More than 300 homologs were found in PanDaTox collection
for query gene Reut_B3740 on replicon NC_007348
Organism: Ralstonia eutropha JMP134



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009079  BMA10247_A1901  aldehyde dehydrogenase family protein  70.27 
 
 
568 aa  776    Burkholderia mallei NCTC 10247  Bacteria  normal  0.0596942  n/a   
 
 
-
 
NC_010681  Bphyt_3486  phenylacetic acid degradation protein paaN  68.88 
 
 
566 aa  744    Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.0000217108  hitchhiker  0.00037416 
 
 
-
 
NC_006349  BMAA0543  aldehyde dehydrogenase family protein  70.27 
 
 
568 aa  776    Burkholderia mallei ATCC 23344  Bacteria  hitchhiker  0.000511741  n/a   
 
 
-
 
NC_008699  Noca_4493  phenylacetic acid degradation protein paaN  60.44 
 
 
557 aa  667    Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B3740  phenylacetic acid degradation protein paaN2  100 
 
 
554 aa  1138    Ralstonia eutropha JMP134  Bacteria  normal  0.0891249  n/a   
 
 
-
 
NC_009074  BURPS668_3546  phenylacetic acid degradation protein paaN  70.09 
 
 
568 aa  775    Burkholderia pseudomallei 668  Bacteria  hitchhiker  0.0000144132  n/a   
 
 
-
 
NC_007434  BURPS1710b_3564  phenylacetic acid degradation protein paaN  69.91 
 
 
568 aa  775    Burkholderia pseudomallei 1710b  Bacteria  hitchhiker  0.00000332176  n/a   
 
 
-
 
NC_007510  Bcep18194_A3630  phenylacetic acid degradation protein paaN2  70.27 
 
 
568 aa  786    Burkholderia sp. 383  Bacteria  hitchhiker  0.000000209323  normal  0.623158 
 
 
-
 
NC_008835  BMA10229_0931  aldehyde dehydrogenase family protein  70.09 
 
 
568 aa  774    Burkholderia mallei NCTC 10229  Bacteria  hitchhiker  0.00000213032  n/a   
 
 
-
 
NC_009380  Strop_0265  phenylacetic acid degradation protein paaN  60.14 
 
 
561 aa  654    Salinispora tropica CNB-440  Bacteria  normal  hitchhiker  0.000588843 
 
 
-
 
NC_007651  BTH_I2900  phenylacetic acid degradation protein paaN  70.99 
 
 
568 aa  794    Burkholderia thailandensis E264  Bacteria  hitchhiker  0.0000137012  n/a   
 
 
-
 
NC_011662  Tmz1t_1513  phenylacetic acid degradation protein paaN  57.45 
 
 
555 aa  637    Thauera sp. MZ1T  Bacteria  normal  0.166964  n/a   
 
 
-
 
NC_009953  Sare_0307  phenylacetic acid degradation protein paaN  60.69 
 
 
557 aa  645    Salinispora arenicola CNS-205  Bacteria  normal  0.777048  hitchhiker  0.000751962 
 
 
-
 
NC_007951  Bxe_A0470  phenylacetic acid ring-opening protein (PaaZ')  68.53 
 
 
566 aa  740    Burkholderia xenovorans LB400  Bacteria  normal  0.0566882  normal 
 
 
-
 
NC_008784  BMASAVP1_0634  aldehyde dehydrogenase family protein  70.27 
 
 
568 aa  776    Burkholderia mallei SAVP1  Bacteria  hitchhiker  0.000013485  n/a   
 
 
-
 
NC_013131  Caci_6185  phenylacetic acid degradation protein paaN  58.91 
 
 
555 aa  645    Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_2197  phenylacetic acid degradation protein paaN  59.64 
 
 
566 aa  638    Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_2689  phenylacetic acid degradation protein paaN  68.71 
 
 
563 aa  764    Burkholderia phymatum STM815  Bacteria  hitchhiker  0.0000855846  normal 
 
 
-
 
NC_009076  BURPS1106A_3573  phenylacetic acid degradation protein paaN  70.09 
 
 
568 aa  776    Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_2851  phenylacetic acid degradation protein paaN  70.27 
 
 
568 aa  775    Burkholderia multivorans ATCC 17616  Bacteria  hitchhiker  0.000000806578  normal  0.567256 
 
 
-
 
NC_008060  Bcen_2562  phenylacetic acid degradation protein paaN2  70.99 
 
 
568 aa  782    Burkholderia cenocepacia AU 1054  Bacteria  normal  0.945881  n/a   
 
 
-
 
NC_010508  Bcenmc03_0515  phenylacetic acid degradation protein paaN  70.63 
 
 
568 aa  781    Burkholderia cenocepacia MC0-3  Bacteria  hitchhiker  0.0000855749  normal  0.271248 
 
