| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0473 |
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| Symbol | |
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| ID | 6176283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 528395 |
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| End bp | 530101 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641680215 |
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| Product | phenylacetic acid degradation protein paaN |
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| Protein accession | YP_001807186 |
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| Protein GI | 172059534 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR02288] phenylacetic acid degradation protein paaN |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000197597 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.595687 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCATG CACTGTTCGC GAAGCACGAA GACACGCTGA AACACGCCCT CGCCGCCATC
GAGAGCCGCG GGTACTGGAG CCCGTTCGCG GAGATGCCGA GTCCCAAAGT GTACGGGGAA
AGCGCCAACG CGGAGGGTGA AGCGGCGTTC AAAGCACACC TCGGCAACAC GTTCGTGCTC
GACCAGCCGG CGTCCGGCGG AACCGTCGGC GCGGAGCAGT CGCCGTATGG GATCGCACTC
GGCATCCGCT ATCCGAAATC GACGCCCGAC GAGCTGATTG CAGCCGCGGC CGCTGCCCAG
CGGGCATGGC GCGAAGCCGG CCCGAGCGCG TGGATCGGCG TCAGCCTCGA AATCCTTGCG
CGGCTGAACC GTGCAAGCTT CGAGATTGCC TACAGCGTGA TGCACACCAC GGGCCAGGCG
TTCATGATGG CGTTCCAGGC CGGCGGCCCG CATGCGCAGG ATCGCGCACT CGAAGCGGTC
GCCTATGCGT GGGACGAACT GCGTCGCATC CCCGCCGATG CGCACTGGGA AAAGCCGCAA
GGCAAGAACC CGCCGCTCGC GATGCACAAG CGCTATACGA TCGTCCCGCG CGGCACCGGC
CTCGTGCTTG GCTGCTGCAC GTTCCCGACC TGGAACGGCT ACCCCGGCCT GTTCGCCGAC
CTGGCGACCG GCAACACGGT GATCGTCAAA CCGCACCCGG GTGCGATCCT GCCGCTCGCG
ATCACGGTCC GCATCGCCCG CGACGTGCTG CGCGAGGCCG GCTTCGATCC GAACGTCATC
ACGCTTCTCG CAACCGAGCC TAACGACGGC GCCCTCGTCC AGGACCTCGC GCTGCGTCCT
GAAATCAAGC TGATCGACTT CACGGGCAGC ACGCAAAACG GCACGTGGCT CGAACGCCAT
GCCCATCAGG CCCAGGTGTA TACGGAGAAG GCCGGCGTCA ACCAGATCGT GATCGACTCG
ACCGACGACC TGAAGGCCGC GGTGAAGAAC ATCGCGTTCT CGCTGGCGTT GTACTCCGGC
CAGATGTGTA CCGCACCGCA GAACATCTAC GTGCCGCGCG ACGGCATCCG GACGGCGGAC
GGCCACGCGA GCTTCGACGA AGTCGCGCAG GCGATCGCCG TGTCCGTGCA GAAGCTGACC
GGCGACCCGG CTCGCTCGGT CGAACTGATC GGCGCGATCC AGAACGACGG CGTGACCGCG
CGCATCGACG ATGCCCGCAA GCTCGGCCGC GTGCTCGCCG ACAGCCAGAC GCTCCAGCAC
CCGGCGTTCC CCGACGCGCG CGTGCGCACG CCGCTGGTGC TGCAGCTCGA CGTAGCCGAC
CGCGCGAAAT TCACGCAGGA GTGGTTCGGC CCGATCTCGT TCGTGATCGC GACCGACTCG
ACCGCCCAGT CGCTCGATCT CGCCGGCGAA ATCGCCGCGG AGCATGGCGC GCTGACGCTT
TCCGTTTATA GCATCGACGA CACGATCCTC GACGCCGCGC ACGATGCGGC GGTGCGTGGC
GGCGTCGCAC TGTCGATCAA CCTGACGGGT GGTGTGTTCG TCAACCAGTC GGCCGCGTTC
TCCGACTTCC ACGGCACCGG TGCGAACCCG GCCGCCAACG CGGCACTGGC CGACCCGGCG
TTCGTCGCCA ACCGGTTCCG CGTGGTGCAA AGCCGCGTCC ATGTTGCGCC GAAGGCAGTG
CCCGCGGAAG TCGGCCAGAC TGCATAA
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| Protein sequence | MTHALFAKHE DTLKHALAAI ESRGYWSPFA EMPSPKVYGE SANAEGEAAF KAHLGNTFVL
DQPASGGTVG AEQSPYGIAL GIRYPKSTPD ELIAAAAAAQ RAWREAGPSA WIGVSLEILA
RLNRASFEIA YSVMHTTGQA FMMAFQAGGP HAQDRALEAV AYAWDELRRI PADAHWEKPQ
GKNPPLAMHK RYTIVPRGTG LVLGCCTFPT WNGYPGLFAD LATGNTVIVK PHPGAILPLA
ITVRIARDVL REAGFDPNVI TLLATEPNDG ALVQDLALRP EIKLIDFTGS TQNGTWLERH
AHQAQVYTEK AGVNQIVIDS TDDLKAAVKN IAFSLALYSG QMCTAPQNIY VPRDGIRTAD
GHASFDEVAQ AIAVSVQKLT GDPARSVELI GAIQNDGVTA RIDDARKLGR VLADSQTLQH
PAFPDARVRT PLVLQLDVAD RAKFTQEWFG PISFVIATDS TAQSLDLAGE IAAEHGALTL
SVYSIDDTIL DAAHDAAVRG GVALSINLTG GVFVNQSAAF SDFHGTGANP AANAALADPA
FVANRFRVVQ SRVHVAPKAV PAEVGQTA
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