Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_2931 |
Symbol | putA |
ID | 5603358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 3230331 |
End bp | 3234302 |
Gene Length | 3972 bp |
Protein Length | 1323 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640938472 |
Product | trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
Protein accession | YP_001479160 |
Protein GI | 157371171 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0506] Proline dehydrogenase [COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.637197 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCACTA CCACCATGGG CGTAAAGCTC GACGAGGCAA CTCGCGATCG CATCAAAAGC GCAGCACAGC GTATCGATCG CACGCCGCAC TGGCTGATCA AGCAGGCCAT TTTTAATTAT CTCGAGCGTC TCGAGAACGG TTCCGACATT CCTGAAATCC CTGCCACTGC CGCTGCCGGC CAGGCCGAAG CGGACGACAT TATGCCGCAA CTGCAGGAAG AGTCCCACCA GCCATTCCTT GAATTTGCTG AACAAATTCT GCCGCAGTCG GTCAACCGCG CGGCGATCAC CGCAGCCTAT CGCCGTCCTG AGACCGAAGC GGTGCCGATG TTGCTCGAAC AGGCGCGCTT ACCTGCCGAT CTCGCCAAAG CCACCCATAA GATGGCTTAC GATATTGCCG AGAAACTGCG TAACCAAAAG AGTGCAAACG GCCGCGCCGG TATGGTGCAG GGCCTGCTGC AGGAGTTCTC CCTTTCCTCA CAGGAAGGCG TGGCACTGAT GTGCCTGGCG GAAGCCCTGC TGCGTATTCC TGACAAACCA ACCCGTGACG CGCTGATCCG CGACAAAATC AGCAACGGCA ACTGGCATTC TCACCTTGGC CGTAGCCCGT CGCTGTTCGT TAACGCCGCC ACCTGGGGCC TGCTGTTTAC CGGCAAACTG GTCGCGACCC ATAACGAAGC CAATCTGTCG CGCTCACTGA ACCGTATTAT CGGCAAGAGC GGTGAACCGC TGATCCGTAA AGGCGTGGAC ATGGCGATGC GCCTGATGGG CGAACAGTTC GTGACCGGTG AAACCATCGC CGAAGCGCTG GCCAACGCCC GCAAGCTGGA AGACAAAGGT TTCCGCTACT CCTACGATAT GCTGGGTGAA GCCGCGCTGA CCGAAGCCGA CGCGCAAGCC TACCTGGTGT CTTACCAGCA GGCGATCCAC GCCATCGGCA AGGCCTCTAA CGGCCGCGGG ATCTATGAAG GCCCGGGCAT TTCGATCAAG CTTTCCGCCT TGCATCCCCG CTACAGCCGT GCGCAGTACG AACGCGTAAT GGAAGAGCTT TACCCTCGCC TGCTGTCATT GACCCTGCAA GCGCGCCAAT ATGATATCGG CATCAATATC GACGCCGAAG AAGCCGACCG CCTGGAGATC TCACTCGATC TGCTGGAGAA GCTGTGCTTT GAACCACAGT TGGCCGGCTG GAACGGTATC GGTTTCGTGA TCCAGGCTTA TCAAAAGCGC TGCCCGTTCG CCATCGACGC CGTGATCGAC ATGGCGCAGC GCAGCCGTCG TCGCCTGATG ATCCGTCTGG TGAAAGGTGC CTACTGGGAC AGCGAAATCA AACGCGCCCA AATGGACGGG TTGGAAGGCT ATCCGGTTTA CACCCGCAAG GTTTACACCG ACGTTTCCTA CCTGGCCTGC GCCCGCAAAC TGCTGGCGGT GCCAAACCTG