More than 300 homologs were found in PanDaTox collection
for query gene M446_1972 on replicon NC_010511
Organism: Methylobacterium sp. 4-46



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010511  M446_1972  binding-protein-dependent transport systems inner membrane component  100 
 
 
319 aa  634    Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_4892  binding-protein-dependent transport systems inner membrane component  79.04 
 
 
300 aa  482  1e-135  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.963081  n/a   
 
 
-
 
NC_007778  RPB_4214  binding-protein-dependent transport systems inner membrane component  78.97 
 
 
300 aa  478  1e-134  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.586864 
 
 
-
 
NC_007925  RPC_1364  binding-protein-dependent transport systems inner membrane component  77.52 
 
 
300 aa  479  1e-134  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.641446  normal 
 
 
-
 
NC_007958  RPD_4066  binding-protein-dependent transport systems inner membrane component  76.32 
 
 
300 aa  479  1e-134  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.556479  normal  0.615548 
 
 
-
 
NC_009485  BBta_2224  putative ABC transporter permease protein  77.15 
 
 
300 aa  475  1e-133  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.405929  normal  0.034026 
 
 
-
 
NC_012852  Rleg_5980  binding-protein-dependent transport systems inner membrane component  74.65 
 
 
288 aa  417  9.999999999999999e-116  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_0097  ABC transporter membrane spanning protein (sugar)  72.67 
 
 
295 aa  413  1e-114  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_007493  RSP_2666  ABC sugar (glycerol) transporter, inner membrane subunit  68.77 
 
 
290 aa  409  1e-113  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_3979  binding-protein-dependent transport systems inner membrane component  74.65 
 
 
288 aa  408  1e-113  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.774682  n/a   
 
 
-
 
NC_009049  Rsph17029_1324  binding-protein-dependent transport systems inner membrane component  68.77 
 
 
290 aa  409  1e-113  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_2906  binding-protein-dependent transport systems inner membrane component  71.63 
 
 
288 aa  407  1.0000000000000001e-112  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_011371  Rleg2_6467  binding-protein-dependent transport systems inner membrane component  74.65 
 
 
288 aa  404  1e-111  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_1594  binding-protein-dependent transport systems inner membrane component  73.63 
 
 
288 aa  399  9.999999999999999e-111  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_008687  Pden_4390  binding-protein-dependent transport systems inner membrane component  72.22 
 
 
295 aa  395  1e-109  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.117002 
 
 
-
 
NC_009428  Rsph17025_1205  binding-protein-dependent transport systems inner membrane component  68.77 
 
 
290 aa  396  1e-109  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.997435 
 
 
-
 
NC_010501  PputW619_1735  binding-protein-dependent transport systems inner membrane component  67.59 
 
 
287 aa  391  1e-108  Pseudomonas putida W619  Bacteria  normal  normal  0.336852 
 
 
-
 
NC_002947  PP_2262  binding-protein-dependent transport systems inner membrane component  67.13 
 
 
303 aa  389  1e-107  Pseudomonas putida KT2440  Bacteria  normal  decreased coverage  0.000854732 
 
 
-
 
NC_007802  Jann_4102  binding-protein-dependent transport systems inner membrane component  64.97 
 
 
290 aa  388  1e-107  Jannaschia sp. CCS1  Bacteria  normal  0.414832  normal  0.309443 
 
 
-
 
NC_008044  TM1040_2419  binding-protein-dependent transport systems inner membrane component  67.94 
 
 
287 aa  388  1e-107  Ruegeria sp. TM1040  Bacteria  normal  0.0339831  normal  0.708038 
 
 
-
 
NC_010322  PputGB1_1895  binding-protein-dependent transport systems inner membrane component  66.9 
 
 
288 aa  389  1e-107  Pseudomonas putida GB-1  Bacteria  normal  normal  0.248949 
 
 
-
 
NC_009512  Pput_3476  binding-protein-dependent transport systems inner membrane component  67.13 
 
 
288 aa  389  1e-107  Pseudomonas putida F1  Bacteria  normal  0.747146  normal  0.0291568 
 
 
-
 
NC_009952  Dshi_3130  sugar ABC transporter  67.6 
 
 
287 aa  387  1e-106  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.199935  normal 
 
 
-
 
NC_007492  Pfl01_3633  binding-protein dependent transport system inner membrane protein  65.05 
 
 
288 aa  378  1e-104  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.27163 
 
 
-
 
NC_009439  Pmen_2044  binding-protein-dependent transport systems inner membrane component  65.51 
 
