Gene Meso_1325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_1325 
Symbol 
ID4181598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp1415470 
End bp1419084 
Gene Length3615 bp 
Protein Length1204 aa 
Translation table11 
GC content66% 
IMG OID638067213 
Productbifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 
Protein accessionYP_673886 
Protein GI110633678 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0506] Proline dehydrogenase
[COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase 
TIGRFAM ID[TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGCAC TCGATGCCCT TCGCGACGAG ATCCGGAAAC ATTACCTTGC CGATGAAGAC 
GTTCTGCTCC GGCGGCTGAT CGAATCCGCC GACCTCTCCC CCGCCCGTCG TGAGGCGATT
TCGGCAAAGG CGGCGGAACT GGTGCGCGCG GTGCGGGCAG GCTCCACCCG GCATTTGATG
GAATCCTTCC TGGCGGAGTA CGGCCTATCG ACCAGCGAGG GCGTAGCGCT GATGTGCCTG
GCGGAGGCGC TGCTGCGCGT CCCTGATGCG GAGACCATGG ATGACCTCAT CGCCGACAAG
ATCGCGCCGC ACGATTGGTC GGCGCATTCG GGCGAATCCG CCTCCATCTT CGTGAACGCC
TCCACCTGGG CGCTGATGCT GACGGGCCGT GTGCTGGACG ATGAAGGCAA CGGCATCGAG
GCGACGCTGC GCGGCATGGT CCGCCGCCTG GGCGAGCCGG TGATCCGCGC CGCGGTGGCC
GCCGCCATGC GCGAAATGGG CGAGCAGTTC GTGCTTGGCC GCACCATCGC GGAGGCGATC
AAGCGCGGCC GTGCGATGAC CGCCAAGGGC TATACCTATT CCTATGACAT GCTGGGCGAG
GCAGCCCGCA CGGAAGCCGA TGCCCGGCGC TATTTCCAGG CTTACCGGAA TGCGATCGCC
GCGCTTAAGG GAGAGGCGAA GAGCGAGGAT ATCCGCGCCA ATCCAGGCAT TTCCGTAAAG
CTGTCGGCAA TCCACCCCCG TTACGAGGCC ACGCAGCGCG AACGCGTGAT GCCGGTCGTG
ACCGAACGCC TGCTTCTGCT TGCGCAGGAC GCCAGGGCCG CGCGCATGGG CCTCAACATC
GACGCGGAGG AAGCGGACCG GCTCGACCTC TCGCTTGACG TGATCGAGCG CGTGCTGGCG
GACCCCTCGC TTGAAGGTTG GGACGGCTTC GGCATTGTCG TCCAGGCCTA TGGGCGGCGT
GCCCCCTTTG TCATCGACTG GCTTTACGCG CTTGCCGAAA GGCTTGACCG CCGGATCATG
GTCCGTCTCG TGAAGGGAGC CTATTGGGAC ACGGAGATCA AGCGTGCGCA GGTCATGGGC
CTGTCGAGCT ATCCCGTCTT CACGCGCAAG GTGAACACGG ACATCTCCTA TATTGCCTGC
GCGCGGAAGC TCCTTTCGTT GACCGATCGC ATCTACCCGC AATTCGCCAC GCACAACGCG
CACACGGTCG CCGCCATCCT GGCCATGGCC GAGAACAGGA ATGCTTTCGA ATTCCAGCGT
