| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A0470 |
|---|
| Symbol | |
|---|
| ID | 4005947 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | + |
|---|
| Start bp | 4368451 |
|---|
| End bp | 4370151 |
|---|
| Gene Length | 1701 bp |
|---|
| Protein Length | 566 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637949166 |
|---|
| Product | phenylacetic acid ring-opening protein (PaaZ') |
|---|
| Protein accession | YP_560515 |
|---|
| Protein GI | 91785309 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | [TIGR02288] phenylacetic acid degradation protein paaN |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0566882 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACATC CGCTATTCAC CAAACACGAA GACACGCTGC AAAAGGCACT CGCCGCGATC
GAAACGCGCG GCTACTGGAG CCCGTTCGTC GAAATGCCCA GTCCGAAAGT GTACGGGGAA
ACAGCTAACG CAGACGGCGA AGCCGCATTC AAAGCGCATC TCAACACGAC GTTCCAGCTG
GACCAACCGT CGACGGGCGA AACTGTCGGT GCCGAAGTCT CGCCGTTCGG ATTCCCGCTC
GGCGTGCGCT ACCCGAAATC CGCCCCCACC GCACTGATCG CGGCGGCCGC CGTTGCCCAG
CGTGACTGGC GTGCGGCTGG TCCGCAGGCA TGGATCGGCG TGTGCCTCGA GATTCTTGCC
CGCGTGAATC GCGCCAGCTT CGAAATTGGT TACAGCGTGA TGCACACAAC CGGTCAGGCG
TTCATGATGG CCTTCCAGGC CGGCGGCCCG CACGCACAAG ACCGCGCACT GGAAGCCGTC
GCGTACGCGT GGGACCAATT GCGCCGCATT CCCGGCGACG CCCACTGGGA AAAGCCGCAA
GGCAAGAATC CGCCGCTCGC CATGCACAAG CATTACACCG TCGTGCCGCG CGGCACCGGC
CTGGTACTCG GCTGCTGCAC CTTCCCGACG TGGAACGGCT ATCCGGGCCT CTTCGCCGAC
CTGGCCACAG GCAACACGGT CATCGTCAAG CCGCATCCGG GCGCAATCCT GCCGCTCGCC
CTGACTGTAC GCATTGCGCG CGATGTTCTG CGCGAAGCGG GTTTCGATCC GAACGTCATC
ACCTTGCTGG CCACCGAACC GAATGACGGC GCGCTCGTCC AGGAGCTGGC CCTGCGCCCG
GAAATCAAGC TCATCGACTT CACGGGCAGC ACGCAAAACG GCACGTGGCT CGAACGCAAT
GCGCACCAGG CGCAGGTTTA CACCGAAAAA GCCGGCGTGA ACCAGATCGT GATCGACTCG
GTGGACGACA TCAAAGCCGT TGCCCGCAAT ATCGCCTTCT CGCTCGCGCT GTACTCGGGC
CAGATGTGCA CCGCGCCGCA AAACATCTAT GTGCCGCGCG GCGGTATCCG CACCGCGGAA
GGCACGCTCG GGTTTGACGA AGTCGCTCAA GCCATTGCCG CCGCCGTGCA AAAACTCGTC
TCCGACCCGG CCCGCGCGGT CGAAATACTC GGCGCGATTC AGAACGAAGG TGTGGCGCAA
CGCATTGAGG AAGCCGCAAA ATCCGGTCGG GTTCTCGTCG AGAGCCAGAC GCTCGAGCAT
CCCGCTTTTG CGGGCGCCCG CGTGCGCACG CCGCTCGTGG TTCAGCTGGA TGCCGCGACC
GACTACGCGC AGTTCACCAA AGAATGGTTC GGCCCGATCT CTTTCGTGAT CGCGACGGAC
TCGACTGCGC AGTCGCTCGA CCTCGCCGGC GCAATCGCTG CCGAACATGG CGCACTGACG
TTGTCGGTCT ATAGCACGGA CGAAGCGGTG CTCGAACAGG CGCACGAAGC ATCCATTCGT
GGTGGCGTGG CCTTGTCGAT CAATCTGACG GGCGGTGTAT TCGTCAATCA GTCGGCGGCC
TTTTCGGACT TCCACGGCAC GGGCGCGAAT CCGGCAGCCA ATGCCGCGCT GGCCGACGCG
GCCTTCGTTG CGAATCGCTT CCGCGTAGTT CAAAGCCGCG TTCATGTTGA ACCGAAAGCG
GCGCCGGCGG TAGCTGGCTG A
|
|---|
| Protein sequence | MTHPLFTKHE DTLQKALAAI ETRGYWSPFV EMPSPKVYGE TANADGEAAF KAHLNTTFQL
DQPSTGETVG AEVSPFGFPL GVRYPKSAPT ALIAAAAVAQ RDWRAAGPQA WIGVCLEILA
RVNRASFEIG YSVMHTTGQA FMMAFQAGGP HAQDRALEAV AYAWDQLRRI PGDAHWEKPQ
GKNPPLAMHK HYTVVPRGTG LVLGCCTFPT WNGYPGLFAD LATGNTVIVK PHPGAILPLA
LTVRIARDVL REAGFDPNVI TLLATEPNDG ALVQELALRP EIKLIDFTGS TQNGTWLERN
AHQAQVYTEK AGVNQIVIDS VDDIKAVARN IAFSLALYSG QMCTAPQNIY VPRGGIRTAE
GTLGFDEVAQ AIAAAVQKLV SDPARAVEIL GAIQNEGVAQ RIEEAAKSGR VLVESQTLEH
PAFAGARVRT PLVVQLDAAT DYAQFTKEWF GPISFVIATD STAQSLDLAG AIAAEHGALT
LSVYSTDEAV LEQAHEASIR GGVALSINLT GGVFVNQSAA FSDFHGTGAN PAANAALADA
AFVANRFRVV QSRVHVEPKA APAVAG
|
|---|
| |