTAG
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| Protein sequence | MNNKVPNNKA WWLVLPVFLL VAFSAVVPMM TVVNYSVQDI FDQSSRYFVG ADWYRQVLRD
PALHDALLRQ FIYSACVLLI EIPLGIGIAL AMPTKGRMAS VCLIVMAIPL LIPWNVVGTI
WQIFGRADIG LLGASLAKLG VSYNYAGDPF DAWLTVLVMD VWHWTSLVAL LCYSGLRAIP
DVYYQAARID RASGWAVFRH IQLPKLKNVL VIALMLRFMD SFMIYTEPFV LTGGGPGNAT
TFLSQTLTRM AVGQFDLGPA AAFSLVYFLI ILLVSWLFYT AMTHADKD
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