More than 300 homologs were found in PanDaTox collection
for query gene Daci_0808 on replicon NC_010002
Organism: Delftia acidovorans SPH-1



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007298  Daro_0370  phenylacetic acid degradation protein paaN2  59.42 
 
 
554 aa  645    Dechloromonas aromatica RCB  Bacteria  hitchhiker  5.52975e-18  unclonable  0.0000000651019 
 
 
-
 
NC_011662  Tmz1t_1513  phenylacetic acid degradation protein paaN  60.29 
 
 
555 aa  686    Thauera sp. MZ1T  Bacteria  normal  0.166964  n/a   
 
 
-
 
NC_010002  Daci_0808  phenylacetic acid degradation protein paaN  100 
 
 
552 aa  1116    Delftia acidovorans SPH-1  Bacteria  normal  0.464517  normal 
 
 
-
 
NC_007348  Reut_B3740  phenylacetic acid degradation protein paaN2  52.73 
 
 
554 aa  586  1e-166  Ralstonia eutropha JMP134  Bacteria  normal  0.0891249  n/a   
 
 
-
 
NC_013739  Cwoe_2197  phenylacetic acid degradation protein paaN  56.34 
 
 
566 aa  563  1.0000000000000001e-159  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_4493  phenylacetic acid degradation protein paaN  53.62 
 
 
557 aa  560  1e-158  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_0515  phenylacetic acid degradation protein paaN  52.91 
 
 
568 aa  557  1e-157  Burkholderia cenocepacia MC0-3  Bacteria  hitchhiker  0.0000855749  normal  0.271248 
 
 
-
 
NC_009380  Strop_0265  phenylacetic acid degradation protein paaN  53.55 
 
 
561 aa  556  1e-157  Salinispora tropica CNB-440  Bacteria  normal  hitchhiker  0.000588843 
 
 
-
 
NC_010551  BamMC406_0473  phenylacetic acid degradation protein paaN  52.91 
 
 
568 aa  553  1e-156  Burkholderia ambifaria MC40-6  Bacteria  hitchhiker  0.0000197597  normal  0.595687 
 
 
-
 
NC_007510  Bcep18194_A3630  phenylacetic acid degradation protein paaN2  53.09 
 
 
568 aa  555  1e-156  Burkholderia sp. 383  Bacteria  hitchhiker  0.000000209323  normal  0.623158 
 
 
-
 
NC_007651  BTH_I2900  phenylacetic acid degradation protein paaN  52.55 
 
 
568 aa  555  1e-156  Burkholderia thailandensis E264  Bacteria  hitchhiker  0.0000137012  n/a   
 
 
-
 
NC_008060  Bcen_2562  phenylacetic acid degradation protein paaN2  53.09 
 
 
568 aa  554  1e-156  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.945881  n/a   
 
 
-
 
NC_008542  Bcen2424_0543  phenylacetic acid degradation protein paaN  53.09 
 
 
568 aa  554  1e-156  Burkholderia cenocepacia HI2424  Bacteria  hitchhiker  0.0023429  n/a   
 
 
-
 
NC_008784  BMASAVP1_0634  aldehyde dehydrogenase family protein  52.91 
 
 
568 aa  550  1e-155  Burkholderia mallei SAVP1  Bacteria  hitchhiker  0.000013485  n/a   
 
 
-
 
NC_010084  Bmul_2851  phenylacetic acid degradation protein paaN  53.09 
 
 
568 aa  549  1e-155  Burkholderia multivorans ATCC 17616  Bacteria  hitchhiker  0.000000806578  normal  0.567256 
 
 
-
 
NC_006349  BMAA0543  aldehyde dehydrogenase family protein  52.91 
 
 
568 aa  550  1e-155  Burkholderia mallei ATCC 23344  Bacteria  hitchhiker  0.000511741  n/a   
 
 
-
 
NC_009079  BMA10247_A1901  aldehyde dehydrogenase family protein  52.91 
 
 
568 aa  550  1e-155  Burkholderia mallei NCTC 10247  Bacteria  normal  0.0596942  n/a   
 
 
-
 
NC_009074  BURPS668_3546  phenylacetic acid degradation protein paaN  52.73 
 
 
568 aa  549  1e-155  Burkholderia pseudomallei 668  Bacteria  hitchhiker  0.0000144132  n/a   
 
 
-
 
NC_013947  Snas_6112  phenylacetic acid degradation protein paaN  51.27 
 
 
575 aa  550  1e-155  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.771737 
 