ATTTATCCGC AATTTGCTAC CCATAACGCC CACACCCTGA GCGCGATTTA CCATATGGCG GGCAACAACT ACTACCCAGG CCAGTATGAG TTCCAGTGTC TGCACGGCAT GGGTGAACCT TTGTATGAGC AGGTGGTGGG TAAAGTAGCC GACGGCAAGT TAAACCGTCC GTGTCGCATC TATGCTCCGG TCGGTACCCA TGAAACGCTG CTGGCGTACC TGGTGCGCCG CCTGCTGGAA AACGGGGCCA ACACCTCATT CGTTAACCGT ATCGCCGACG CTACTCTGCC GCTCGACGAA CTGGTGGCCG ATCCGGTCAC CGCCGTTGAA GCCATGGCGG CCAGCGAAGG GCAAATTGGC CTGCCGCACC CGCGTATCCC GCTGCCGCGT GAGCTGTATG GCGATAAACG TACCAACTCC AGCGGTCTGG ATCTGTCCAA CGAACAGCGT CTGGCGTCAC TGTCCAGCGC ATTGCTGACC AGCGCCACAC AGCCATGGCG CGCCGAACCG ATTATCGATG CCGAGCTGGA TCAGGGCGTG GAACAACCGG TAATTAACCC TGCCGAACCG GGCGATATCG TCGGTTACGT GCGTGAAGCC ACCGAAGGGG AAGTCAGCCG GGCGCTCGAC GCCGCTGCCG CTGCCGGCCC AATCTGGTTC GCCACCCCGC CGTCCGAACG CGCCGCCATT CTTGAACGCG CCGCTGAACT GATGGAAGGC CAGCTGCAAA GCCTGCTGGG TATTCTGGTA CGCGAAGCGG GTAAAACCTT CAATAACGCC ATTGCCGAAG TGCGTGAAGC GGTCGATTTC CTGCATTACT ACGCCGGTCA GGTACGCGAT GACTTCGCCA ATGACAGCCA CCGTCCACTG GGCCCGGTGG TTTGTATCAG CCCGTGGAAC TTCCCGCTGG CGATCTTTAC CGGCCAGATT GCCGCTGCGC TGGCGGCCGG CAACAGCGTG CTGGCCAAAC CGGCCGAGCA AACCCCGCTG ATCGCCGCAC AGGCGGTACG TATTCTGCTG GAAGCCGGCA TTCCACCAGG CGTGCTGCAA CTGCTGCCAG GCCAGGGTGA AAGCGTCGGC TCGGTGCTGG TCAATGATGC CCGCGTGCGT GGCGTGATGT TTACCGGCTC TACCGACGTT GCCGGTATTC TGCAACGCAA TATCGCCGGT CGTCTGGATC CGCAAGGTCG CCCAACGCCG CTGATCGCCG AAACCGGTGG TCTGAACGCG ATGATCGTCG ACTCTTCCGC CCTGACCGAA CAGGTGGTGA CGGACGTGGT CGCCTCCGCC TTCGACAGTG CCGGCCAGCG TTGTTCTGCC CTGCGTATCC TGTGCATTCA GGAAGACGTG GCGGACCATA CGTTGCAAAT GCTGCGCGGT GCGATGGCCG AGTGCCGCAT GGGTAACCCG GAACGCCTGT CTACCGACAT CGGGCCGGTG ATCGACGCCG AGGCCAAAAC CGGTATCGAA CGCCATATCC AGGCGATGCG CGCCAAGGGC CGCAAGGTCT ATCAGGCGGC GAAAGGCAAT GCGCAGGATG AGAAAGAGTG GTCACGCGGC ACCTTTATCA AGCCAACGCT GATCGAACTG GACAGCTTCG ACGAGCTGCA AAAAGAGATC TTCGGCCCGG TACTGCACGT GGTGCGCTTC CAGCGCTCGA ATATGGAATC GCTTGTCGAT CAGATCAACG CCGCCGGTTA TGGCCTGACG CTGGGTATCC ACACCCGTAT CGACGAGACC ATTGCCCGCG TCACCGAACG CGCCAAGGTC GGTAACCTGT ACGTTAACCG TAACATGGTC GGTGCCGTGG TCGGCGTGCA GCCGTTTGGT GGCGAAGGCC TGTCCGGCAC CGGTCCGAAA GCCGGTGGCC CACTGTATCT GTACCGCTTG CTGGCCAACC GTCCGGATGA CGCAGTGCTG CGTACCCTGA ACCGTCAGGA CGACGAGCGC CCGCTGGAGG CTACCGCACG GCCACAACTG