CTGCACGGGA TGGGCGAGGC CCTGCACGAT ATCATTAAGC GCCGCGAAGG AACGCGCTGC
CGCATCTATG CGCCCGTGGG CGCGCATGAG GATTTGCTTG CCTATCTGGT CCGCCGCCTT
CTCGAAAACG GCGCCAATTC TTCCTTCGTC CACCAGATCG TGGATGAAGA GGTGAGCGCG
GAGGAGATCG CGCGTGATCC CTTCGCCCTG GCCGAAGCCG CCGGCTCTGC TCCGAATCCG
GCCATTCCCC TGCCGGCACT CATCTTCGGT CGGCAGCGGA TTAACGCGAA GGGGTGGGAC
ATCACCGACG AGACGGCGCT TCGTGAGATC GAGACGGCGC GGCGGCCTTT CCAGGCGCCG
CATCGCTGGG AAGGGCGGCC GATCACGCGC GCGAGAGGGC AGGGCGAGGC GCGCATCATC
GTCAATCCCG CCCGGACCAG CGAAATCGTC GGCACGGTTT TTGATGCTTC GCCCGGGCAG
GTGAGCGAAT CGGTCCGCCT TGCGGTTGCC GCCCAGCCCG GCTGGGCCGC CACGCCGGTT
ACCGAGAGGG CGGAGATCCT GCGGCGCATC GCCGATCTCT ACGAAGCCCA TGCCGGCGAA
TTCTTCGCCC TTTGCGCGCG AGAGGCGGGC AAGACATTGC CTGACGGCAT TGCCGAACTG
CGCGAGGCCG TGGATTTCCT GCGCTATTAT GCAAACGAGG CGGCACAGGC GGAGGAGGGG
ACCGGGGCGC GTGGCGTCAT CGCCTGCATC TCGCCCTGGA ACTTCCCGCT CGCCATCTTC
ACGGGCCAGA TCGCGGCGGC GCTTGTGACG GGCAATGCGG TGGTGGCCAA GCCCGCGGAG
CAGACCTGCC TCATAGCAAC GCGTGCGGTG GCGCTGATGC ACGAAGCGGG CGTCCCCGAA
GATGTGCTGC ATCTCCTGCC CGGCGACGGC CCCTCCGTCG GCGCGCCGCT CACGGCGGAC
CCGCGCATCG CCGGCGTCTG TTTCACGGGC TCGACCGAGG TTGCGCGGGC GATCGAGCGC
CAGCTTGCCA AGACCGCCGC GCCTGACGCG ATGCTGATTG CCGAAACCGG CGGCCTCAAC
GCCATGATCG TCGATTCCAC GGCCCTGCCG GAACAGGCCG TGCGCGACAT CCTCGCCTCT
GCCTTCCAGA GCGCCGGCCA GCGCTGTTCC GCCTTGCGAA TCCTTTACAT CCAGAAGGAT
GTGGAGGCCC GTGTGACCGC GATGCTTCGA GGAGCCATGC AGGCGCTCAC CGTAGGTGAT
CCTTGGCAGG TTCCCACCGA TGTGGGCCCC GTCATCGATG ACGAGGCCCT TTCCGGGATT
TCCGGCTATT GCGAGGAGAT GGAGCGCAAG GGCCGTCTCC TCGCCCGGAT CGAGCGGCCC
GAGGGGGGGC GCTTCGTGGC GCCCGCAGCC TTCCAAGTCT CGGGCATCGA GGAAATGGAG
CGTGAGGTTT TCGGCCCCGT CCTGCATGTT GCCACCTTCG AGGCGGAGGA TCTGGGACAC
GTGATTTCCG CAGTCAACGC GAAGGGTTAC GGCCTGACTT TCGGGCTTCA CACGCGAATT
GACGCGCGCG TGCAGGAGGT CGTGGACGGG ATCCATGCCG GCAACATCTA TGTTAACCGC
AACCAGATCG GAGCGGTCGT GGGATCGCAG CCTTTCGGCG GAGAAGGGCT TTCGGGCACC
GGGCCAAAGG CGGGCGGTCC GCATTATCTA CGGCGTTTCC GCCGCGGCAA GGCCGGGCCG
GACCTCGCGC CAGCCGATGC TCCGGCGATC GCCGCCGAAG AGCTGGTGCG GGCAATGCCC
