Gene Snas_6112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6112 
Symbol 
ID8887333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6473427 
End bp6475154 
Gene Length1728 bp 
Protein Length575 aa 
Translation table11 
GC content70% 
IMG OID 
Productphenylacetic acid degradation protein paaN 
Protein accessionYP_003514829 
Protein GI291303551 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.771737 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCATC CACTGCTCGC CAAGCACCGA GACACCCTCG ACAACGCGCT GGCCGCGATC 
GCGGACCGCG GCTACTTCTC GATCTATCCC GAGTCGCCGA GTCCCCGCGT CTACGGCGAA
ACCGCCGCCG ATGACGGCAA GGCGGCCTTC ACGGCGCTGC TGGGGCAGCG TTTCGACATC
GACCAGCCTG GCGTCCGCGA CCACGTCGCG ACCGAGGACA GCCCCTTCGG GATCGACCTG
GGGGTCGAGT ACCCGCGCAC CGAGCCGGGC GCGCTCATCG ACGCCGCGAC CGCCGCCTGG
CCGAGCTGGC GCGACGCCGA TCCGGCCACC CGCGCCGGGG TCTGCATCGA GATCCTGGAG
CGCATCCACA AAGACGTGTT CACCATGGCC AACGCGGTGC ACGCCACCAC CGGCCAGCCG
TTCGTGATGG CCTTCCAGGC CGGTGGCCCG CACGCCCTGG ACCGGGGCCT GGAGGGCGTC
GCCTACGGCT ACTTCGAGCA GACCCGCACC CCCGCCACCT CCTACTGGGA GAAACCGGCC
GGCAAGGGCC AGGTGCTGGC GATGGAGAAG ACCTTTACGG TCGTGCCGCG CGGCGTCGCG
CTCGTCGTCG CCTGCGCCAC CTTCCCGACC TGGAACTCCT ACCCGGGGCT GTTCGCGTCG
CTGGTCACCG GCAACCCGGT GATCGTCAAG CCGCACCCGA ACGCGGTGCT GCCGCTGGCG
CTGACCGTGC GGCACGCCCG CGAGGTGCTG GCCGAGGCCG GGTTCGACCC GAACCTGGTG
ACGCTGGCCG CCGAGCGGCC CGACGACCGG ATCGCCGCGA GCCTCGCCAC CGACCCGCGA
GTGCGCATTG TGGACTTCAC CGGTTCCACG TCCTTCGGGA CCTGGCTGGA GGACAACGCC
CGCCACGCGG CCGTCTACAC CGAGAAGGCC GGGGTCAACA CCGTCGTCAT CGACTCGACC
GAGGACTTCA AGGGGCTGTG CCGCAACCTG GCCTTCACCC TGTGCCTCTA CAGCGGACAG
ATGTGCACGA CGACGCAGGC GATCTTCCTG CCGTCCGACG GCATCGACAC CCCCGAGGGC
CACCTGTCCG CCGACGAGGT GATCGCGGGA ATCGCCGGCG CGGTGGAGAA GCTCACCGGC
GACGACGCCA AGGCCGTCGA GCTGATCGGC GCCGTCTCGG CCGGGGTCGC CGACCGGGTG
GGCGACGCGG CCGGACTCGG CGAGGTCGTG CTGGCCTCCC GCGCCATCAC GCATCCGTCC
TATCCGGACG CCCGGGTGCG GACTCCGCTG CTGCTCAAGG TGACCGCCGA GGCCCGCAAG
TCCTACGGCA CCGAGTGCTT CGGCCCGATC GCCTTCTTCG TCACCACCTC GGGCACCGCC
GAGAGCCTGA ACCTGGTGCG CGAGGTCGTC ACCGAGCAGG GCGCGCTGAC CATGGGTGTC
TACTCCACCG ACGACGCGGT GCTGGACGCC ACCGAGCAGG TCTCGCGCGA CGTAGCGGTC
CACCTGTCGC GCAACCTGTA CGGCGGCGTG TTCGTCAACC AGACCGCCGC GTTCTCGGAC
TTCCACGCCT CGGGAGGCAA CCCGGCCGCC AACGCCAGCC TCGTCGACGG CGCCTATGTG
TCCGGACGGT TCCGGGTGAT CGAGTCGCGG CGGCACGTGC CGCCGCGCGC CAACTCGTTA
TCCCGCACAC GGGAAAGAAC GATTTCACCG CTGGTTGTGC TGGTGTAG
 
Protein sequence
MTHPLLAKHR DTLDNALAAI ADRGYFSIYP ESPSPRVYGE TAADDGKAAF TALLGQRFDI 
DQPGVRDHVA TEDSPFGIDL GVEYPRTEPG ALIDAATAAW PSWRDADPAT RAGVCIEILE
RIHKDVFTMA NAVHATTGQP FVMAFQAGGP HALDRGLEGV AYGYFEQTRT PATSYWEKPA
GKGQVLAMEK TFTVVPRGVA LVVACATFPT WNSYPGLFAS LVTGNPVIVK PHPNAVLPLA
LTVRHAREVL AEAGFDPNLV TLAAERPDDR IAASLATDPR VRIVDFTGST SFGTWLEDNA
RHAAVYTEKA GVNTVVIDST EDFKGLCRNL AFTLCLYSGQ MCTTTQAIFL PSDGIDTPEG
HLSADEVIAG IAGAVEKLTG DDAKAVELIG AVSAGVADRV GDAAGLGEVV LASRAITHPS
YPDARVRTPL LLKVTAEARK SYGTECFGPI AFFVTTSGTA ESLNLVREVV TEQGALTMGV
YSTDDAVLDA TEQVSRDVAV HLSRNLYGGV FVNQTAAFSD FHASGGNPAA NASLVDGAYV
SGRFRVIESR RHVPPRANSL SRTRERTISP LVVLV