Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4157 |
Symbol | |
ID | 4313052 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 1075669 |
End bp | 1076538 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638151998 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_776044 |
Protein GI | 115358906 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAGCCC TCGGCCGCAG CCTGCCGTTC GTCGCGCTGC TCGGCCCCGC GCTGCTGGTG CTGGCCGCGC TCGCGCTGTA CCCGGTCGCG CAGGTGCTGG TCGATTCGTT CTGCCGGGTC GACTACGCGG CCGGCCGGCG CACGTTCACC GGGCTCGCGA ACTATCGCGC GGTTCTCGGC GACGATGCGT TCACAGCCGG CTTCGGCAAC ACGCTGCGCT TCACGATCGT GGCGTCGCTC GCCGAAGTCA CGCTCGGCTT CGGCCTCGCG CTGCTGTTCG TGCGCGCGTT TCCGGGGCGG CGCATCGCGC TGCCGCTCGC GATCCTGCCG ATGATGCTGT CCACGCTCGT GTGCTCGGCG ATCTGGCGCA ACTGGCTCAA CTTCGACGGC TTCCTGAACG CGCTGCTCGC CGCGTTCGGC ATCGAAGGCG TGCGCTGGCT GTCCGATCCG CATCTTGCGT TGTGGTCGCT CGCGCTCGTC GACGTGTGGC AGTGGACGCC GATGGCGTTC CTGATCGTGC TGGCCGGGCT GCAATCGATC CCGCAGGAAC TGTACGAAGC CGCGCGCACC GACGGCGCGA GCGATTGGCA GTGCCTGCGC GACATCACGC TGCCGCTCGC GGCGCCGCAG ATCGGCCTCG CGCTGCTGCT GCGCTCGATC GAGACGTTCA AGCTGTTCGA CAAGGTCTAT GCGCTGACGG GCGGCGGCCC CGGCAACGCG ACGCAGACGC TGTCGACCTA CATTTACGAC ACGGGCTTTC GCTTCTTCAA CGTCGGGCCG GCGAGTGCCG CGTCGGTGCT GATGCTCGCG GCGTCCGCGC TGCTGGTTTC GGGGTACGTA TGGCAGACGG TTCGCAAGCG GCGCGCATGA
|
Protein sequence | MKALGRSLPF VALLGPALLV LAALALYPVA QVLVDSFCRV DYAAGRRTFT GLANYRAVLG DDAFTAGFGN TLRFTIVASL AEVTLGFGLA LLFVRAFPGR RIALPLAILP MMLSTLVCSA IWRNWLNFDG FLNALLAAFG IEGVRWLSDP HLALWSLALV DVWQWTPMAF LIVLAGLQSI PQELYEAART DGASDWQCLR DITLPLAAPQ IGLALLLRSI ETFKLFDKVY ALTGGGPGNA TQTLSTYIYD TGFRFFNVGP ASAASVLMLA ASALLVSGYV WQTVRKRRA
|
| |