| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_01930 |
|---|
| Symbol | |
|---|
| ID | 8371705 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | + |
|---|
| Start bp | 195268 |
|---|
| End bp | 197016 |
|---|
| Gene Length | 1749 bp |
|---|
| Protein Length | 582 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644990499 |
|---|
| Product | phenylacetic acid degradation protein paaN |
|---|
| Protein accession | YP_003148045 |
|---|
| Protein GI | 256824085 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | [TIGR02288] phenylacetic acid degradation protein paaN |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 58 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAGA CGACCGCGCC CACCCAGGCC ACCACGACCA CCCCGGCGAT CGTCCCCGAG
GGGGCCACGG CCCTGGTCGA GAAGCACCGC GACGCCCTGA CCGCCGCCAC CGCTGCCCTC
GAGGCCCGTT CGTTCCACAG CCGCTACAAC GAGTCGCCCT CCCCGAAGGT GCACGGCGAG
GACGCTGCCC CCAACGGGTT GAAGGCGCAC GAGGCCCACC TCGGCCAGAA GTTCTCCGCC
CTGGAGTCCC AGCCGTCCAC AGGCCAGTGG GTGGGCAGCG AGAAGTCCCC CTACGGCCCC
GAGCTCGGTG CCTCCTACCC GCAGCTCGAC GTGGACGCCG CGATGGCGGC CGCGACCACC
GCCCAGAAGG CGTGGCGCAA CGCCGGGCCC GAGGCCCGCG CCGCCGTCTG CGTGGAGATC
ATCGACCGCA TCAACGCCCG CGGCTTCGAG ATGGCCCAGG CCGTCATGCA CACCTCCGGC
CAGCCGTTCG TGATGGCCTT CCAGGCGGGC GGCCCGCACG CGCAGGACCG CGCGCTGGAG
GCCGTGACCG TCGCGCTCGC CGAGCAGCGG AAGGTCCCGG AGTCCGTCAT CTGGGAGAAG
CCGGCCAAGG GCGAGCCCAT CCGTATGCAG AAGGACTACC GCGTCATCGG CCGCGGCGTC
GGCCTGGTGA TCGGCTGCAA CACCTTCCCC ACCTGGAACG CCTACCCGGG CATCTTCGCC
TCGCTGGCCA CCGGCAACCC CGTGGTCGTC AAGCCGCACC CGCAGGCCGT GCTCCCATTG
GCCATCACCG TCGAGGTCGC CCGTGAGGTG CTCGCCGAGG CCGGTTTCGA TGCGGCGCTC
GTCCAGCTGG CGCCGGAGGA GACCGGTGGC ACGCTGGCCA AGGACCTGGC CCTGCACCCG
GCCGTGAAGA TCATCGACTA CACCGGCGGC CCGGGATTCG GCCACTGGCT GGAGACCGAG
GCCGCTGCCG CCGGCAAGCT CGTCTACACG GAGAAGGCCG GCCTGAACAC GGTGATCGTC
GACTCGGTGG AAACCATGCG TGCCGCCACC GGCAACCTCG CGTTCTCCTT CTCCCTCTAC
TCCGGCCAGA TGTGCACGGC GCCGCAGAAC GTGTACGTCA AGGCCTCCGG CATCAGCACC
GACGAGGGTG AGCTGACCGC CGAGGAATTC GCCGAGAAGC TCGGCCAGAC CATCACCGCC
TTCAACAAGG ACGACGCCAA GGCCGTCGAG ATCCTCGGTG CGACGGTGAA CGACGACGTC
CGCGGCCGCG CCAACGACTT CACCGGCCTC GCGAGCCGCC TCGGCGGCAC GCCGGTCCTG
GAGCCGCGCG AGGTGGAGCA CCCGGCCTTC CCGGAGGCCG TGGTCCGCAC GCCCGGCATC
ATCCTGCTGG AGTCCGACCA GCGCGACGCG TACAGCCAGG AGTGCTTCGG CCCGGTGGTC
TTCGTCATCA AGACCGACTC CACCGAGCAG TCCCTGCGGA TCGCCACCGA CACCATCCAG
GAGCACGGCG CCATGACCAT GGCCGTGTAC TCCACCGACG AGGAGGTGCT GGCCGACGCC
CGCGAGGCCG CCGCCGATGC CGGCGTCGCG CTCAGCGAGA ACCTGCAGGG CCAGGTCTTC
GTCAACCAGA CCGCGGCGTT CAGCGACTTC CACGGCACGG GCGCGAACCC GGCCGCGAAC
GCCGCCTACG CGGACGCGGC CTTCATCAGC AACCGCTTCC GCGTGGTGAC CACCCGCCGC
CACGTCTGA
|
|---|
| Protein sequence | MTETTAPTQA TTTTPAIVPE GATALVEKHR DALTAATAAL EARSFHSRYN ESPSPKVHGE
DAAPNGLKAH EAHLGQKFSA LESQPSTGQW VGSEKSPYGP ELGASYPQLD VDAAMAAATT
AQKAWRNAGP EARAAVCVEI IDRINARGFE MAQAVMHTSG QPFVMAFQAG GPHAQDRALE
AVTVALAEQR KVPESVIWEK PAKGEPIRMQ KDYRVIGRGV GLVIGCNTFP TWNAYPGIFA
SLATGNPVVV KPHPQAVLPL AITVEVAREV LAEAGFDAAL VQLAPEETGG TLAKDLALHP
AVKIIDYTGG PGFGHWLETE AAAAGKLVYT EKAGLNTVIV DSVETMRAAT GNLAFSFSLY
SGQMCTAPQN VYVKASGIST DEGELTAEEF AEKLGQTITA FNKDDAKAVE ILGATVNDDV
RGRANDFTGL ASRLGGTPVL EPREVEHPAF PEAVVRTPGI ILLESDQRDA YSQECFGPVV
FVIKTDSTEQ SLRIATDTIQ EHGAMTMAVY STDEEVLADA REAAADAGVA LSENLQGQVF
VNQTAAFSDF HGTGANPAAN AAYADAAFIS NRFRVVTTRR HV
|
|---|
| |