 
287 aa  380  1e-104  Pseudomonas mendocina ymp  Bacteria  normal  0.071999  normal  0.651728 
 
 
-
 
NC_004578  PSPTO_3738  ABC transporter, permease protein  65.29 
 
 
288 aa  377  1e-103  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.482953  n/a   
 
 
-
 
NC_007005  Psyr_1739  binding-protein dependent transport system inner membrane protein  65.29 
 
 
288 aa  377  1e-103  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc3048  sugar-phosphate transmembrane ABC transporter protein  63.79 
 
 
296 aa  370  1e-101  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.071315 
 
 
-
 
NC_009654  Mmwyl1_0378  binding-protein-dependent transport systems inner membrane component  63.51 
 
 
289 aa  370  1e-101  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.374206 
 
 
-
 
NC_010682  Rpic_3330  binding-protein-dependent transport systems inner membrane component  63.12 
 
 
296 aa  367  1e-100  Ralstonia pickettii 12J  Bacteria  normal  normal  0.670382 
 
 
-
 
NC_012856  Rpic12D_2983  binding-protein-dependent transport systems inner membrane component  63.12 
 
 
296 aa  367  1e-100  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A2207  binding-protein dependent transport system inner membrane protein  67.56 
 
 
294 aa  361  9e-99  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_3394  binding-protein-dependent transport systems inner membrane component  65.52 
 
 
296 aa  356  2.9999999999999997e-97  Variovorax paradoxus S110  Bacteria  normal  0.391737  n/a   
 
 
-
 
NC_007973  Rmet_2232  binding-protein-dependent transport systems inner membrane component  66.22 
 
 
294 aa  355  5.999999999999999e-97  Cupriavidus metallidurans CH34  Bacteria  normal  0.0344398  normal  0.169998 
 
 
-
 
NC_010623  Bphy_5369  binding-protein-dependent transport systems inner membrane component  64.53 
 
 
297 aa  354  1e-96  Burkholderia phymatum STM815  Bacteria  normal  normal  0.469601 
 
 
-
 
NC_013440  Hoch_5938  binding-protein-dependent transport systems inner membrane component  62.42 
 
 
294 aa  353  2e-96  Haliangium ochraceum DSM 14365  Bacteria  normal  0.776913  normal 
 
 
-
 
NC_011992  Dtpsy_0378  binding-protein-dependent transport systems inner membrane component  64.88 
 
 
298 aa  353  2e-96  Acidovorax ebreus TPSY  Bacteria  normal  0.0188782  n/a   
 
 
-
 
NC_010676  Bphyt_6727  binding-protein-dependent transport systems inner membrane component  62.91 
 
 
298 aa  353  2.9999999999999997e-96  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_2320  binding-protein-dependent transport systems inner membrane component  62.88 
 
 
298 aa  351  1e-95  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.292517  normal  0.792602 
 
 
-
 
NC_008709  Ping_3172  ABC sugar (glycerol) transporter binding protein inner membrane protein  63.23 
 
 
286 aa  349  4e-95  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_1442  binding-protein-dependent transport systems inner membrane component  63.36 
 
 
289 aa  348  6e-95  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0523794  n/a   
 
 
-
 
NC_008752  Aave_0606  binding-protein-dependent transport systems inner membrane component  65.17 
 
 
298 aa  348  9e-95  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_0480  binding-protein-dependent transport systems inner membrane component  64.65 
 
 
296 aa  346  3e-94  Polaromonas sp. JS666  Bacteria  normal  0.0207202  normal 
 
 
-
 
NC_010002  Daci_1027  binding-protein-dependent transport systems inner membrane component  64.98 
 
 
297 aa  346  3e-94  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_2092  binding-protein-dependent transport systems inner membrane component  59.06 
 
 
292 aa  345  4e-94  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3674  binding-protein-dependent transport systems inner membrane component  60.94 
 
 
297 aa  333  2e-90  Rhodoferax ferrireducens T118  Bacteria  normal  0.0834675  n/a   
 
 
-
 
NC_008782  Ajs_0386  binding-protein-dependent transport systems inner membrane component  61.87 
 
 
298 aa  329  5.0000000000000004e-89  Acidovorax sp. JS42  Bacteria  normal  0.675577  normal 
 
 
-
 
NC_013223  Dret_2098  binding-protein-dependent transport systems inner membrane component  48.81 
 
 
289 aa  277  1e-73  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.0888929 
 
 
-
 
NC_007802  Jann_4106  binding-protein-dependent transport systems inner membrane component  45.21 
 
