| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3446 |
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| Symbol | |
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| ID | 4243390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 5269160 |
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| End bp | 5272141 |
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| Gene Length | 2982 bp |
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| Protein Length | 993 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638108423 |
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| Product | L-proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase |
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| Protein accession | YP_723012 |
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| Protein GI | 113476951 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0506] Proline dehydrogenase
[COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01237] delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative
[TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTGAAC AAATATCCCA TACTAACTAC GAAACTAAAA CTCAAGAAAT AGCTAAACAA
CTCTTGAAAG CAACTCAGGA AAAAAATCGT TCTTTCTTGG CTCAATTGCA AAATCAAATG
CGGTGGGATG ATAAGCTCCT TGACTGGGCA ATGGCAAGTC CTGGTTTGCG AGTCCAACTA
TTTCGTTTTA TTGACTGTTT ACCAGCATTA CGGAGTAAAC CAGAAATAGC TGCTCACCTC
CAAGAATATC TGACTACTCA AGAAGTCGAA CTTCCAGAAA CTCTCAAAAA ACTACTCAAT
TTTGCTAACC CAGACTCTGT TCCTGGTCAA CTTGCAGCGA CTACTGTTGC ACCTGCAGTG
GAAACTCTCG CTCATAAATA TATTGCTGGG GAAAATGTTA AGCAAATCAT CAAAACCCTA
GAAAAACTAC GGAAAGATAA AATGTGCTTT ACTGTCGACC TCCTTGGAGA AGCAGTCATC
ACTGAAACTG AAGCACAGTT ATATTTAGAC CGTTATCTTG AACTGATGAC TCAACTTTCC
CAAGCTGCTA ATAGCTGGTC ATCAATTCCC CAAATAGATG AAGCAGAAGG GGAAAAACTA
CCACGAGTAC AAGTATCGGT AAAACTTACA GCATTTTATT CTCAGTTTGA TCCTCTTGAT
GTTAAAGGTA GTCAGGAAAG AGTGAGTGAT CATGTACGCA CTCTACTCAG ACATGCTCAA
AAACTGGGTG TAGCAGTTCA CTTTGACATG GAACAATATA CTTATAAAGA CCTGACTATT
GATATTCTTA AAGAATTGTT GATGGAAGAA GAATTTCGCA ACCGTAATGA TATCGGTGTG
ACAATTCAAG CATATTTGCG GGATAGTGAA AAAGATCTGC AAGGCATTAT TGAATGGGCA
AAAATTAGAG GTCGTCCCGT TACTGTTCGA CTTGTAAAAG GAGCCTATTG GGATCAGGAA
ACTATCAAGG CTTTACAACA TGACTGGCCC CAACCAGTAT TTAATGATAA ACCTGAAACT
GATGCCAACT TTGAAAAGCT GACTTATATG ATGCTAGAAA ATCATGAATA TATTTACTCA
GCTATTGGTA GTCATAATGT TCGTTCTCAA GCGAGAGCGA TCGCTATTGC TGAAACTCTA
AAAGTTCCTC GGCGGTGCTT TGAGATGCAG GTACTCTATG GTATGGGTGA CAAAATAGCT
ACAATATTAG CAGAAAAGGG TTATCGCGTC CGAGTTTATT GCCCCTACGG TGATCTTTTA
CCAGGAATGG CATATTTAAT TCGTCGCCTC CTAGAAAATA CTGCTAACAG TTCATTTCTC
AAACAAAGTT TAGAAAACCG GCCTTTAGAA GAATTATTGG CAGCACCAAG TATTAATGGT
AAAACTACAA TTCACGATGT GGTCAAACCA GTTTTCCCTA ATGCTGCCGA TAGCGACTAC
GCTAATTTCC AACAACGGCA ACAAGCTTTG AATACTATTG GTCAAATACG ACTAGAGTTA
GGAAAAACCT ATCTGCCAAT TATTAATGGT GAATACACAA ACACAGCACA AATAGTTGAT
