Gene Rpic12D_1403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1403 
Symbol 
ID8019048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1481335 
End bp1482771 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content66% 
IMG OID644830182 
ProductAldehyde Dehydrogenase 
Protein accessionYP_002981363 
Protein GI241663003 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0321305 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCAAC GCGACAAGCT TTTTATCAAT GGCAAGTGGG TGGCGCCGCA GGGCAAGGGC 
GTCATTGAAG TGATTCATTC GGCCACGGAA GCCGTGATGG GGACCATTCC CGAAGGCAGC
GCGGCCGATG CCGAAGCGGC CGTGGCTGCG GCGCGCGCCG CATTTGATGA CTGGGCTGCC
ACGCCCGTGG CCAAGCGCGC CGAGTACATC CAGAAGATTG CCGACGGCCT GCATGCCCGC
AGCGAAGAAC TGGCGCAGCT GATTGCCGGT GAAGTCGGCA TGCCGATCAA GTTGGCGCGT
GCCATCCAGG TGGGCGGCCC CGTCTACAAC TGGAGCAATT TCGCCAAGCT GCTCAGCACG
TTTGAATTTG AAGAGCAGGT TGGCAACTCG CTGGTGGTGC GCGAGCCCGT GGGTGTGGTG
GGCGCCATCA CGCCGTGGAA CTACCCGCTC AACCAGATCA CGCTGAAGGT TGCGCCCGCG
CTGGCGGCCG GCTGCACGGT GGTGCTCAAG CCGTCGGAAG TGGCGCCGCT CAACGCGTTC
GTGTTGGCGG AAGTCATTGA AGAAGCCGGC CTGCCGCCGG GCGTGTTCAA CCTTGTCACC
GGCTATGGCC CGGTGGTAGG CGAGGTGCTG GCAAGCGACC CGGAGGTCGA CATGGTGTCG
TTCACGGGCT CCACGCGTGC GGGCAAGCGC GTGGCGGAAC TCGCATCGCA GTCGGTCAAG
CGGGTGGCGC TGGAGCTGGG CGGCAAGTCG GCCTCGGTGA TCCTGGATGA CGCGGACCTG
GCATCGGCGG TCAAGGGCAC GCTGTCGGCG TGTTTCCTGA ACTCCGGGCA GACGTGTTCC
GCGCACACGC GCATGCTGGT CCCGCGTGCC AAATACGAAG AAGTGAAGGC GCTGGCCGCG
CAGTTTGCCG CTGCGTACGT GCCGGGCGAT CCGGCGCAGG AAAGCACGCG TCTGGGGCCG
CTGATCTCCG CCGTGCAGCG CGACCGCGTG CTGGGCTACA TCCGCAAGGG GCTGGAAGAG
GGCGCGGAAC TCATTACCGG GGGCGCCGAC ACGCCCGAAG GCCTGACTAC CGGGTACTTC
GTCAAGCCGA CGGTGCTGGG CAACGTCAAG ACCACCGACA CCGTCGCGCG CGAAGAAATC
TTCGGCCCTG TGCTGACCGT CATCTGCTAC GACGACGAGG AAGAGGCCGT CCGGATTGCC
AACGACAGCA TCTACGGCTT GGGCGGCGGT GTGTGGTCGG GCGACGAGAG CCGCGCGATT
CGCGTGGCGC GGCGCATCCG CACGGGCCAG GTCAATATCA ACGGCGGGCC GTTCAACATG
CAGGCACCGT TTGGCGGCTA CAAGCAATCC GGCAACGGGC GGGAAAACGG CAAGTACGGC
CTGGAGGAGT TCCTGGAGTA CAAGGCGCTG CAACTCAATC CCGCCAAGAC GGCCTGA
 
Protein sequence
MQQRDKLFIN GKWVAPQGKG VIEVIHSATE AVMGTIPEGS AADAEAAVAA ARAAFDDWAA 
TPVAKRAEYI QKIADGLHAR SEELAQLIAG EVGMPIKLAR AIQVGGPVYN WSNFAKLLST
FEFEEQVGNS LVVREPVGVV GAITPWNYPL NQITLKVAPA LAAGCTVVLK PSEVAPLNAF
VLAEVIEEAG LPPGVFNLVT GYGPVVGEVL ASDPEVDMVS FTGSTRAGKR VAELASQSVK
RVALELGGKS ASVILDDADL ASAVKGTLSA CFLNSGQTCS AHTRMLVPRA KYEEVKALAA
QFAAAYVPGD PAQESTRLGP LISAVQRDRV LGYIRKGLEE GAELITGGAD TPEGLTTGYF
VKPTVLGNVK TTDTVAREEI FGPVLTVICY DDEEEAVRIA NDSIYGLGGG VWSGDESRAI
RVARRIRTGQ VNINGGPFNM QAPFGGYKQS GNGRENGKYG LEEFLEYKAL QLNPAKTA