Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_2942 |
Symbol | |
ID | 3681371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 3645529 |
End bp | 3648510 |
Gene Length | 2982 bp |
Protein Length | 993 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637718289 |
Product | L-proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase |
Protein accession | YP_323448 |
Protein GI | 75909152 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0506] Proline dehydrogenase [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | [TIGR01237] delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTATTAC AAGTACAAAC CAGCACCTAC GAAGCAAAAA CTCAAGAAAT TGCTAGACAA TTATTAGGAG CAACTCAAGA AAATCGCTCG TTTTTTGCTT CTTTACGTGA TCAAATGCGT TGGGATGATA AATTACTGGC TTGGGCGATG AGTAATCCCG GTTTACGGGT GCAATTATTT CGGTTTATTG ATACTTTACC CGCATTGCAT AGTAAAGCGG AAATTGCTGC ACATTTACAA GAATATTTAG GGGATGAATC TGTTGAACTT CCTGCCGCTT TAAAGGGAAT GCTCAATTTT GCCAACCCTG ACTCTGTGCC GGGACAAGTG GCTGCAACTA CCGTCTCTAC AGCAGTTGAG ACTTTAGCTC ATAAATATAT TTCTGGGGAA AATATTAAAC AAGTCATCAA GACAGTTGAA CGACTACGAA AAGAAAAAAT GGCCTTCACC ATTGACTTAC TTGGTGAGGC GGTAATTACA GAAACAGAGG CACAATCTTA TCTAGAAAGG TATCTAGAAT TAATTAGCCA ATTAACAGAA GCATCGAAGA ATTGGGGAAC TGTTGGGGCT ATTGATGAAG CAGATGGCGA ACAGCTAGCA AAAGTCCAGG TTTCTGTGAA GTTAACGGCG TTTTATTCCC AATTTGACCC ATTAGATGCT AAAGGTAGTG AGGAGAAAGT TAGCGATCGC ATTCGCATTT TATTACGTCG TGCTAAGGAG TTAGGGGCGG CTATCCATTT TGATATGGAA CAGTATGCTT ATAAAAACTT AACTTTAAAT ATTTTGCAAA AAATCTTATT AGAAGATGAG TTTCGTCAAC GTACAGATAT TGGCATCACA ATTCAAGCAT ACCTAAGAGA TAGTGAGCAA GATGCCAGAA ATGCGATCGC TTGGTTGAAA CAGCGCGGTT ATCCTTTAAC TATTCGCTTG GTAAAAGGGG CTTATTGGGA TCAGGAAACT ATTAAAGCGG CGCAAAAGCA TTGGCCACAG CCTGTTTTTA ATGATAAGGC GGCGACAGAT GCCAATTTTG AGGCGATAAC TCAGTTATTG CTGGAAAATA ACCAGTATGT TTATTCTGCC ATTGGTAGTC ATAATGTGCG ATCGCAAGCT TTGGCTATAG CGATTGCGGA AACTTTGCAG GTTCCCCGGC GGCGGTTTGA GATGCAGGTG CTGTACGGGA TGGGGGATAA GTTAGCGAAG GCTTTGGTTG ATCGGGGTTA TCGGGTGCGG GTTTATTGTC CTTATGGTGA TTTGTTACCG GGGATGGCTT ACCTGATTCG GCGGTTGTTG GAGAATACGG CGAATAGTTC TTTTTTACGG CAAAATTTGG AGAATCGGCC TGTAGAGGAA TTATTGGCGG CTCCAGATAT TAATTTGGCT CACGCAAAGG CGCAGAGAAG CAAAGAGGAG AAGGGTTCTT TTGGGGCGAC GGATACGGAT TTCGCGGTGG AGGAGGAGAG AAAGGAGGCG GCGCGGGCTT TTGCGGAGGT GCGTGGGGCG TTGGGGCGGA GTTATTTACC TCTGATTAAT GGGGAGTATG TGCAGACGGC GGAGGTGATT GATTCTGTTA ATCCTTCTAA TTTTGGTGAG GTGATTGGGA AGGTTGGGTT GATTAGTGTG GAACAGGCGG AACAGGCGAT GCAGGCGGCG AAGGCGGCGT TTCCAGGTTG GCGGCGGACT CCGGTGAAGG AACGGGCGGC GATTTTGCGA CGGGCTGGTG ATTTGTTGGA GGAGCGTCGG GCGGAACTTT CGGCTTGGAT AGTTTTGGAG