| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0808 |
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| Symbol | |
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| ID | 5746362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 901227 |
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| End bp | 902885 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641295888 |
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| Product | phenylacetic acid degradation protein paaN |
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| Protein accession | YP_001561839 |
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| Protein GI | 160896257 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR02288] phenylacetic acid degradation protein paaN |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.464517 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCCC ACGCCCTCTA CGAACGCCAC CGCCCCCTGC TCGACGACGC GCTGCAGGCC
CTGTCCCGCC GAGGCCACTG GTCGCCTTTC CCCGAGGCGC CCTCGCCCAA GGTGTATGGC
GAGACCGCAC AGGCCCAGGG CCACGCCGCC GTGCAGGCGC TGTTCGGCAA GGACTATCCG
CTGCGCCAGC CCGGTGAACG CGCCCGCGTG GCCACCGAGC AATCGCCCTA TGGCGTGGCC
CTGGACATCC GCTACCCCGA GTGCGATGCC CAGGCGCTGG TGGACGCGGC CCAGGCGGCC
GAGCCCGCAT GGCAGGCGCT GGGACCCCAG GGCCGCACCG GCGTGCTGGT GGAGGCGCTG
ACGCGCATCC ACCAGCGCAG CTTCGAGATC GCGCATGCCG TGATGCTGAC CACGGGCCAG
GGCGCGATGA TGGCCTTCCA GGCCGGCGGC CCCCATGCCC AGGACCGCGC CCTGGAAGCC
ATTGCCGTGG CCTGGAAGGC CATGGCCGAC GTGCCTGCCG AGGCCGTCTG GGAAAAGCCC
CAGGGCAAGC ATGCGCCCGC CGTGCTGCAC AAGCGCTTCG AGATCGTGGG GCGTGGCGTG
GCCCTGGTCA TCGGCTGCGC CACCTTCCCG ACCTGGAACA CCTACCCGGG CCTGTTCGCC
GCGCTGGCCA CGGGCAACCC CGTGATCGTC AAGCCCCACC CCAACGCCGT GCTGCCGGCC
GCGCTCACCG TAAGCGTGCT GCGCGATGTG CTGACCGAGC AAGGCCTGGA CCCCAACCTC
GTGACCCTGG CCGTGAGCGA CAAGCCCGAA TTGACCCAGG CCCTGGCCAC GCACGCGGCC
GTGGCCTCCA TCGACTTCAC GGGCGGCAAT GCCTTCGGCC AGTGGCTGCA GTCCAACGCG
CCGCAGGCAC GCCTGTATGC CGAGATGGCC GGCGTGAACC TGGTGGTGAT CGAGTCCACC
GATGCCTACG CAGGCATGCT GCGCAATCTG GCGCTGTCAC TGTCGCTGTA CAGCGGCCAG
ATGTGCACCA CCACGCAGAA CCTGCTGATT CCGGCCGGCG GCATAGAGAC TGACCAGGGC
CACAAGAGCT TCGAGCAGGT CGGCGCCGAT CTGGCCGCCG CCATCGACCA GTTGCTGGCC
GATCCCAAGG TGGCCTTCAC CGTGCTGGGC GCCATAGGCT CTGCGCAGAC CGTGGAGCGC
GTGGAACAGG CCGCCACCGT GGGCCGCGCC GTGCGCGCCT CGCAAAAGCT CACCCATCCC
GAGTACCCGC AGGCCGAGGT GCGCACGCCC GCGCTGCGCG CGCTGGACGT GGCGGACGCC
GCCATCTACG AGCGCGAATG CTTCGGCCCG GTCTCCTACC TGGTGGCCGT GCCCTCGGCC
CAGGCCGCGC GCGAGCTGGC CGAGCGCAGC GTGCGTGCGC ATGGCGCGAT GACCCTGGGC
CTGTACTCCA CGGATGCGGC CTTTGTCGAT GCCGTGGCGG CCTCGGCGCT GCGCTCGCGC
GTGGCCCTGT CCATCAACCT CACGCAGGGC GTGATGGTCA ACCAGTCGGC AGGCTTCTCG
GACTTCCACG CCACGGGCGG CAATCCCGCG GCCAATGCCA GCTACACCAC GCTGGCCTTC
GTGGCCGACC GCTTCGTGGT CGTGCAGCGC AGGTGGTAA
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| Protein sequence | MPAHALYERH RPLLDDALQA LSRRGHWSPF PEAPSPKVYG ETAQAQGHAA VQALFGKDYP
LRQPGERARV ATEQSPYGVA LDIRYPECDA QALVDAAQAA EPAWQALGPQ GRTGVLVEAL
TRIHQRSFEI AHAVMLTTGQ GAMMAFQAGG PHAQDRALEA IAVAWKAMAD VPAEAVWEKP
QGKHAPAVLH KRFEIVGRGV ALVIGCATFP TWNTYPGLFA ALATGNPVIV KPHPNAVLPA
ALTVSVLRDV LTEQGLDPNL VTLAVSDKPE LTQALATHAA VASIDFTGGN AFGQWLQSNA
PQARLYAEMA GVNLVVIEST DAYAGMLRNL ALSLSLYSGQ MCTTTQNLLI PAGGIETDQG
HKSFEQVGAD LAAAIDQLLA DPKVAFTVLG AIGSAQTVER VEQAATVGRA VRASQKLTHP
EYPQAEVRTP ALRALDVADA AIYERECFGP VSYLVAVPSA QAARELAERS VRAHGAMTLG
LYSTDAAFVD AVAASALRSR VALSINLTQG VMVNQSAGFS DFHATGGNPA ANASYTTLAF
VADRFVVVQR RW
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