 
-
 
NC_010551  BamMC406_0473  phenylacetic acid degradation protein paaN  70.45 
 
 
568 aa  775    Burkholderia ambifaria MC40-6  Bacteria  hitchhiker  0.0000197597  normal  0.595687 
 
 
-
 
NC_013947  Snas_6112  phenylacetic acid degradation protein paaN  58.48 
 
 
575 aa  658    Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.771737 
 
 
-
 
NC_008390  Bamb_0448  phenylacetic acid degradation protein paaN  70.63 
 
 
568 aa  775    Burkholderia ambifaria AMMD  Bacteria  normal  0.024942  n/a   
 
 
-
 
NC_008542  Bcen2424_0543  phenylacetic acid degradation protein paaN  70.99 
 
 
568 aa  782    Burkholderia cenocepacia HI2424  Bacteria  hitchhiker  0.0023429  n/a   
 
 
-
 
NC_010002  Daci_0808  phenylacetic acid degradation protein paaN  52.73 
 
 
552 aa  577  1.0000000000000001e-163  Delftia acidovorans SPH-1  Bacteria  normal  0.464517  normal 
 
 
-
 
NC_007298  Daro_0370  phenylacetic acid degradation protein paaN2  55.83 
 
 
554 aa  574  1.0000000000000001e-162  Dechloromonas aromatica RCB  Bacteria  hitchhiker  5.52975e-18  unclonable  0.0000000651019 
 
 
-
 
NC_008688  Pden_4798  phenylacetic acid degradation protein paaN  54.18 
 
 
559 aa  556  1e-157  Paracoccus denitrificans PD1222  Bacteria  normal  0.484445  normal  0.252551 
 
 
-
 
NC_011894  Mnod_3362  phenylacetic acid degradation protein paaN  54.02 
 
 
553 aa  538  9.999999999999999e-153  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.586736  n/a   
 
 
-
 
NC_009720  Xaut_0904  phenylacetic acid degradation protein paaN  54.89 
 
 
553 aa  536  1e-151  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_013169  Ksed_01930  phenylacetic acid degradation protein paaN  53.05 
 
 
582 aa  531  1e-149  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_1435  phenylacetic acid degradation protein paaN  48.46 
 
 
556 aa  508  9.999999999999999e-143  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_1136  phenylacetic acid degradation protein paaN  45.19 
 
 
552 aa  495  1e-139  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.368939 
 
 
-
 
NC_008148  Rxyl_0544  aldehyde dehydrogenase  27.37 
 
 
482 aa  95.1  3e-18  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.292442  n/a   
 
 
-
 
NC_009656  PSPA7_5622  putative aldehyde dehydrogenase  27.23 
 
 
489 aa  91.7  3e-17  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_3446  L-proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase  24.24 
 
 
993 aa  90.9  6e-17  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_64740  putative aldehyde dehydrogenase  27.64 
 
 
489 aa  86.3  0.000000000000001  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.257516  normal 
 
 
-
 
NC_007413  Ava_2942  L-proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase  23.62 
 
 
993 aa  84  0.000000000000006  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3125  aldehyde dehydrogenase  28.4 
 
 
502 aa  84  0.000000000000006  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_1496  NAD-dependent aldehyde dehydrogenases  28.14 
 
 
496 aa  82.4  0.00000000000002  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.000254816  n/a   
 
 
-
 
NC_011729  PCC7424_1002  delta-1-pyrroline-5-carboxylate dehydrogenase  23.98 
 
 
991 aa  82.8  0.00000000000002  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0261182 
 
 
-
 
NC_010501  PputW619_2012  2-hydroxymuconic semialdehyde dehydrogenase  26.34 
 
 
490 aa  81.3  0.00000000000004  Pseudomonas putida W619  Bacteria  normal  0.19915  normal  0.981188 
 
 
-
 
NC_011071  Smal_1728  Aldehyde Dehydrogenase  26.81 
 
 
510 aa  81.6  0.00000000000004  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.193131  normal  0.860615 
 
 
-
 
NC_011071  Smal_3490  Aldehyde Dehydrogenase  28.06 
 
 
488 aa  81.3  0.00000000000004  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.836011  normal  0.347598 
 
 
-
 
NC_013411  GYMC61_1043  1-pyrroline-5-carboxylate dehydrogenase  24.38 
 
 
515 aa  80.9  0.00000000000005  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012793  GWCH70_0274  1-pyrroline-5-carboxylate dehydrogenase  25.56 
 
