| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2305 |
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| Symbol | |
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| ID | 5539786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2971655 |
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| End bp | 2973205 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640894438 |
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| Product | putative delta-1-pyrroline-5-carboxylate dehydrogenase |
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| Protein accession | YP_001432406 |
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| Protein GI | 156742277 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01237] delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.639726 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCTCC CGCCATTTCG GAATGAACCA CCCACCGATT TCAACGATCC CGCCAATGTC
GCCGCGATGG AGCAGGCGCT GGCGGATGTC CGCGCGCAGT TTGGGCGCGC TTATCCGATC
ATTATCGACG GTGAGCGCAT CACCACCGGC GCGACGATTG CTTCCGTCAA CCCAGCGCGT
CCTTCAGAGG TCGTTGGGTA TGCGGCGAGC GCCGATGTGA CGCTAGCGCA ACGCGCCATC
GAAACGGCGC ACCGCCGCTT CGCCGAATGG CGGCGCGTCC CGGTCGAGCA GCGCGTCGAA
CTGCTGTTGA AGGCGGCAGC CGCCATGCGC GCGCGTCGCT TCGAATTGAA CGCCTGGATT
ATTTATGAGG TCAGCAAGAG TTGGGCGGAG GCGGATGCCG ATGTTGCCGA GGCGATCGAC
TTCTGCGAGT TCTATGCGCG CGAAATGCTG CGCCTGAGCG AACCGCAACC GCTCTACCCC
ATCCCCGGCG AAGATGACCG CCTGACCTAT ATTCCGCTCG GCGCCGGGGT CGCCATTCCG
CCGTGGAACT TCCCGCTCGC TATTATGGTC GGGCTGGTGA CCGCGCCGGT CGTCGCCGGG
AACACGATTG TGCTCAAGCC TGCCTCGACT TCGCCGATTA TTGCGGCGAA GTTTATGGAG
ATCATGGAGG AGTGCGGCGT GCCTCCTGGC GTGGTCAATT ATCTTCCCGG TCCCGGCAGC
AGCGTCGGCG ATACGCTGGT CGATCATCCG CTCACGCGCT TTATCGGTTT CACCGGATCG
AAAGATGTTG GCATCCGCAT CTTTGAGCGC GCCGCAAAGG TGCATCCCGG TCAGAAATGG
CTCAAGCGCA CCATTCTGGA GATGGGTGGC AAGGATACCA TCATTGTGGA CGAAACGGCG
GACCTGGAAG CGGCTGCATC TGGGGTTGTC ACTTCCGCAT TCGGATTCCA GGGGCAGAAG
TGCTCCGCCT GCTCGCGGGT CGTGGCGGTC GAGCCGGTCT ACGATGAACT GCTCGACCGG
GTGATCGAAC TGACGGGCGG GTTGACGGTT GGCGATCCGG CGCAGCGCGG GACGTTCATG
GGCGCGGTCA TCGACGAACG TTCGCGCGAG AAGATTCGCT GGTATATCGA GGAAGGCGTG
CGCGAAGGGG GACGGCTGGC GTTCAGCGGC GATGCACCGG GTGACGGGTT CTTTGTGCCG
CCCACGATCA TCGCCGATGT TGACCCCAAT GCGCGCATTT CCCAGGAGGA AATCTTTGGT
CCGGTGCTGG CATTTATCAA GGCGCGCGAC TTCGATGAGG CGCTGGCGAT TGCCAACAAT
ACCGAGTACG GTCTGACCGG CGGGGTCTAC TCGCGCTCGC GTGAGCGGTT GGAGCGTGCG
CGCGACGAGT TCCACGTTGG CAATCTTTAT TTCAACCGCA AGATCACCGG CGCGATGGTC
GGCGCGCATC CGTTTGGCGG CTTCAACATG TCGGGCACCG ACTCGAAGGC TGGCGGGCGC
GATTATCTGC TCCTCTTCCT GCAAGCCAAG ACGGTAGCCG AGAAACTGTG A
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| Protein sequence | MDLPPFRNEP PTDFNDPANV AAMEQALADV RAQFGRAYPI IIDGERITTG ATIASVNPAR
PSEVVGYAAS ADVTLAQRAI ETAHRRFAEW RRVPVEQRVE LLLKAAAAMR ARRFELNAWI
IYEVSKSWAE ADADVAEAID FCEFYAREML RLSEPQPLYP IPGEDDRLTY IPLGAGVAIP
PWNFPLAIMV GLVTAPVVAG NTIVLKPAST SPIIAAKFME IMEECGVPPG VVNYLPGPGS
SVGDTLVDHP LTRFIGFTGS KDVGIRIFER AAKVHPGQKW LKRTILEMGG KDTIIVDETA
DLEAAASGVV TSAFGFQGQK CSACSRVVAV EPVYDELLDR VIELTGGLTV GDPAQRGTFM
GAVIDERSRE KIRWYIEEGV REGGRLAFSG DAPGDGFFVP PTIIADVDPN ARISQEEIFG
PVLAFIKARD FDEALAIANN TEYGLTGGVY SRSRERLERA RDEFHVGNLY FNRKITGAMV
GAHPFGGFNM SGTDSKAGGR DYLLLFLQAK TVAEKL
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