CTCAAAGCCC ATCAGGCTCT GGAGCAATGG GCCGTTGCCG AAAAACAATC TGAGTTGGTG ACGCTGGCAC AACGCTACGC CGAACTGGGC CAGGGCGGCA CCCTGCGCCC TCTGCCAGGC CCGACCGGCG AGCGCAATAC CTACGCCCTG CTGCCGCGTG AGCGGGTACT GTGCCTGGCC GATAACGAAG CCGATGCTCT GACGCAACTG GCTGCGGTAC TGGCCGTGGG CAGCAGCGTG CTGTGGCCGG AAGCCGAGCT GCAACGCGCC CTGTATCGCC GCCTGCCGGC CGCGGTTCAG GCCAGCATCA GTTTCAGCAA GGACTGGCAG CAGGACAAGG TGGAGTTTGA CGCCGCCATT TACCACGGCG ACGCCGATCA GTTGCGTACC CTGTGCGAGC AAATTGCCCA GCGCAGCGGC GCGATCGTTT CGGTGCAGGG CTTTGCCCAC GGCGAGACCA ATATCCTGTT GGAACGCCTG CTGATCGAAC GCTCGCTGAG TGTCAACACC GCAGCCGCCG GCGGTAACGC CAGCCTGATG ACCATTGGTT AA
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Protein sequence | MGTTTMGVKL DEATRDRIKS AAQRIDRTPH WLIKQAIFNY LERLENGSDI PEIPATAAAG QAEADDIMPQ LQEESHQPFL EFAEQILPQS VNRAAITAAY RRPETEAVPM LLEQARLPAD LAKATHKMAY DIAEKLRNQK SANGRAGMVQ GLLQEFSLSS QEGVALMCLA EALLRIPDKP TRDALIRDKI SNGNWHSHLG RSPSLFVNAA TWGLLFTGKL VATHNEANLS RSLNRIIGKS GEPLIRKGVD MAMRLMGEQF VTGETIAEAL ANARKLEDKG FRYSYDMLGE AALTEADAQA YLVSYQQAIH AIGKASNGRG IYEGPGISIK LSALHPRYSR AQYERVMEEL YPRLLSLTLQ ARQYDIGINI DAEEADRLEI SLDLLEKLCF EPQLAGWNGI GFVIQAYQKR CPFAIDAVID MAQRSRRRLM IRLVKGAYWD SEIKRAQMDG LEGYPVYTRK VYTDVSYLAC ARKLLAVPNL IYPQFATHNA HTLSAIYHMA GNNYYPGQYE FQCLHGMGEP LYEQVVGKVA DGKLNRPCRI YAPVGTHETL LAYLVRRLLE NGANTSFVNR IADATLPLDE LVADPVTAVE AMAASEGQIG LPHPRIPLPR ELYGDKRTNS SGLDLSNEQR LASLSSALLT SATQPWRAEP IIDAELDQGV EQPVINPAEP GDIVGYVREA TEGEVSRALD AAAAAGPIWF ATPPSERAAI LERAAELMEG QLQSLLGILV REAGKTFNNA IAEVREAVDF LHYYAGQVRD DFANDSHRPL GPVVCISPWN FPLAIFTGQI AAALAAGNSV LAKPAEQTPL IAAQAVRILL EAGIPPGVLQ LLPGQGESVG SVLVNDARVR GVMFTGSTDV AGILQRNIAG RLDPQGRPTP LIAETGGLNA MIVDSSALTE QVVTDVVASA FDSAGQRCSA LRILCIQEDV ADHTLQMLRG AMAECRMGNP ERLSTDIGPV IDAEAKTGIE RHIQAMRAKG RKVYQAAKGN AQDEKEWSRG TFIKPTLIEL DSFDELQKEI FGPVLHVVRF QRSNMESLVD QINAAGYGLT LGIHTRIDET IARVTERAKV GNLYVNRNMV GAVVGVQPFG GEGLSGTGPK AGGPLYLYRL LANRPDDAVL RTLNRQDDER PLEATARPQL LKAHQALEQW AVAEKQSELV TLAQRYAELG QGGTLRPLPG PTGERNTYAL LPRERVLCLA DNEADALTQL AAVLAVGSSV LWPEAELQRA LYRRLPAAVQ ASISFSKDWQ QDKVEFDAAI YHGDADQLRT LCEQIAQRSG AIVSVQGFAH GETNILLERL LIERSLSVNT AAAGGNASLM TIG
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