| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_2931 |
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| Symbol | putA |
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| ID | 5603358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | + |
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| Start bp | 3230331 |
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| End bp | 3234302 |
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| Gene Length | 3972 bp |
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| Protein Length | 1323 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640938472 |
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| Product | trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
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| Protein accession | YP_001479160 |
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| Protein GI | 157371171 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0506] Proline dehydrogenase
[COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
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| TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.637197 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCACTA CCACCATGGG CGTAAAGCTC GACGAGGCAA CTCGCGATCG CATCAAAAGC
GCAGCACAGC GTATCGATCG CACGCCGCAC TGGCTGATCA AGCAGGCCAT TTTTAATTAT
CTCGAGCGTC TCGAGAACGG TTCCGACATT CCTGAAATCC CTGCCACTGC CGCTGCCGGC
CAGGCCGAAG CGGACGACAT TATGCCGCAA CTGCAGGAAG AGTCCCACCA GCCATTCCTT
GAATTTGCTG AACAAATTCT GCCGCAGTCG GTCAACCGCG CGGCGATCAC CGCAGCCTAT
CGCCGTCCTG AGACCGAAGC GGTGCCGATG TTGCTCGAAC AGGCGCGCTT ACCTGCCGAT
CTCGCCAAAG CCACCCATAA GATGGCTTAC GATATTGCCG AGAAACTGCG TAACCAAAAG
AGTGCAAACG GCCGCGCCGG TATGGTGCAG GGCCTGCTGC AGGAGTTCTC CCTTTCCTCA
CAGGAAGGCG TGGCACTGAT GTGCCTGGCG GAAGCCCTGC TGCGTATTCC TGACAAACCA
ACCCGTGACG CGCTGATCCG CGACAAAATC AGCAACGGCA ACTGGCATTC TCACCTTGGC
CGTAGCCCGT CGCTGTTCGT TAACGCCGCC ACCTGGGGCC TGCTGTTTAC CGGCAAACTG
GTCGCGACCC ATAACGAAGC CAATCTGTCG CGCTCACTGA ACCGTATTAT CGGCAAGAGC
GGTGAACCGC TGATCCGTAA AGGCGTGGAC ATGGCGATGC GCCTGATGGG CGAACAGTTC
GTGACCGGTG AAACCATCGC CGAAGCGCTG GCCAACGCCC GCAAGCTGGA AGACAAAGGT
TTCCGCTACT CCTACGATAT GCTGGGTGAA GCCGCGCTGA CCGAAGCCGA CGCGCAAGCC
TACCTGGTGT CTTACCAGCA GGCGATCCAC GCCATCGGCA AGGCCTCTAA CGGCCGCGGG
ATCTATGAAG GCCCGGGCAT TTCGATCAAG CTTTCCGCCT TGCATCCCCG CTACAGCCGT
GCGCAGTACG AACGCGTAAT GGAAGAGCTT TACCCTCGCC TGCTGTCATT GACCCTGCAA