GTGGGTAAGC CTGTTAAGGA AGCAGATGCA GAGGTTTCGG AGGCGATCGA TTTTTGTCGC TATTACGCTG ATGAGATGGA ACGGCTGTAT CAGGGTATAA ATTATGATGT GGCTGGGGAA ACAAATCGTT ATATTTACCA GCCACGGGGT ATTGTGGTGG TGATTTCTCC TTGGAATTTT CCTTTGGCGA TAGCCTGTGG CATGACTGTT GCTGCTTTGG TTACAGGCAA TTGCACTCTG CTGAAGCCGG CGGAAACTTC TTCTGTGATT ACTGCCAAAT TAACGGAGAT TTTGCTAGAA GCCGGTATAC CTAAAGGTGT ATTTCAATAC GTCCCCGGTA AGGGTTCTCA AGTCGGGGCT TATTTGGTAA GTCATCCTGA TACTCATCTG ATTGCTTTTA CAGGTTCTCA GGAAGTTGGT TGTCGGATTT ATGCTGAAGC AGCTACCCTA AAACCCCAAC AAAGGCACAT GAAGCGGGTA ATTGCGGAAA TGGGCGGGAA GAATGCCATC ATTGTGGATG AAAGTGCTGA TTTAGACCAA GCCGTTATCG GGGTGGTACA GTCAGCTTTT GGTTACAGTG GGCAAAAATG TTCTGCTTGT TCGCGGGTGA TAGTAGTAGA AGCCATTTAT GATGCTTTTA TCCATCGGTT GGTGGAGGCG ACAAAATCTT TAAATATTGG TGAGGCGGAG TTACCAAGTA CTCAAGTCGG CCCGGTGATT GATGCCAATG CCCGCGATCG CATCCGCGAG TATATTGAGA AAGGTAAGGC AGAATCTCAG GTGGCGTTGG AGTTAAGCGC ACCCAACCAC GGCTATTTTG TTGGGCCTGT CATTTTTGGG GAAGTTCCAC CTCATGGCAC AATAGCCCAG CAAGAGATTT TTGGCCCTGT GTTGGCGGTA ATCAAAGCCA AAGATTTTGC CCAAGCCTTA GCCATTGCCA ATGATACCGA CTACGCCTTG ACTGGCGGGC TTTATTCCCG CACACCTTCC CATATTCAAC AAGCCCAGGA AGAGTTTGAA GTGGGTAACT TATATATCAA CCGTAACATT ACAGGGGCGA TCGTTGCGAG ACAACCCTTT GGCGGTTTCA AACTTTCTGG TGTTGGTTCC AAAGCCGGCG GCCCTGACTA TCTCTTGCAA TTCCTAGAAC CACGGACAAT TACAGAAAAC ATTCAGCGCC AAGGTTTTGC ACCAATTGAA GGAGCAGAAT AA
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Protein sequence | MVLQVQTSTY EAKTQEIARQ LLGATQENRS FFASLRDQMR WDDKLLAWAM SNPGLRVQLF RFIDTLPALH SKAEIAAHLQ EYLGDESVEL PAALKGMLNF ANPDSVPGQV AATTVSTAVE TLAHKYISGE NIKQVIKTVE RLRKEKMAFT IDLLGEAVIT ETEAQSYLER YLELISQLTE ASKNWGTVGA IDEADGEQLA KVQVSVKLTA FYSQFDPLDA KGSEEKVSDR IRILLRRAKE LGAAIHFDME QYAYKNLTLN ILQKILLEDE FRQRTDIGIT IQAYLRDSEQ DARNAIAWLK QRGYPLTIRL VKGAYWDQET IKAAQKHWPQ PVFNDKAATD ANFEAITQLL LENNQYVYSA IGSHNVRSQA LAIAIAETLQ VPRRRFEMQV LYGMGDKLAK ALVDRGYRVR VYCPYGDLLP GMAYLIRRLL ENTANSSFLR QNLENRPVEE LLAAPDINLA HAKAQRSKEE KGSFGATDTD FAVEEERKEA ARAFAEVRGA LGRSYLPLIN GEYVQTAEVI DSVNPSNFGE VIGKVGLISV EQAEQAMQAA KAAFPGWRRT PVKERAAILR RAGDLLEERR AELSAWIVLE VGKPVKEADA EVSEAIDFCR YYADEMERLY QGINYDVAGE TNRYIYQPRG IVVVISPWNF PLAIACGMTV AALVTGNCTL LKPAETSSVI TAKLTEILLE AGIPKGVFQY VPGKGSQVGA YLVSHPDTHL IAFTGSQEVG CRIYAEAATL KPQQRHMKRV IAEMGGKNAI IVDESADLDQ AVIGVVQSAF GYSGQKCSAC SRVIVVEAIY DAFIHRLVEA TKSLNIGEAE LPSTQVGPVI DANARDRIRE YIEKGKAESQ VALELSAPNH GYFVGPVIFG EVPPHGTIAQ QEIFGPVLAV IKAKDFAQAL AIANDTDYAL TGGLYSRTPS HIQQAQEEFE VGNLYINRNI TGAIVARQPF GGFKLSGVGS KAGGPDYLLQ FLEPRTITEN IQRQGFAPIE GAE
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