TCACTGAACC CATCAAATTC TAAGGAGGTT GTTGGCAAAA TTGGTTTAAT ATCGGTAGAA
CAAGCAGAGC AGGCAATTCA AGCAGCCAAA GCAGCGTTTC CAAGTTGGAA GAAAACACCA
GTTCGAGAAC GGACAAGGAT ATTGCGCAAA GCTGCTGACT TAATGGAAAA ACGTCGTCAT
GAGTTGGCAG CATGGATGGT TTTAGAGGTT GGTAAACCTC TTAACCAAGG TAATGCAGAA
GTTTCTGAGG CGATAGATTT TTGTCGTTAT TATGCTGATG AGATGGAACG GTTAGAGCAG
GGCTATAATT ATGATGTCGC TGGAGAAACT GACCGTTATT ATTATCAACC TCGTGGTATT
TCTTTAGTAA TTTCTCCTTG GAATTTTCCT CTGGCTATTC CTACTGGAAT GACTGTTTCG
TCTCTGGTGA CAGGTAATTG TACTTTGTTG AAGCCAGCAG CAGTATCATC GGTTATTGCT
TCTAAAATTT CTGAGATTTT GCTAGAAGCT GGTTTTCCTA AGGGGGTATT TCAATTTGTT
CCGGGAAATG GTTCCACTGT GGGTGATTTT ATGGTGAAGC ACCCAAGTGT TAATAGTATT
ACTTTTACTG GTTCGATGGA AGTGGGTTGT CACATTTATG CTCAAGCTGC AGTTTTGCAA
CCAAGGCAAA AACATTTGAA GCGAGTTATT GCTGAAATGG GTGGTAAAAA TGCGATTATT
GTAGATGAAA GTGCAGATCT TGACCAAGCA GTTGCTGGTG TTGTTTATTC TGCTTTTGGA
TATAGTGGAC AGAAATGTTC GGCTTGTTCG CGGGTTGTAG TATTGGCAAC AATTTATGAT
AGTTTTGTGA ATCGTTTGGT GGAGGCTACG CGATCGCTCA ATATAGGGGA TGCGGAGAAG
CCAAGTACAC AAGTTGGTCC GGTAATTGAT GAGAAAGCGC AAAAGCGGAT TCAGGAATAT
ATTGTGAAAG GTAAGCAGGA AGCAGAAGTT GCTATTGAGA TGAGTGCGCC GAAGGATGGT
TATTTTGTTG GTCCTGTGAT ATTTAAGGAT GTGTCGCCAA GTGCAACTAT TGCTCAGGAA
GAAATATTTG GTCCTGTGTT GGCAGTAATG AAGGCGGATA ATTTTACTCA AGCTTTGGAA
ATTGCTAATG GGACTAATTT TGCTTTAACT GGGGGGTTAT ATTCCCGTAC TCCTTCTCAT
ATTGAACAAG CAAAAGCAGA GTTTGAAGTG GGGAATTTAT ATATTAATCG TGGAATTACT
GGAGCGATCG TTTCTCGACA ACCATTTGGT GGGTTTAAGT TGTCTGGGGT GGGTTCAAAG
GCGGGAGGAC CGGATTATTT ACTGCAGTTT TTGGAACCGC GCACGATAAC TGAGAATATA
CAAAGGCAAG GTTTTGCACC TATAGAGGGT GTGGATAATT GA
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| Protein sequence | MVEQISHTNY ETKTQEIAKQ LLKATQEKNR SFLAQLQNQM RWDDKLLDWA MASPGLRVQL
FRFIDCLPAL RSKPEIAAHL QEYLTTQEVE LPETLKKLLN FANPDSVPGQ LAATTVAPAV
ETLAHKYIAG ENVKQIIKTL EKLRKDKMCF TVDLLGEAVI TETEAQLYLD RYLELMTQLS
QAANSWSSIP QIDEAEGEKL PRVQVSVKLT AFYSQFDPLD VKGSQERVSD HVRTLLRHAQ
KLGVAVHFDM EQYTYKDLTI DILKELLMEE EFRNRNDIGV TIQAYLRDSE KDLQGIIEWA
KIRGRPVTVR LVKGAYWDQE TIKALQHDWP QPVFNDKPET DANFEKLTYM MLENHEYIYS
AIGSHNVRSQ ARAIAIAETL KVPRRCFEMQ VLYGMGDKIA TILAEKGYRV RVYCPYGDLL
PGMAYLIRRL LENTANSSFL KQSLENRPLE ELLAAPSING KTTIHDVVKP VFPNAADSDY
ANFQQRQQAL NTIGQIRLEL GKTYLPIING EYTNTAQIVD SLNPSNSKEV VGKIGLISVE
QAEQAIQAAK AAFPSWKKTP VRERTRILRK AADLMEKRRH ELAAWMVLEV GKPLNQGNAE
VSEAIDFCRY YADEMERLEQ GYNYDVAGET DRYYYQPRGI SLVISPWNFP LAIPTGMTVS
SLVTGNCTLL KPAAVSSVIA SKISEILLEA GFPKGVFQFV PGNGSTVGDF MVKHPSVNSI
TFTGSMEVGC HIYAQAAVLQ PRQKHLKRVI AEMGGKNAII VDESADLDQA VAGVVYSAFG
YSGQKCSACS RVVVLATIYD SFVNRLVEAT RSLNIGDAEK PSTQVGPVID EKAQKRIQEY
IVKGKQEAEV AIEMSAPKDG YFVGPVIFKD VSPSATIAQE EIFGPVLAVM KADNFTQALE
IANGTNFALT GGLYSRTPSH IEQAKAEFEV GNLYINRGIT GAIVSRQPFG GFKLSGVGSK
AGGPDYLLQF LEPRTITENI QRQGFAPIEG VDN
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