GCGCGCCAAT ATGATATCGG CATCAATATC GACGCCGAAG AAGCCGACCG CCTGGAGATC
TCACTCGATC TGCTGGAGAA GCTGTGCTTT GAACCACAGT TGGCCGGCTG GAACGGTATC
GGTTTCGTGA TCCAGGCTTA TCAAAAGCGC TGCCCGTTCG CCATCGACGC CGTGATCGAC
ATGGCGCAGC GCAGCCGTCG TCGCCTGATG ATCCGTCTGG TGAAAGGTGC CTACTGGGAC
AGCGAAATCA AACGCGCCCA AATGGACGGG TTGGAAGGCT ATCCGGTTTA CACCCGCAAG
GTTTACACCG ACGTTTCCTA CCTGGCCTGC GCCCGCAAAC TGCTGGCGGT GCCAAACCTG
ATTTATCCGC AATTTGCTAC CCATAACGCC CACACCCTGA GCGCGATTTA CCATATGGCG
GGCAACAACT ACTACCCAGG CCAGTATGAG TTCCAGTGTC TGCACGGCAT GGGTGAACCT
TTGTATGAGC AGGTGGTGGG TAAAGTAGCC GACGGCAAGT TAAACCGTCC GTGTCGCATC
TATGCTCCGG TCGGTACCCA TGAAACGCTG CTGGCGTACC TGGTGCGCCG CCTGCTGGAA
AACGGGGCCA ACACCTCATT CGTTAACCGT ATCGCCGACG CTACTCTGCC GCTCGACGAA
CTGGTGGCCG ATCCGGTCAC CGCCGTTGAA GCCATGGCGG CCAGCGAAGG GCAAATTGGC
CTGCCGCACC CGCGTATCCC GCTGCCGCGT GAGCTGTATG GCGATAAACG TACCAACTCC
AGCGGTCTGG ATCTGTCCAA CGAACAGCGT CTGGCGTCAC TGTCCAGCGC ATTGCTGACC
AGCGCCACAC AGCCATGGCG CGCCGAACCG ATTATCGATG CCGAGCTGGA TCAGGGCGTG
GAACAACCGG TAATTAACCC TGCCGAACCG GGCGATATCG TCGGTTACGT GCGTGAAGCC
ACCGAAGGGG AAGTCAGCCG GGCGCTCGAC GCCGCTGCCG CTGCCGGCCC AATCTGGTTC
GCCACCCCGC CGTCCGAACG CGCCGCCATT CTTGAACGCG CCGCTGAACT GATGGAAGGC
CAGCTGCAAA GCCTGCTGGG TATTCTGGTA CGCGAAGCGG GTAAAACCTT CAATAACGCC
ATTGCCGAAG TGCGTGAAGC GGTCGATTTC CTGCATTACT ACGCCGGTCA GGTACGCGAT
GACTTCGCCA ATGACAGCCA CCGTCCACTG GGCCCGGTGG TTTGTATCAG CCCGTGGAAC
TTCCCGCTGG CGATCTTTAC CGGCCAGATT GCCGCTGCGC TGGCGGCCGG CAACAGCGTG
CTGGCCAAAC CGGCCGAGCA AACCCCGCTG ATCGCCGCAC AGGCGGTACG TATTCTGCTG
GAAGCCGGCA TTCCACCAGG CGTGCTGCAA CTGCTGCCAG GCCAGGGTGA AAGCGTCGGC
TCGGTGCTGG TCAATGATGC CCGCGTGCGT GGCGTGATGT TTACCGGCTC TACCGACGTT
GCCGGTATTC TGCAACGCAA TATCGCCGGT CGTCTGGATC CGCAAGGTCG CCCAACGCCG
CTGATCGCCG AAACCGGTGG TCTGAACGCG ATGATCGTCG ACTCTTCCGC CCTGACCGAA
CAGGTGGTGA CGGACGTGGT CGCCTCCGCC TTCGACAGTG CCGGCCAGCG TTGTTCTGCC
CTGCGTATCC TGTGCATTCA GGAAGACGTG GCGGACCATA CGTTGCAAAT GCTGCGCGGT
GCGATGGCCG AGTGCCGCAT GGGTAACCCG GAACGCCTGT CTACCGACAT CGGGCCGGTG
ATCGACGCCG AGGCCAAAAC CGGTATCGAA CGCCATATCC AGGCGATGCG CGCCAAGGGC
CGCAAGGTCT ATCAGGCGGC GAAAGGCAAT GCGCAGGATG AGAAAGAGTG GTCACGCGGC
ACCTTTATCA AGCCAACGCT GATCGAACTG GACAGCTTCG ACGAGCTGCA AAAAGAGATC
TTCGGCCCGG TACTGCACGT GGTGCGCTTC CAGCGCTCGA ATATGGAATC GCTTGTCGAT
CAGATCAACG CCGCCGGTTA TGGCCTGACG CTGGGTATCC ACACCCGTAT CGACGAGACC
ATTGCCCGCG TCACCGAACG CGCCAAGGTC GGTAACCTGT ACGTTAACCG TAACATGGTC