 
-
 
NC_007434  BURPS1710b_3564  phenylacetic acid degradation protein paaN  52.36 
 
 
568 aa  545  1e-154  Burkholderia pseudomallei 1710b  Bacteria  hitchhiker  0.00000332176  n/a   
 
 
-
 
NC_009076  BURPS1106A_3573  phenylacetic acid degradation protein paaN  52.55 
 
 
568 aa  547  1e-154  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_0931  aldehyde dehydrogenase family protein  52.73 
 
 
568 aa  548  1e-154  Burkholderia mallei NCTC 10229  Bacteria  hitchhiker  0.00000213032  n/a   
 
 
-
 
NC_008390  Bamb_0448  phenylacetic acid degradation protein paaN  52.73 
 
 
568 aa  548  1e-154  Burkholderia ambifaria AMMD  Bacteria  normal  0.024942  n/a   
 
 
-
 
NC_010622  Bphy_2689  phenylacetic acid degradation protein paaN  52.63 
 
 
563 aa  546  1e-154  Burkholderia phymatum STM815  Bacteria  hitchhiker  0.0000855846  normal 
 
 
-
 
NC_009953  Sare_0307  phenylacetic acid degradation protein paaN  53.37 
 
 
557 aa  543  1e-153  Salinispora arenicola CNS-205  Bacteria  normal  0.777048  hitchhiker  0.000751962 
 
 
-
 
NC_013131  Caci_6185  phenylacetic acid degradation protein paaN  52.39 
 
 
555 aa  545  1e-153  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_3486  phenylacetic acid degradation protein paaN  52.27 
 
 
566 aa  523  1e-147  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.0000217108  hitchhiker  0.00037416 
 
 
-
 
NC_007951  Bxe_A0470  phenylacetic acid ring-opening protein (PaaZ')  52.09 
 
 
566 aa  524  1e-147  Burkholderia xenovorans LB400  Bacteria  normal  0.0566882  normal 
 
 
-
 
NC_008688  Pden_4798  phenylacetic acid degradation protein paaN  54.53 
 
 
559 aa  513  1e-144  Paracoccus denitrificans PD1222  Bacteria  normal  0.484445  normal  0.252551 
 
 
-
 
NC_008578  Acel_1435  phenylacetic acid degradation protein paaN  51 
 
 
556 aa  509  1e-143  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_3362  phenylacetic acid degradation protein paaN  51.4 
 
 
553 aa  477  1e-133  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.586736  n/a   
 
 
-
 
NC_009720  Xaut_0904  phenylacetic acid degradation protein paaN  50.36 
 
 
553 aa  451  1e-125  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_013169  Ksed_01930  phenylacetic acid degradation protein paaN  45.62 
 
 
582 aa  431  1e-119  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_1136  phenylacetic acid degradation protein paaN  41.68 
 
 
552 aa  415  1e-114  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.368939 
 
 
-
 
NC_010172  Mext_0319  bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  25.98 
 
 
1035 aa  81.3  0.00000000000004  Methylobacterium extorquens PA1  Bacteria  normal  0.0134136  normal 
 
 
-
 
NC_010681  Bphyt_1561  succinylglutamic semialdehyde dehydrogenase  28.22 
 
 
487 aa  81.3  0.00000000000005  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_5114  betaine aldehyde dehydrogenase  23.1 
 
 
490 aa  79.3  0.0000000000002  Pseudomonas putida GB-1  Bacteria  normal  0.502365  normal 
 
 
-
 
NC_011757  Mchl_0364  bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  25.72 
 
 
1035 aa  79  0.0000000000002  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.929522  normal 
 
 
-
 
NC_013205  Aaci_1057  Aldehyde Dehydrogenase  22.25 
 
 
491 aa  78.2  0.0000000000004  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_5063  betaine aldehyde dehydrogenase  22.86 
 
 
490 aa  77.4  0.0000000000007  Pseudomonas putida KT2440  Bacteria  normal  0.921344  normal 
 
 
-
 
NC_009512  Pput_4936  betaine aldehyde dehydrogenase  22.86 
 
 
490 aa  77.4  0.0000000000007  Pseudomonas putida F1  Bacteria  normal  0.208261  normal 
 
 
-
 
NC_008148  Rxyl_0544  aldehyde dehydrogenase  27.25 
 
 
482 aa  77  0.0000000000007  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.292442  n/a   
 
 
-
 
NC_010501  PputW619_0402  betaine aldehyde dehydrogenase  22.8 
 
 
490 aa  77.4  0.0000000000007  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_0395  bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  23.83 
 