GATGCGCAAA AGAGCGGCTG GGCGGATCGC ACAGATCGCA TCGTCGCGCT GCGGCGCGCG
CTGCGCGGGC GCTGGGCGGA CGTGCTTGCC TCCGCGGCCG CCCTCGATCT GGGTCCTGTC
GACCTGCCCG GGCCTACGGG CGAGGCCAAC ACCCTGCAGC TTGCCCCACG CGGCCGCGTG
CTTTGCCTTG GCGCCGATGC CGATGCTCTT GCCGCGCAGG TGATCCAGGC GCTTGCCGCG
GGCAATGCGG TGCTTGCCGT CGCAAAAGAT GCGCCGGCCA TCTTGCAGCC CCTGACCAGG
GCCGGATTTC CGCTCGCCGC TTTCCATGGA AATGTCGCGC CGCAGACACT GGAAACACTC
GCGCTCGATC TTGTTGCGGC TACGGGGGAG CGGCAGTGGC TCACGGCAGT GAGGACCGCG
CTTTCCGCGC GGGAAGGCCG GATCGTGCCG CTCGTGACGG AGCTTGTCTA CCCCGCGGCC
TATGCCCATG AGCGATCGGT CTGCGTCGAC ACGACGGCGG CGGGTGGAAA TGCAAGCCTG
CTTGCAGCGG CTTAA
 
Protein sequence
MPALDALRDE IRKHYLADED VLLRRLIESA DLSPARREAI SAKAAELVRA VRAGSTRHLM 
ESFLAEYGLS TSEGVALMCL AEALLRVPDA ETMDDLIADK IAPHDWSAHS GESASIFVNA
STWALMLTGR VLDDEGNGIE ATLRGMVRRL GEPVIRAAVA AAMREMGEQF VLGRTIAEAI
KRGRAMTAKG YTYSYDMLGE AARTEADARR YFQAYRNAIA ALKGEAKSED IRANPGISVK
LSAIHPRYEA TQRERVMPVV TERLLLLAQD ARAARMGLNI DAEEADRLDL SLDVIERVLA
DPSLEGWDGF GIVVQAYGRR APFVIDWLYA LAERLDRRIM VRLVKGAYWD TEIKRAQVMG
LSSYPVFTRK VNTDISYIAC ARKLLSLTDR IYPQFATHNA HTVAAILAMA ENRNAFEFQR
LHGMGEALHD IIKRREGTRC RIYAPVGAHE DLLAYLVRRL LENGANSSFV HQIVDEEVSA
EEIARDPFAL AEAAGSAPNP AIPLPALIFG RQRINAKGWD ITDETALREI ETARRPFQAP
HRWEGRPITR ARGQGEARII VNPARTSEIV GTVFDASPGQ VSESVRLAVA AQPGWAATPV
TERAEILRRI ADLYEAHAGE FFALCAREAG KTLPDGIAEL REAVDFLRYY ANEAAQAEEG
TGARGVIACI SPWNFPLAIF TGQIAAALVT GNAVVAKPAE QTCLIATRAV ALMHEAGVPE
DVLHLLPGDG PSVGAPLTAD PRIAGVCFTG STEVARAIER QLAKTAAPDA MLIAETGGLN
AMIVDSTALP EQAVRDILAS AFQSAGQRCS ALRILYIQKD VEARVTAMLR GAMQALTVGD
PWQVPTDVGP VIDDEALSGI SGYCEEMERK GRLLARIERP EGGRFVAPAA FQVSGIEEME
REVFGPVLHV ATFEAEDLGH VISAVNAKGY GLTFGLHTRI DARVQEVVDG IHAGNIYVNR
NQIGAVVGSQ PFGGEGLSGT GPKAGGPHYL RRFRRGKAGP DLAPADAPAI AAEELVRAMP
DAQKSGWADR TDRIVALRRA LRGRWADVLA SAAALDLGPV DLPGPTGEAN TLQLAPRGRV
LCLGADADAL AAQVIQALAA GNAVLAVAKD APAILQPLTR AGFPLAAFHG NVAPQTLETL
ALDLVAATGE RQWLTAVRTA LSAREGRIVP LVTELVYPAA YAHERSVCVD TTAAGGNASL
LAAA