GGTGCCGTGG TCGGCGTGCA GCCGTTTGGT GGCGAAGGCC TGTCCGGCAC CGGTCCGAAA
GCCGGTGGCC CACTGTATCT GTACCGCTTG CTGGCCAACC GTCCGGATGA CGCAGTGCTG
CGTACCCTGA ACCGTCAGGA CGACGAGCGC CCGCTGGAGG CTACCGCACG GCCACAACTG
CTCAAAGCCC ATCAGGCTCT GGAGCAATGG GCCGTTGCCG AAAAACAATC TGAGTTGGTG
ACGCTGGCAC AACGCTACGC CGAACTGGGC CAGGGCGGCA CCCTGCGCCC TCTGCCAGGC
CCGACCGGCG AGCGCAATAC CTACGCCCTG CTGCCGCGTG AGCGGGTACT GTGCCTGGCC
GATAACGAAG CCGATGCTCT GACGCAACTG GCTGCGGTAC TGGCCGTGGG CAGCAGCGTG
CTGTGGCCGG AAGCCGAGCT GCAACGCGCC CTGTATCGCC GCCTGCCGGC CGCGGTTCAG
GCCAGCATCA GTTTCAGCAA GGACTGGCAG CAGGACAAGG TGGAGTTTGA CGCCGCCATT
TACCACGGCG ACGCCGATCA GTTGCGTACC CTGTGCGAGC AAATTGCCCA GCGCAGCGGC
GCGATCGTTT CGGTGCAGGG CTTTGCCCAC GGCGAGACCA ATATCCTGTT GGAACGCCTG
CTGATCGAAC GCTCGCTGAG TGTCAACACC GCAGCCGCCG GCGGTAACGC CAGCCTGATG
ACCATTGGTT AA
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| Protein sequence | MGTTTMGVKL DEATRDRIKS AAQRIDRTPH WLIKQAIFNY LERLENGSDI PEIPATAAAG
QAEADDIMPQ LQEESHQPFL EFAEQILPQS VNRAAITAAY RRPETEAVPM LLEQARLPAD
LAKATHKMAY DIAEKLRNQK SANGRAGMVQ GLLQEFSLSS QEGVALMCLA EALLRIPDKP
TRDALIRDKI SNGNWHSHLG RSPSLFVNAA TWGLLFTGKL VATHNEANLS RSLNRIIGKS
GEPLIRKGVD MAMRLMGEQF VTGETIAEAL ANARKLEDKG FRYSYDMLGE AALTEADAQA
YLVSYQQAIH AIGKASNGRG IYEGPGISIK LSALHPRYSR AQYERVMEEL YPRLLSLTLQ
ARQYDIGINI DAEEADRLEI SLDLLEKLCF EPQLAGWNGI GFVIQAYQKR CPFAIDAVID
MAQRSRRRLM IRLVKGAYWD SEIKRAQMDG LEGYPVYTRK VYTDVSYLAC ARKLLAVPNL
IYPQFATHNA HTLSAIYHMA GNNYYPGQYE FQCLHGMGEP LYEQVVGKVA DGKLNRPCRI
YAPVGTHETL LAYLVRRLLE NGANTSFVNR IADATLPLDE LVADPVTAVE AMAASEGQIG
LPHPRIPLPR ELYGDKRTNS SGLDLSNEQR LASLSSALLT SATQPWRAEP IIDAELDQGV
EQPVINPAEP GDIVGYVREA TEGEVSRALD AAAAAGPIWF ATPPSERAAI LERAAELMEG
QLQSLLGILV REAGKTFNNA IAEVREAVDF LHYYAGQVRD DFANDSHRPL GPVVCISPWN
FPLAIFTGQI AAALAAGNSV LAKPAEQTPL IAAQAVRILL EAGIPPGVLQ LLPGQGESVG
SVLVNDARVR GVMFTGSTDV AGILQRNIAG RLDPQGRPTP LIAETGGLNA MIVDSSALTE
QVVTDVVASA FDSAGQRCSA LRILCIQEDV ADHTLQMLRG AMAECRMGNP ERLSTDIGPV
IDAEAKTGIE RHIQAMRAKG RKVYQAAKGN AQDEKEWSRG TFIKPTLIEL DSFDELQKEI
FGPVLHVVRF QRSNMESLVD QINAAGYGLT LGIHTRIDET IARVTERAKV GNLYVNRNMV
GAVVGVQPFG GEGLSGTGPK AGGPLYLYRL LANRPDDAVL RTLNRQDDER PLEATARPQL
LKAHQALEQW AVAEKQSELV TLAQRYAELG QGGTLRPLPG PTGERNTYAL LPRERVLCLA
DNEADALTQL AAVLAVGSSV LWPEAELQRA LYRRLPAAVQ ASISFSKDWQ QDKVEFDAAI
YHGDADQLRT LCEQIAQRSG AIVSVQGFAH GETNILLERL LIERSLSVNT AAAGGNASLM
TIG
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