 
1030 aa  77  0.0000000000009  Methylobacterium populi BJ001  Bacteria  normal  0.250397  normal  0.629543 
 
 
-
 
NC_007484  Noc_1705  bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  23.99 
 
 
1044 aa  76.3  0.000000000001  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_5622  putative aldehyde dehydrogenase  24.48 
 
 
489 aa  74.7  0.000000000004  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_2555  betaine aldehyde dehydrogenase  25.71 
 
 
490 aa  72.8  0.00000000001  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0789453  n/a   
 
 
-
 
NC_009832  Spro_1514  betaine aldehyde dehydrogenase  23.8 
 
 
490 aa  73.2  0.00000000001  Serratia proteamaculans 568  Bacteria  normal  0.0736273  normal 
 
 
-
 
NC_007336  Reut_C5935  aldehyde dehydrogenase  25.59 
 
 
476 aa  72.8  0.00000000002  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A1842  betaine-aldehyde dehydrogenase  24.84 
 
 
476 aa  72.4  0.00000000002  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_014230  CA2559_07430  hypothetical protein  23.8 
 
 
481 aa  72.4  0.00000000002  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.782737  n/a   
 
 
-
 
NC_014211  Ndas_5405  Aldehyde Dehydrogenase  26.34 
 
 
529 aa  72.4  0.00000000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.264091  normal 
 
 
-
 
NC_009708  YpsIP31758_2830  betaine aldehyde dehydrogenase  23.86 
 
 
490 aa  72  0.00000000002  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.143897  n/a   
 
 
-
 
NC_010581  Bind_2812  bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  24.52 
 
 
1032 aa  71.6  0.00000000004  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.616063  normal 
 
 
-
 
NC_013501  Rmar_1303  Aldehyde Dehydrogenase  26.89 
 
 
516 aa  71.2  0.00000000004  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_2218  bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  23.01 
 
 
1268 aa  71.2  0.00000000004  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.270938  n/a   
 
 
-
 
NC_008312  Tery_3446  L-proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase  22.57 
 
 
993 aa  71.2  0.00000000005  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_2352  aldehyde dehydrogenase  25.25 
 
 
474 aa  70.9  0.00000000006  Pelobacter propionicus DSM 2379  Bacteria  normal  0.448726  n/a   
 
 
-
 
NC_010465  YPK_2916  betaine aldehyde dehydrogenase  24.28 
 
 
490 aa  70.9  0.00000000006  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_1710  aldehyde dehydrogenase  26.52 
 
 
513 aa  70.1  0.00000000009  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1496  NAD-dependent aldehyde dehydrogenases  23.83 
 
 
496 aa  69.7  0.0000000001  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.000254816  n/a   
 
 
-
 
NC_013947  Snas_4113  Aldehyde Dehydrogenase  24.74 
 
 
504 aa  69.7  0.0000000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.676341 
 
 
-
 
NC_010622  Bphy_1284  aldehyde dehydrogenase  24.72 
 
 
478 aa  68.9  0.0000000002  Burkholderia phymatum STM815  Bacteria  normal  normal  0.811614 
 
 
-
 
NC_005957  BT9727_0279  1-pyrroline-5-carboxylate dehydrogenase  22.58 
 
 
515 aa  69.3  0.0000000002  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0282  1-pyrroline-5-carboxylate dehydrogenase  22.58 
 
 
515 aa  69.3  0.0000000002  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0340  1-pyrroline-5-carboxylate dehydrogenase  22.58 
 
 
515 aa  69.3  0.0000000002  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011658  BCAH187_A0381  1-pyrroline-5-carboxylate dehydrogenase  22.58 
 
 
515 aa  69.3  0.0000000002  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_2311  bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  25 
 
 
1221 aa  68.9  0.0000000002  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_007530  GBAA_0309  1-pyrroline-5-carboxylate dehydrogenase  22.58 
 
 
515 aa  69.3  0.0000000002  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_6158  betaine aldehyde dehydrogenase  25.38 
 
 
490 aa  68.9  0.0000000002  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0560  Aldehyde Dehydrogenase  24.34 
 
 
500 aa  69.3  0.0000000002  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_007948  Bpro_2450  betaine-aldehyde dehydrogenase  25.54 
 
 
496 aa  69.3  0.0000000002  Polaromonas sp. JS666  Bacteria  normal  normal  0.389244 
 