 
515 aa  80.9  0.00000000000006  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00811  piperideine-6-carboxylate dehydrogenase  27.11 
 
 
526 aa  80.5  0.00000000000008  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_0442  Aldehyde Dehydrogenase  25.31 
 
 
486 aa  79.7  0.0000000000001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_1311  benzaldehyde dehydrogenase (NAD+)  27.54 
 
 
489 aa  79.7  0.0000000000001  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008392  Bamb_5579  benzaldehyde dehydrogenase (NAD(+))  28.44 
 
 
492 aa  79.7  0.0000000000001  Burkholderia ambifaria AMMD  Bacteria  normal  0.623419  normal 
 
 
-
 
NC_008544  Bcen2424_6518  benzaldehyde dehydrogenase (NAD(+))  27.54 
 
 
489 aa  79.7  0.0000000000001  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_007512  Plut_0300  aldehyde dehydrogenase  25.23 
 
 
458 aa  79  0.0000000000002  Chlorobium luteolum DSM 273  Bacteria  normal  0.0223565  hitchhiker  0.0000134902 
 
 
-
 
NC_009654  Mmwyl1_3135  aldehyde dehydrogenase  24.47 
 
 
463 aa  78.6  0.0000000000003  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_2927  Aldehyde Dehydrogenase  25 
 
 
491 aa  78.6  0.0000000000003  Conexibacter woesei DSM 14684  Bacteria  hitchhiker  0.00501178  normal  0.281874 
 
 
-
 
NC_008541  Arth_1894  betaine-aldehyde dehydrogenase  26.29 
 
 
497 aa  78.2  0.0000000000003  Arthrobacter sp. FB24  Bacteria  normal  0.0153798  n/a   
 
 
-
 
NC_007948  Bpro_2450  betaine-aldehyde dehydrogenase  26.07 
 
 
496 aa  78.2  0.0000000000004  Polaromonas sp. JS666  Bacteria  normal  normal  0.389244 
 
 
-
 
NC_008554  Sfum_0833  aldehyde dehydrogenase  26.9 
 
 
996 aa  78.2  0.0000000000004  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.286586  normal  0.902377 
 
 
-
 
NC_014165  Tbis_1086  aldehyde dehydrogenase  28.61 
 
 
490 aa  77.4  0.0000000000006  Thermobispora bispora DSM 43833  Bacteria  normal  0.0121968  decreased coverage  0.00153229 
 
 
-
 
NC_009674  Bcer98_0289  1-pyrroline-5-carboxylate dehydrogenase  24.66 
 
 
515 aa  77  0.0000000000009  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_2635  Aldehyde Dehydrogenase  29.37 
 
 
474 aa  76.3  0.000000000001  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.311715 
 
 
-
 
NC_010512  Bcenmc03_6120  aldehyde dehydrogenase  26.95 
 
 
489 aa  76.6  0.000000000001  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_3586  betaine-aldehyde dehydrogenase  29.39 
 
 
500 aa  76.6  0.000000000001  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_5502  betaine-aldehyde dehydrogenase  29.39 
 
 
500 aa  76.6  0.000000000001  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008543  Bcen2424_4781  betaine-aldehyde dehydrogenase  29.39 
 
 
500 aa  76.6  0.000000000001  Burkholderia cenocepacia HI2424  Bacteria  normal  0.494412  normal 
 
 
-
 
NC_007650  BTH_II1537  phenylacetaldehyde dehydrogenase  29.75 
 
 
573 aa  75.9  0.000000000002  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_4164  betaine-aldehyde dehydrogenase  29.03 
 
 
500 aa  75.9  0.000000000002  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_010557  BamMC406_6305  aldehyde dehydrogenase  27.84 
 
 
492 aa  75.9  0.000000000002  Burkholderia ambifaria MC40-6  Bacteria  normal  0.482135  normal  0.128394 
 
 
-
 
NC_010552  BamMC406_4688  betaine-aldehyde dehydrogenase  28.67 
 
 
500 aa  75.1  0.000000000003  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_009718  Fnod_1641  putative delta-1-pyrroline-5-carboxylate dehydrogenase  25.52 
 
 
525 aa  75.1  0.000000000003  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_1959  delta-1-pyrroline-5-carboxylate dehydrogenase  24.05 
 
 
1001 aa  74.7  0.000000000004  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.028462 
 
 
-
 
NC_011772  BCG9842_B4965  1-pyrroline-5-carboxylate dehydrogenase  23.7 
 
 
515 aa  74.3  0.000000000005  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A0355  1-pyrroline-5-carboxylate dehydrogenase  23.7 
 
 
515 aa  74.3  0.000000000005  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_1325  bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  27.43 
 