 
287 aa  217  2e-55  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2052  binding-protein-dependent transport systems inner membrane component  31.97 
 
 
291 aa  135  9.999999999999999e-31  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_0286  binding-protein-dependent transport systems inner membrane component  29.33 
 
 
291 aa  130  2.0000000000000002e-29  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.231338  normal 
 
 
-
 
NC_011369  Rleg2_0257  binding-protein-dependent transport systems inner membrane component  29.68 
 
 
291 aa  131  2.0000000000000002e-29  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.958787  normal 
 
 
-
 
NC_013205  Aaci_2236  binding-protein-dependent transport systems inner membrane component  30.85 
 
 
315 aa  126  4.0000000000000003e-28  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A1261  binding-protein dependent transport system inner membrane protein  30.9 
 
 
298 aa  124  2e-27  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.196832  n/a   
 
 
-
 
NC_013744  Htur_4398  binding-protein-dependent transport systems inner membrane component  29.45 
 
 
314 aa  124  2e-27  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.0144983  n/a   
 
 
-
 
NC_013595  Sros_3494  binding-protein-dependent transport systems inner membrane component  36.97 
 
 
311 aa  121  1.9999999999999998e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  0.716912  normal  0.704951 
 
 
-
 
NC_008686  Pden_1048  binding-protein-dependent transport systems inner membrane component  32.34 
 
 
308 aa  121  1.9999999999999998e-26  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2527  binding-protein-dependent transport systems inner membrane component  32.54 
 
 
309 aa  120  3.9999999999999996e-26  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.849073  n/a   
 
 
-
 
NC_012034  Athe_2309  binding-protein-dependent transport systems inner membrane component  28 
 
 
427 aa  120  3.9999999999999996e-26  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.00000129291  n/a   
 
 
-
 
NC_009636  Smed_2455  binding-protein-dependent transport systems inner membrane component  30.69 
 
 
313 aa  117  1.9999999999999998e-25  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2540  ABC transporter permease  35.94 
 
 
306 aa  118  1.9999999999999998e-25  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_013202  Hmuk_0943  binding-protein-dependent transport systems inner membrane component  28.03 
 
 
312 aa  117  1.9999999999999998e-25  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal  0.301949 
 
 
-
 
NC_014210  Ndas_3354  binding-protein-dependent transport systems inner membrane component  30.77 
 
 
299 aa  117  3e-25  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_6370  binding-protein-dependent transport systems inner membrane component  29.51 
 
 
318 aa  117  3e-25  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_2427  binding-protein-dependent transport systems inner membrane component  30.63 
 
 
322 aa  117  3e-25  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.535373  normal  0.626108 
 
 
-
 
NC_010320  Teth514_0396  binding-protein-dependent transport systems inner membrane component  30.77 
 
 
307 aa  117  3.9999999999999997e-25  Thermoanaerobacter sp. X514  Bacteria  normal  0.701562  n/a   
 
 
-
 
NC_013411  GYMC61_2958  binding-protein-dependent transport systems inner membrane component  31.22 
 
 
435 aa  116  6e-25  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012669  Bcav_0911  binding-protein-dependent transport systems inner membrane component  32.95 
 
 
315 aa  115  1.0000000000000001e-24  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.488788  normal 
 
 
-
 
NC_011729  PCC7424_1896  binding-protein-dependent transport systems inner membrane component  28.29 
 
 
296 aa  115  1.0000000000000001e-24  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  1.0543799999999999e-20 
 
 
-
 
NC_012791  Vapar_3349  binding-protein-dependent transport systems inner membrane component  31.56 
 
 
291 aa  115  1.0000000000000001e-24  Variovorax paradoxus S110  Bacteria  normal  0.230089  n/a   
 
 
-
 
NC_009338  Mflv_3776  binding-protein-dependent transport systems inner membrane component  32.89 
 
 
286 aa  115  1.0000000000000001e-24  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.771132  normal  0.363599 
 
 
-
 
NC_012848  Rleg_5199  binding-protein-dependent transport systems inner membrane component  26.48 
 
 
312 aa  114  2.0000000000000002e-24  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0867066 
 
 
-
 
NC_009636  Smed_2698  binding-protein-dependent transport systems inner membrane component  30.56 
 
 
295 aa  114  3e-24  Sinorhizobium medicae WSM419  Bacteria  normal  0.0832027  normal 
 
 
-
 
NC_010001  Cphy_3408  binding-protein-dependent transport systems inner membrane component  31.37 
 