 
-
 
NC_010623  Bphy_3309  betaine aldehyde dehydrogenase  26.14 
 
 
489 aa  68.9  0.0000000002  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_1894  betaine-aldehyde dehydrogenase  24.17 
 
 
497 aa  68.9  0.0000000002  Arthrobacter sp. FB24  Bacteria  normal  0.0153798  n/a   
 
 
-
 
NC_011772  BCG9842_B4965  1-pyrroline-5-carboxylate dehydrogenase  22.35 
 
 
515 aa  68.6  0.0000000003  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_0338  1-pyrroline-5-carboxylate dehydrogenase  22.58 
 
 
515 aa  68.6  0.0000000003  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_3017  aldehyde dehydrogenase  27.84 
 
 
478 aa  68.2  0.0000000003  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_0383  Aldehyde Dehydrogenase  23.59 
 
 
493 aa  68.6  0.0000000003  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A2920  succinylglutamic semialdehyde dehydrogenase  26.89 
 
 
489 aa  68.6  0.0000000003  Burkholderia xenovorans LB400  Bacteria  normal  0.215201  normal  0.372996 
 
 
-
 
NC_011725  BCB4264_A0355  1-pyrroline-5-carboxylate dehydrogenase  22.35 
 
 
515 aa  68.6  0.0000000003  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_1325  bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  25.44 
 
 
1204 aa  68.6  0.0000000003  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_4199  aldehyde dehydrogenase  29.63 
 
 
522 aa  68.6  0.0000000003  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0833  aldehyde dehydrogenase  26.13 
 
 
996 aa  68.6  0.0000000003  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.286586  normal  0.902377 
 
 
-
 
NC_005945  BAS0295  1-pyrroline-5-carboxylate dehydrogenase  22.58 
 
 
515 aa  68.2  0.0000000004  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_1670  Aldehyde Dehydrogenase  26.79 
 
 
1090 aa  68.2  0.0000000004  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_0482  betaine aldehyde dehydrogenase  24.31 
 
 
490 aa  68.2  0.0000000004  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008347  Mmar10_0398  bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  23.63 
 
 
1041 aa  68.2  0.0000000004  Maricaulis maris MCS10  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_64740  putative aldehyde dehydrogenase  24.24 
 
 
489 aa  68.2  0.0000000004  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.257516  normal 
 
 
-
 
NC_008463  PA14_70950  betaine aldehyde dehydrogenase  25.13 
 
 
490 aa  68.2  0.0000000004  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.934353 
 
 
-
 
NC_013411  GYMC61_1253  Aldehyde Dehydrogenase  22.25 
 
 
493 aa  67.8  0.0000000005  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007333  Tfu_1776  betaine-aldehyde dehydrogenase  25.63 
 
 
472 aa  67.8  0.0000000005  Thermobifida fusca YX  Bacteria  normal  0.146977  n/a   
 
 
-
 
NC_013205  Aaci_0868  Aldehyde Dehydrogenase  26.71 
 
 
484 aa  67.8  0.0000000005  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I1778  succinylglutamic semialdehyde dehydrogenase  27.15 
 
 
487 aa  67.8  0.0000000005  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_2213  Aldehyde Dehydrogenase  25.13 
 
 
499 aa  67.4  0.0000000006  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.00273985 
 
 
-
 
NC_008699  Noca_1421  aldehyde dehydrogenase  26.34 
 
 
490 aa  67.4  0.0000000006  Nocardioides sp. JS614  Bacteria  normal  0.545693  n/a   
 
 
-
 
NC_013739  Cwoe_4339  Aldehyde Dehydrogenase  26.4 
 
 
482 aa  67.4  0.0000000006  Conexibacter woesei DSM 14684  Bacteria  normal  0.222249  normal 
 
 
-
 
NC_013441  Gbro_3847  Aldehyde dehydrogenase (NAD(+))  25.75 
 
 
488 aa  67.4  0.0000000006  Gordonia bronchialis DSM 43247  Bacteria  normal  0.794962  n/a   
 
 
-
 
NC_003910  CPS_0387  aldehyde dehydrogenase family protein  20.88 
 
 
473 aa  67  0.0000000007  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_1086  aldehyde dehydrogenase  29.85 
 
 
490 aa  67.4  0.0000000007  Thermobispora bispora DSM 43833  Bacteria  normal  0.0121968  decreased coverage  0.00153229 
 
 
-
 
NC_007347  Reut_A1478  aldehyde dehydrogenase  27.34 
 
 
481 aa  67.4  0.0000000007  Ralstonia eutropha JMP134  Bacteria  normal  0.696903  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>