| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00811 |
|---|
| Symbol | |
|---|
| ID | 6305885 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | + |
|---|
| Start bp | 2417112 |
|---|
| End bp | 2418692 |
|---|
| Gene Length | 1581 bp |
|---|
| Protein Length | 526 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642639650 |
|---|
| Product | piperideine-6-carboxylate dehydrogenase |
|---|
| Protein accession | YP_001913510 |
|---|
| Protein GI | 188576581 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCCGGCC TTGCCGCCGC ACGACCGCCA CTGTTTCCAG GAGATCCCAT GTCCGCTGAC
CTGCTCAAGA CGCTCGACCT CGCTGCGTCC AATTCCGGTA CTTATCTTGG CGAGGCGACC
TGGTCGCAGG CCAGCGGCGC CGGGGTGCTG CAGCCGCTCA ATCCGACCAC CAATGCGGTG
ATCGCCGATG TGCAGGCCAC CACGCCCGAC GATTACGAAC TGATCATCCA GCGCGCGCAG
GCGGCCTTCA AGGTATGGCG GACCACGCCG GCGCCGCGTC GCGGCGAGGC GGTGCGTTTG
TGTGGCGAGG CGCTGCGTGC GCACAAGGAT GCGCTCGGTT CGCTGGTGGC GCTGGAAATG
GGCAAGAGCA AGCCCGAAGG CGATGGCGAA GTGCAGGAGA TGATCGACAT CGCCGATTTC
GCGGTCGGCC AGAGCCGCAT GCTCTATGGT TACACCATGC ATTCGGAACG CCCTGGCCAC
CGCATGTATG AGCAGTACCA GCCGCTGGGC CTGGTGGGCA TCATCAGCGC GTTCAACTTC
CCGGTGGCGG TGTGGGCCTG GAATGCGTTT TTGGCCGCGA TTTGCGGCGA TATCTGCATC
TGGAAGCCGT CCAACAAGAC GCCGCTGACC GCGATCGCGA CGATGAAGAT CTGCAACGCG
GCATTGAAGG ACGCCGGCTT CCCGGACATT TTCTTCCTGA TCAATGATGC CGGCACGTCG
CTGTCGGAAA AGCTGGTCGA AGACACGCGC GTGCCGCTGA TCAGCTTCAC CGGTTCGACC
CAGGTCGGCC GCGTGGTCGC CGAAAAGGTC GCCCATCGCC TGGGCCGCTG CCTGCTGGAA
CTGGGCGGCA ACAACGCCAT CATCCTGGAC GAAACCGCCG ACCTGAAGCT GGCCATCCCA
GGCATCGTGT TCGGCGCCGT CGGCACTGCC GGGCAGCGCT GCACCACCAC CCGCCGTCTG
ATCGTGCACG ACTCCATTTA TGACAACGTG CTGGCGACGC TGGCCAAAGC GTACAAGCAG
CTCGACAGCA AGATCGGCGA CCCCACCGAC CCGGCAAACC TGATGGGCCC GCTCAACAGC
CAGGGTGCGG TTGCACAGTT CCTCGACTCG ATCGCCCAGG CCAAGGCGGC CGGCGGCACG
GTGGAAGTGG GCGGCACGGC GATCGATCGC CCCGGCAACT TCGTGCTGCC GGCCATCGTC
ACCGGACTGC AGAACAGCGA CGCCGTCGTG CAGCACGAAA CCTTCGCGCC GATCCTGTAC
GTGATGAAGT ACAGCACGCT GGATGAAGCG ATCGAGCTGC AGAACGGCGT GCCGCAGGGC
CTGTCGTCGT CGATCTTCAC CCAGAACCTG AAGGCGGCCG AGAAGTTCCT GTCGGCGGCC
GGCAGCGATT GCGGCATCGC CAACGTCAAT ATCGGCACCT CGGGTGCGGA GATCGGCGGC
GCGTTCGGTG GCGAGAAGGA AACCGGAGGC GGTCGCGAGT CCGGCTCGGA TGCGTGGAAG
GTGTATATGC GTCGCCAGAC AAACACCATC AACTACTCCG ATTCGCTGCC GCTTGCCCAG
GGCATCAAGT TCGATCTTTG A
|
|---|
| Protein sequence | MAGLAAARPP LFPGDPMSAD LLKTLDLAAS NSGTYLGEAT WSQASGAGVL QPLNPTTNAV
IADVQATTPD DYELIIQRAQ AAFKVWRTTP APRRGEAVRL CGEALRAHKD ALGSLVALEM
GKSKPEGDGE VQEMIDIADF AVGQSRMLYG YTMHSERPGH RMYEQYQPLG LVGIISAFNF
PVAVWAWNAF LAAICGDICI WKPSNKTPLT AIATMKICNA ALKDAGFPDI FFLINDAGTS
LSEKLVEDTR VPLISFTGST QVGRVVAEKV AHRLGRCLLE LGGNNAIILD ETADLKLAIP
GIVFGAVGTA GQRCTTTRRL IVHDSIYDNV LATLAKAYKQ LDSKIGDPTD PANLMGPLNS
QGAVAQFLDS IAQAKAAGGT VEVGGTAIDR PGNFVLPAIV TGLQNSDAVV QHETFAPILY
VMKYSTLDEA IELQNGVPQG LSSSIFTQNL KAAEKFLSAA GSDCGIANVN IGTSGAEIGG
AFGGEKETGG GRESGSDAWK VYMRRQTNTI NYSDSLPLAQ GIKFDL
|
|---|
| |