| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0448 |
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| Symbol | |
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| ID | 4311652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 499330 |
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| End bp | 501036 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638148236 |
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| Product | phenylacetic acid degradation protein paaN |
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| Protein accession | YP_772341 |
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| Protein GI | 115350502 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR02288] phenylacetic acid degradation protein paaN |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.024942 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCATG CACTGTTCAC GAAGCACGAA GACACGCTGA AACACGCCCT CGCCGCCATC
GAGAGCCGCG GGTACTGGAG CCCGTTCGCG GAGATGCCGA GTCCCAAAGT GTACGGGGAA
AGCGCCAACG CCGATGGCGA AGCGGCGTTC AAAGCACACC TCGGCAACAC GTTCGTGCTC
GACCAGCCGG CGTCCGCCGG GACCGTGGGC GCGGAGCAGT CGCCGTACGG GATCGCACTC
GGCGTCCGCT ATCCGAAATC GACGCCCGAC GAGCTGATTG CAGCGGCCGC AGCTGCCCAG
CGGGCATGGC GCGAAGCCGG CCCGAGCGCG TGGATCGGCG TCAGCCTCGA AATCCTTGCG
CGGCTGAACC GTGCAAGCTT CGAGATTGCC TACAGCGTGA TGCACACCAC GGGCCAGGCG
TTCATGATGG CGTTCCAGGC CGGCGGCCCG CATGCGCAGG ATCGCGCACT CGAAGCAGTC
GCCTATGCGT GGGACGAACT GCGTCGCATC CCTGCCGATG CGCACTGGGA AAAGCCGCAA
GGCAAGAACC CGCCGCTCGC GATGCACAAG CGCTATACGA TCGTCCCGCG CGGCACCGGC
CTCGTGCTCG GCTGCTGCAC GTTCCCGACG TGGAACGGCT ACCCCGGCCT GTTCGCCGAC
CTGGCGACCG GCAACACGGT GATCGTCAAA CCGCACCCGG GTGCGATCCT GCCGCTTGCG
ATCACGGTTC GCATCGCCCG CGACGTGCTG CGCGAGGCAG GCTTCGATCC GAACGTCATC
ACGCTCCTCG CAACCGAACC GAACGACGGC GCCCTCGTCC AGGACCTCGC GCTGCGTCCT
GAAATCAAGC TGATCGACTT CACGGGCAGC ACGCAAAACG GCACGTGGCT CGAACGCCAT
GCCCATCAGG CCCAGGTGTA TACGGAGAAG GCCGGCGTCA ACCAGATCGT GATCGACTCG
ACCGACGACC TGAAGGCCGC GGCGAAGAAC ATCGCGTTCT CGCTGGCGCT GTACTCCGGC
CAGATGTGCA CCGCGCCGCA GAACATCTAC GTGCCGCGCG ACGGCATCCG GACCGCGGAC
GGCCACGCAA GCTTCGACGA AGTCGCGCAG GCGATCGCCG TGTCCGTGCA GAAGCTGACC
GGCGACCCGG CTCGCTCGGT CGAACTGATC GGCGCGATCC AGAACGACGG CGTGACCGCG
CGCATCGGCG ATGCCCGCAA GCTCGGCCGC GTGCTCGCCG ACAGCCAGAC GCTCCAGCAC
CCGGCGTTCG CCGACGCGCG CGTGCGCACG CCGCTGGTGC TGCAGCTCGA CGTGGCCGAC
CGCGCGAAAT TCACGCAGGA GTGGTTCGGC CCGATCTCGT TCGTGATCGC GACCGACTCG
ACCGCCCAGT CGCTCGATCT CGCCGGCGAA ATCGCCGCGG AGCATGGCGC GCTGACGCTC
TCCGTCTACA GCACCGACGA GAAGATCCTC GACGCCGCGC ACGATGCGGC GGTGCGTGGC
GGCGTCGCAC TATCGATCAA CCTGACGGGT GGTGTGTTCG TCAACCAGTC GGCCGCGTTC
TCCGACTTCC ACGGCACCGG TGCGAACCCG GCCGCAAACG CGGCGCTGGC CGACCCGGCG
TTCGTCGCCA ACCGGTTCCG CGTGGTGCAA AGCCGCGTCC ATGTTGCGCC GAAGGCAGTG
CCCGCGGAAG TCAGCCAGAC TGCATAA
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| Protein sequence | MTHALFTKHE DTLKHALAAI ESRGYWSPFA EMPSPKVYGE SANADGEAAF KAHLGNTFVL
DQPASAGTVG AEQSPYGIAL GVRYPKSTPD ELIAAAAAAQ RAWREAGPSA WIGVSLEILA
RLNRASFEIA YSVMHTTGQA FMMAFQAGGP HAQDRALEAV AYAWDELRRI PADAHWEKPQ
GKNPPLAMHK RYTIVPRGTG LVLGCCTFPT WNGYPGLFAD LATGNTVIVK PHPGAILPLA
ITVRIARDVL REAGFDPNVI TLLATEPNDG ALVQDLALRP EIKLIDFTGS TQNGTWLERH
AHQAQVYTEK AGVNQIVIDS TDDLKAAAKN IAFSLALYSG QMCTAPQNIY VPRDGIRTAD
GHASFDEVAQ AIAVSVQKLT GDPARSVELI GAIQNDGVTA RIGDARKLGR VLADSQTLQH
PAFADARVRT PLVLQLDVAD RAKFTQEWFG PISFVIATDS TAQSLDLAGE IAAEHGALTL
SVYSTDEKIL DAAHDAAVRG GVALSINLTG GVFVNQSAAF SDFHGTGANP AANAALADPA
FVANRFRVVQ SRVHVAPKAV PAEVSQTA
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