 
293 aa  114  3e-24  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00259426  n/a   
 
 
-
 
NC_012669  Bcav_2817  binding-protein-dependent transport systems inner membrane component  32.34 
 
 
310 aa  114  3e-24  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.822068  normal 
 
 
-
 
NC_012669  Bcav_0647  binding-protein-dependent transport systems inner membrane component  29.75 
 
 
325 aa  113  4.0000000000000004e-24  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_4681  binding-protein-dependent transport systems inner membrane component  37.67 
 
 
289 aa  112  7.000000000000001e-24  Burkholderia ambifaria MC40-6  Bacteria  normal  0.205446  normal 
 
 
-
 
NC_013739  Cwoe_0172  binding-protein-dependent transport systems inner membrane component  31.12 
 
 
324 aa  112  1.0000000000000001e-23  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_5509  binding-protein-dependent transport systems inner membrane component  37.67 
 
 
289 aa  111  2.0000000000000002e-23  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.438366  normal 
 
 
-
 
NC_008061  Bcen_3593  binding-protein-dependent transport systems inner membrane component  37.67 
 
 
289 aa  111  2.0000000000000002e-23  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_4774  binding-protein-dependent transport systems inner membrane component  37.67 
 
 
289 aa  111  2.0000000000000002e-23  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.808754 
 
 
-
 
NC_010003  Pmob_0306  binding-protein-dependent transport systems inner membrane component  30.1 
 
 
294 aa  111  2.0000000000000002e-23  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_0548  ABC-type sugar / sn-glycerol-3-phosphate transport system permease protein ugpA  33.5 
 
 
288 aa  110  2.0000000000000002e-23  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_011368  Rleg2_5469  binding-protein-dependent transport systems inner membrane component  26.03 
 
 
313 aa  111  2.0000000000000002e-23  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.394829 
 
 
-
 
NC_007511  Bcep18194_B0940  ABC sugar transporter, inner membrane subunit  37.22 
 
 
289 aa  110  3e-23  Burkholderia sp. 383  Bacteria  normal  normal  0.298922 
 
 
-
 
NC_009523  RoseRS_1357  binding-protein-dependent transport systems inner membrane component  31.47 
 
 
316 aa  110  3e-23  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_0700  binding-protein-dependent transport systems inner membrane component  31.99 
 
 
336 aa  110  4.0000000000000004e-23  Polaromonas sp. JS666  Bacteria  normal  0.788363  normal 
 
 
-
 
NC_010676  Bphyt_5637  binding-protein-dependent transport systems inner membrane component  31.46 
 
 
318 aa  109  6e-23  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_3401  binding-protein-dependent transport systems inner membrane component  30.48 
 
 
305 aa  109  6e-23  Clostridium phytofermentans ISDg  Bacteria  normal  0.028536  n/a   
 
 
-
 
NC_008391  Bamb_4157  binding-protein-dependent transport systems inner membrane component  37.22 
 
 
289 aa  109  6e-23  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0571  binding-protein-dependent transport systems inner membrane component  28.52 
 
 
296 aa  109  8.000000000000001e-23  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_2623  binding-protein-dependent transport systems inner membrane component  35.68 
 
 
287 aa  108  9.000000000000001e-23  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_2091  binding-protein-dependent transport systems inner membrane component  30.87 
 
 
292 aa  108  1e-22  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2501  binding-protein-dependent transport systems inner membrane component  29.6 
 
 
312 aa  108  1e-22  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_1216  binding-protein-dependent transport systems inner membrane component  32.86 
 
 
315 aa  107  3e-22  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  decreased coverage  0.00000228392  n/a   
 
 
-
 
NC_008541  Arth_3328  binding-protein-dependent transport systems inner membrane component  28.42 
 
 
314 aa  107  3e-22  Arthrobacter sp. FB24  Bacteria  normal  0.0166533  n/a   
 
 
-
 
NC_012880  Dd703_3169  binding-protein-dependent transport systems inner membrane component  35.14 
 
 
290 aa  107  3e-22  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_013923  Nmag_3872  binding-protein-dependent transport systems inner membrane component  28.89 
 
 
315 aa  107  3e-22  Natrialba magadii ATCC 43099  Archaea  normal  0.0566045  n/a   
 
 
-
 
NC_013530  Xcel_2535  binding-protein-dependent transport systems inner membrane component  31.76 
 
 
314 aa  107  4e-22  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_4708  binding-protein-dependent transport systems inner membrane component  31.37 
 
 
293 aa  106  4e-22  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
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