| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2450 |
|---|
| Symbol | |
|---|
| ID | 4014872 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 2552536 |
|---|
| End bp | 2554026 |
|---|
| Gene Length | 1491 bp |
|---|
| Protein Length | 496 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637942115 |
|---|
| Product | betaine-aldehyde dehydrogenase |
|---|
| Protein accession | YP_549267 |
|---|
| Protein GI | 91788315 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.389244 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCCATTAC CCGGCCTTTT CCCGGCCATT CCCCAGCCTT TCAAGGCCGA CACGACCATG
CCCACGACCG CCTATCCAGC CCACTACATC AACGGCCAGT GGGTCACCGC CAGATCTTCG
GAAACCCTGC CGGTTTACGA CTCCAGCACC GAAGCCCTGA TGGCGACGGT GCCCAGCGGC
ACCGCTGCTG AAGCTGAAGC TGCCGTGTTG GCGGCACGTG CCGCTTTTGA CAGCTGGTCG
ACGTTGCCGG TGGAAACCCG CGCGGCTTAT CTCGACAAAG TGGCGGCCGG CGTCAAGGCG
CGCACGGAAG ATCTGGCGCT CGCCATTGCC CGCGAAGTGG GCATGCCGCT GAAAATGGCG
CGGGCTGTGC AGGTGGGCGG CCCGATCTGG CATTGGGGCA ACTTTGCCAA AGTCGCGCGC
AGCTTTGAGT GGGAGAAGAA GGTCGGAAAC TCCCTGGTCG TTCGCGAAGC AGTGGGTGTC
GTGGGCTGCA TCACGCCATG GAATTTCCCG CTCAGCCAGA TCACGCTCAA AATTGCCCCG
GCCATGGCGG CAGGTTGCAC CGTGGTGCTC AAACCCAGCG AAATTGCACC TGTCAATGCC
ATGATCCTGG CCGAGATCAT TCACAAAGCC GGCCTGCCGC CCGGTGTTTT CAATCTGATC
AACGGGATGG GGCCGGTAGT GGGTGAGGTG CTGGCCACAC ATTCCGAAAT CGACATGGTG
AGCTTCACCG GCTCGACCCG CGCCGGCAAG CGGGTGAGTG AGCTGGCCAG CCAGACTGTC
AAACGCGTGG CGCTGGAGCT GGGTGGCAAG TCGGCGAGCG TCATACTGGA CGATGCCAAT
CTGGAAGCCG CCGTTAAAGG CACGGTGTCG GCCTGCATGC TCAACAGCGG CCAGACCTGC
TCGGCTCATA CCCGCATGCT GGTGCCCGTC CATCGTTACG ATGAAGTGAA GGCGCTGGCT
CAGGCGGCCA TCGCCAGGTT CAACATTGGC CCCAGCCTGG ACGAAACCAG CAAACTGGGC
CCCTTGGTCA GTGCGGCGCA ACGCGACCGC GTACTGGGTT TCATACGTAC CGGCATCGAA
GAAGGTGCCG AGGTGATTGC GGGAGGCGCT GCGGCACCTG CGCTGGACAA GGGCTATTTT
GTGCAGCCCA CCATTTTGGG CATCAAGGCG ACTGATACCC TGGCGCAGGA AGAGATTTTT
GGCCCTGTCC TGGTTGTCAT TCCTTACAAA GATGAAGACG AGGCCGTGGC GATAGTCAAC
AGCACCATCT ACGGCTTGGG CGGCGCCGTC TGGAGCGGCT CTGACGAGCA TGCCATGAAA
GTGGCCCGCC GTATTCGCAC AGGCCAGGTG GATATCAATG GAGGTCCCTT CAATGGCAGT
GCGCCTTTCG GGGGTTACAA GCAGTCAGGC AATGGGCGGG AGAACGGCGT CTACGGGTTT
GAGGAGTTTC TGGAATTCAA GGCGCTGCAA TTCAAACCCA GCGCAAGCTG A
|
|---|
| Protein sequence | MPLPGLFPAI PQPFKADTTM PTTAYPAHYI NGQWVTARSS ETLPVYDSST EALMATVPSG
TAAEAEAAVL AARAAFDSWS TLPVETRAAY LDKVAAGVKA RTEDLALAIA REVGMPLKMA
RAVQVGGPIW HWGNFAKVAR SFEWEKKVGN SLVVREAVGV VGCITPWNFP LSQITLKIAP
AMAAGCTVVL KPSEIAPVNA MILAEIIHKA GLPPGVFNLI NGMGPVVGEV LATHSEIDMV
SFTGSTRAGK RVSELASQTV KRVALELGGK SASVILDDAN LEAAVKGTVS ACMLNSGQTC
SAHTRMLVPV HRYDEVKALA QAAIARFNIG PSLDETSKLG PLVSAAQRDR VLGFIRTGIE
EGAEVIAGGA AAPALDKGYF VQPTILGIKA TDTLAQEEIF GPVLVVIPYK DEDEAVAIVN
STIYGLGGAV WSGSDEHAMK VARRIRTGQV DINGGPFNGS APFGGYKQSG NGRENGVYGF
EEFLEFKALQ FKPSAS
|
|---|
| |