Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_0543 |
Symbol | |
ID | 4450603 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | - |
Start bp | 603251 |
End bp | 604957 |
Gene Length | 1707 bp |
Protein Length | 568 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639692561 |
Product | phenylacetic acid degradation protein paaN |
Protein accession | YP_834190 |
Protein GI | 116688567 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | [TIGR02288] phenylacetic acid degradation protein paaN |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0023429 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCACG CACTGTTCAC GAAGCACGAA GACACGCTGA AACACGCACT CGCCGCCATC GAGAGCCGCG GGTACTGGAG CCCGTTCGCC GAAATGCCGA GCCCCAAAGT GTACGGGGAA AGCGCCAGCG CGGACGGTGA GGCCGCGTTC AAGTCACACC TCGACAAGAC CTTCGTGCTC GACCAGCCGG CGACCGGTGA AACGGTCGGC GCCGAGCGCT CGCCGTACGG CATCGCGCTG GGCGTCCGGT ACCCGAAATC GGCGCCCGAC GCACTGATCG CTGCTGCCGC CGCCGCGCAA CGCACGTGGC GCGAAGCCGG CCCGAGCGCA TGGGTCGGCG TCAGCCTCGA AATCCTCGCG CGCCTGAACC GTGCAAGCTT CGAAATTGCC TACAGCGTGA TGCACACCAC CGGGCAAGCC TTCATGATGG CGTTTCAGGC CGGCGGCCCG CACGCGCAGG ACCGCGCCCT CGAGGCGGTC GCCTATGCGT GGGACGAACT GCGCCGCATC CCGGCCGATG CGCACTGGGA AAAACCGCAA GGCAAGAACC CGCCGCTCGC GATGCACAAG CGCTACACGA TCGTGCCGCG CGGCACGGGC CTCGTGCTCG GCTGCTGCAC GTTCCCGACC TGGAACGGCT ACCCGGGCCT GTTCGCCGAC CTGGCAACCG GTAATACCGT GATCGTCAAA CCGCACCCCG GCGCGATCCT GCCGCTCGCC ATCACGGTGC GGATCGCCCG CGACGTGCTG CGCGAAGCCG GGTTCGATCC GAACGTCGTC ACGCTCCTCG CGACCGAACC CAACGACGGC GCCCTCGTCC AGGACCTCGC GCTGCGCCCC GAGATCAAGC TGATCGACTT CACCGGCAGC ACGCAGAACG GCACGTGGCT CGAACGCCAT GCCCACCAGG CACAGGTCTA TACCGAGAAA GCCGGCGTCA ACCAGATCGT GATCGACTCG ACCGACGACC TGAAGGCCGC CGCCAAGAAC ATCGCGTTCT CGCTGGCGCT GTACTCCGGC CAGATGTGCA CGGCACCGCA GAACATCTAC GTGCCACGCG GCGGCATCCG GACGACCGAC GGCCATGCGA GCTTCGACGA AGTCGCGCAG GCGATCGCGG TTGCCGTGCA AAAACTCACC GGCGATCCAG CTCGCTCGGT CGAACTGATC GGTGCGATCC AGAATGAAGG CGTGACTGCG CGCATCGACG ACGCGCGCAA GCTCGGCCGC GTACTCGCGG ACAGCGTGAC GCTCCAGCAT CCCGCCTTCC CCGATGCGCG CGTGCGTACG CCGCTCGTGC TGCAACTCGA CGTGGCCGAC CGAGAGAAAT TCACCCAGGA GTGGTTCGGC CCGATCTCGT TCGTGATCGC GACCGACTCG ACCGCGCAGT CGCTCGATCT CGCCGGTGAA ATCGCAGCCG AGCATGGCGC ACTGACCCTC TCCGTCTACA GCACGGACGA CGCAATCGTC GACGCCGCAC ACGACGCGGC AGTGCGTGGC GGCGTCGCGC TGTCGATCAA CCTCACGGGC GGCGTATTCG TCAACCAGTC GGCCGCGTTC TCCGACTTCC ACGGCACGGG CGCGAACCCG GCAGCCAACG CAGCGCTGGC CGACCCGGCA TTCGTCGCCA ACCGGTTCCG CGTGGTGCAA AGCCGCGTCC ATGTTGCCCC GAAGGCGGCA CCCGCGGAAG CTGGCCAGAC GGCATAA
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Protein sequence | MTHALFTKHE DTLKHALAAI ESRGYWSPFA EMPSPKVYGE SASADGEAAF KSHLDKTFVL DQPATGETVG AERSPYGIAL GVRYPKSAPD ALIAAAAAAQ RTWREAGPSA WVGVSLEILA RLNRASFEIA YSVMHTTGQA FMMAFQAGGP HAQDRALEAV AYAWDELRRI PADAHWEKPQ GKNPPLAMHK RYTIVPRGTG LVLGCCTFPT WNGYPGLFAD LATGNTVIVK PHPGAILPLA ITVRIARDVL REAGFDPNVV TLLATEPNDG ALVQDLALRP EIKLIDFTGS TQNGTWLERH AHQAQVYTEK AGVNQIVIDS TDDLKAAAKN IAFSLALYSG QMCTAPQNIY VPRGGIRTTD GHASFDEVAQ AIAVAVQKLT GDPARSVELI GAIQNEGVTA RIDDARKLGR VLADSVTLQH PAFPDARVRT PLVLQLDVAD REKFTQEWFG PISFVIATDS TAQSLDLAGE IAAEHGALTL SVYSTDDAIV DAAHDAAVRG GVALSINLTG GVFVNQSAAF SDFHGTGANP AANAALADPA FVANRFRVVQ SRVHVAPKAA PAEAGQTA
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