 
1204 aa  74.3  0.000000000005  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0290  1-pyrroline-5-carboxylate dehydrogenase  23.67 
 
 
515 aa  73.9  0.000000000006  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009051  Memar_1201  betaine-aldehyde dehydrogenase  26 
 
 
476 aa  73.9  0.000000000006  Methanoculleus marisnigri JR1  Archaea  normal  0.18248  n/a   
 
 
-
 
NC_007484  Noc_1710  aldehyde dehydrogenase  26.71 
 
 
513 aa  73.9  0.000000000007  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B0933  betaine-aldehyde dehydrogenase  29.03 
 
 
500 aa  73.9  0.000000000007  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_5059  betaine aldehyde dehydrogenase  28.4 
 
 
489 aa  73.9  0.000000000007  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.0560116 
 
 
-
 
NC_011831  Cagg_3333  delta-1-pyrroline-5-carboxylate dehydrogenase  25.22 
 
 
521 aa  73.9  0.000000000007  Chloroflexus aggregans DSM 9485  Bacteria  normal  unclonable  0.000000027969 
 
 
-
 
NC_005957  BT9727_0279  1-pyrroline-5-carboxylate dehydrogenase  23.7 
 
 
515 aa  73.9  0.000000000008  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0282  1-pyrroline-5-carboxylate dehydrogenase  23.7 
 
 
515 aa  73.9  0.000000000008  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_009426  Saro_3876  aldehyde dehydrogenase  28.25 
 
 
479 aa  73.9  0.000000000008  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.104084  n/a   
 
 
-
 
NC_011658  BCAH187_A0381  1-pyrroline-5-carboxylate dehydrogenase  23.7 
 
 
515 aa  73.9  0.000000000008  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0340  1-pyrroline-5-carboxylate dehydrogenase  23.7 
 
 
515 aa  73.9  0.000000000008  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_007530  GBAA_0309  1-pyrroline-5-carboxylate dehydrogenase  23.7 
 
 
515 aa  73.9  0.000000000008  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_23320  succinate semialdehyde dehydrogenase  24.83 
 
 
490 aa  73.6  0.00000000001  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.0258087 
 
 
-
 
NC_009832  Spro_2931  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  25.82 
 
 
1323 aa  73.6  0.00000000001  Serratia proteamaculans 568  Bacteria  normal  0.637197  normal 
 
 
-
 
NC_003909  BCE_0338  1-pyrroline-5-carboxylate dehydrogenase  23.7 
 
 
515 aa  73.2  0.00000000001  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_0319  bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  24.44 
 
 
1035 aa  73.2  0.00000000001  Methylobacterium extorquens PA1  Bacteria  normal  0.0134136  normal 
 
 
-
 
NC_012856  Rpic12D_1403  Aldehyde Dehydrogenase  26.8 
 
 
478 aa  73.6  0.00000000001  Ralstonia pickettii 12D  Bacteria  normal  normal  0.0321305 
 
 
-
 
NC_010322  PputGB1_3244  aldehyde dehydrogenase  27.74 
 
 
489 aa  72.8  0.00000000001  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_2305  putative delta-1-pyrroline-5-carboxylate dehydrogenase  24.24 
 
 
516 aa  73.2  0.00000000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.639726 
 
 
-
 
NC_005945  BAS0295  1-pyrroline-5-carboxylate dehydrogenase  23.7 
 
 
515 aa  72.8  0.00000000002  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_0129  betaine aldehyde dehydrogenase  27.08 
 
 
494 aa  72.8  0.00000000002  Desulfohalobium retbaense DSM 5692  Bacteria  hitchhiker  0.00429668  normal 
 
 
-
 
NC_013159  Svir_31700  aldehyde dehydrogenase (acceptor)  28.36 
 
 
495 aa  72.4  0.00000000002  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.465703  normal 
 
 
-
 
NC_010682  Rpic_1338  Aldehyde Dehydrogenase  26.8 
 
 
478 aa  72.8  0.00000000002  Ralstonia pickettii 12J  Bacteria  normal  normal  0.215169 
 
 
-
 
NC_013441  Gbro_3847  Aldehyde dehydrogenase (NAD(+))  23.91 
 
 
488 aa  72  0.00000000002  Gordonia bronchialis DSM 43247  Bacteria  normal  0.794962  n/a   
 
 
-
 
NC_011884  Cyan7425_2741  Aldehyde Dehydrogenase  25.8 
 
 
492 aa  72.4  0.00000000002  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A1420  aldehyde dehydrogenase  24.93 
 
 
531 aa  71.6  0.00000000003  Burkholderia xenovorans LB400  Bacteria  normal  0.0677446  normal 
 
 
-
 
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