Gene Franean1_3125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3125 
Symbol 
ID5671503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3680460 
End bp3681968 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content68% 
IMG OID641242022 
Productaldehyde dehydrogenase 
Protein accessionYP_001507442 
Protein GI158314934 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGATG TGTGGAGTCT CGACCCGCGA ACCGGACGGC GGGTCCAGTT GGTTGCCGCC 
TCGACATCGG TCTCGGGCGT TGACGCGGCT GCCAAAGCTG CAAAGGGCGC GGCTGGCGAA
CTTGTCCGTT CGGGTCGCGC GACGCGGGCA CTGCTGCTGC GCCGAATCGC CGCGGTCGTT
GAGGAGCGGG CCGACAAGTT GTTGGAGGTC GCTGACCGGG AAACCGCCCT GGGTTCCCCC
CGGTTGCCCG GGGAGCTGGC GCGTACGGCG GGACAGCTAC ACCTGTTCGC CGACATCGTC
GAAGACGGCT CCTACCAGGA GGCGGTGATC ACGGATGCGC GCACGGACGT GGAACCGCCT
GTTCCGGATC TGCGACGGCT ACTCGTCCCG TTGGGGCCGG TTGCGGTCTT CGGAGCCAGC
AACTTCCCCT TCGCGTTCTC GGTGCTCGGC GGCGACACGG CGGCGGCGCT CGCCGCAGGT
TGTCCCGTCG TGGTCAAGTG CCACCCGGGG CACCCGGAGA CGTCGGTGCT GATGCTCGAG
GCGTGGCGTC AGGCCGCTGC TGAAACTGGT GTTCGCGAGG ATGCGGTGCA GTTGGTGTTC
GGTACCGATG CCGGGCGCCA GCTCGTCGAG CACCCGCATA TCCGAGCGGT CAGCTTCACC
GGCTCGCTGG CGGTCGGGCG CGAACTGCAC GACCTGGCCG CCGGACGGCC GGATCCAATA
CCGTTCTACG GCGAGCTCGC CGGGATGAAT CCGCTGATCG TCACGCCCGG TGCGGCCCAG
CAGCGGGCCG AGGAGATCGG CCGGGGAGCG GCAGCATCGT TCACCTTGAA CGGCGGCCAG
TTCTGCACGA AGCCAGGGCT GTTGTTCGTG CCTGCCGGAC CGGACGGTGA CCGGCTGATC
GCCGCTGCAG CAGCATACGT CACCAAGATG ATGCCTGTGG TGATGTTGAC CGCGCAGACG
CGACGCGCCT ACCAGGCCGG ACTCGAGGCA TTGCTATCCC ACCCTCGTGT TACGGCAGTG
GCGCGGGTCG CTGACCCCGC CGGCGGGACA TTGGACCCCG ACTACGAGGG TAGCTGCCTG
GCCACGCCCG CGCTCCTGGA GCTGTCGTCG AGTGATCTCG ACCGGTCGGT GCTGCAAGAG
TGCTTCGGCC CGGTCGCGGT CGTCGCCCGG TACGAGTCGA CGTCAAGGAT GATCGACGGT
CTTGCCGACC TGGAGGGGGC GCTCGCGGCG GCCGTGCACA GCACCAAGGA TGAGACAGAG
CTGACCGCTG CGATCACTGA GGCGGTGCTC CCCAAGGTCG GCCGCATCGT CTACAACGGT
TATCCCACGG GAGTCGCGGT CACGGCAGCC ATGACTCACG GTGGACCCTG GCCCGCGACC
AGCAACGCGC TACACAGCTC GGTCGGCCCA TCGGCGATTC GGCGGTTCCT CCGGCCCGTC
ACCTATCAGA ACGCACCCCA GGGCATCGTC CCTGAAGAAC TCCGCGGCCG GATCGGTAGC
AGGAGGTGA
 
Protein sequence
MSDVWSLDPR TGRRVQLVAA STSVSGVDAA AKAAKGAAGE LVRSGRATRA LLLRRIAAVV 
EERADKLLEV ADRETALGSP RLPGELARTA GQLHLFADIV EDGSYQEAVI TDARTDVEPP
VPDLRRLLVP LGPVAVFGAS NFPFAFSVLG GDTAAALAAG CPVVVKCHPG HPETSVLMLE
AWRQAAAETG VREDAVQLVF GTDAGRQLVE HPHIRAVSFT GSLAVGRELH DLAAGRPDPI
PFYGELAGMN PLIVTPGAAQ QRAEEIGRGA AASFTLNGGQ FCTKPGLLFV PAGPDGDRLI
AAAAAYVTKM MPVVMLTAQT RRAYQAGLEA LLSHPRVTAV ARVADPAGGT LDPDYEGSCL
ATPALLELSS SDLDRSVLQE CFGPVAVVAR YESTSRMIDG LADLEGALAA AVHSTKDETE
LTAAITEAVL PKVGRIVYNG YPTGVAVTAA MTHGGPWPAT SNALHSSVGP SAIRRFLRPV
TYQNAPQGIV PEELRGRIGS RR