Gene Rpic_1338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1338 
Symbol 
ID6286081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1431886 
End bp1433322 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content66% 
IMG OID642624907 
ProductAldehyde Dehydrogenase 
Protein accessionYP_001898913 
Protein GI187928426 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.215169 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCAAC GCGACAAGCT TTTTATCAAT GGCAAGTGGG TGGCGCCGCA GGGCAAGGGC 
GTCATTGAAG TGATTCATTC GGCCACGGAA GCCGTGATGG GGACCATTCC CGAAGGCAGC
GCGGCCGACG CGGAAGCCGC CGTGGCCGCC GCGCGCGCCG CATTTGATGA CTGGGCTGCC
ACGCCCGTGA CCAAGCGCGC CGAATACATC CAGAAGATTG CCGACGGCCT GCATGCCCGC
AGCGAAGAGC TGGCGCAGCT GATTGCCGGC GAAGTCGGCA TGCCGATCAA GCTGGCGCGT
GCCATCCAGG TGGGCGGCCC GGTCTACAAC TGGGGCAATT TCGCCAAGCT GCTCAGCACG
TTTGAATTTG AAGAGCACGT CGGCAACTCG CTGGTGGTGC GCGAGCCCGT GGGCGTGGTG
GGCGCCATCA CGCCGTGGAA CTACCCGCTC AACCAGATCA CGCTGAAGGT TGCGCCCGCG
CTGGCGGCCG GCTGCACGGT GGTGCTCAAG CCGTCGGAAG TGGCACCGCT CAACGCGTTC
GTGCTGGCGG AAGTCATTGA AGAAGCCGGC TTGCCGCCGG GCGTGTTCAA CCTTGTCACC
GGCTATGGCC CGGTGGTGGG CGAGGTGCTG GCAAGCGACC CGGAGGTCGA CATGGTGTCG
TTCACGGGCT CCACGCGTGC GGGCAAGCGC GTGGCGGAAC TCGCATCGCA GTCGGTCAAG
CGGGTGGCGC TGGAGCTGGG CGGCAAGTCG GCCTCGGTGA TCCTGGATGA CGCGGACCTG
GCATCGGCGG TCAAGGGCAC GCTGTCGGCG TGTTTCCTGA ACTCCGGGCA GACGTGCTCG
GCGCACACGC GCATGCTGGT GCCGCGTGCC AAGTATGAAG AAGTGAAGGC GCTGGCCGCG
CAGTTTGCCG CTGCCTACGT GCCGGGCGAT CCGGCGCAGG AATCGACGCG CCTGGGGCCG
CTCATCTCTG CCGTGCAGCG CGACCGCGTG CTGGGCTACA TCCGCAAGGG GCTGGAGGAG
GGCGCGGAAC TCATTACCGG GGGCGCCGAC GCGCCGGAAG GCCTGTCCAC CGGTTACTTT
GTCAAGCCGA CGGTGCTGGG TAACGTGAAG ACCACCGACA CCGTGGCGCG CGAAGAGATC
TTCGGCCCTG TGCTGACCGT GATCTGCTAC GACGACGAGG AAGAGGCCGT CCGCATTGCC
AACGACAGCA TCTACGGCCT GGGCGGCGGT GTGTGGTCGG GCGACGAGGC GCGGGCGATT
CGCGTGGCGC GGCGCATTCG CACGGGCCAG GTCAATATCA ACGGCGGGCC GTTCAACATG
CAGGCGCCGT TTGGCGGCTA CAAGCAATCC GGCAACGGGC GCGAGAACGG CAAGTACGGC
CTGGAGGAGT TCCTGGAGTA CAAGGCGCTG CAACTCAATC CCGCCAAGAC GGCCTGA
 
Protein sequence
MQQRDKLFIN GKWVAPQGKG VIEVIHSATE AVMGTIPEGS AADAEAAVAA ARAAFDDWAA 
TPVTKRAEYI QKIADGLHAR SEELAQLIAG EVGMPIKLAR AIQVGGPVYN WGNFAKLLST
FEFEEHVGNS LVVREPVGVV GAITPWNYPL NQITLKVAPA LAAGCTVVLK PSEVAPLNAF
VLAEVIEEAG LPPGVFNLVT GYGPVVGEVL ASDPEVDMVS FTGSTRAGKR VAELASQSVK
RVALELGGKS ASVILDDADL ASAVKGTLSA CFLNSGQTCS AHTRMLVPRA KYEEVKALAA
QFAAAYVPGD PAQESTRLGP LISAVQRDRV LGYIRKGLEE GAELITGGAD APEGLSTGYF
VKPTVLGNVK TTDTVAREEI FGPVLTVICY DDEEEAVRIA NDSIYGLGGG VWSGDEARAI
RVARRIRTGQ VNINGGPFNM QAPFGGYKQS GNGRENGKYG LEEFLEYKAL QLNPAKTA