| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_2562 |
|---|
| Symbol | |
|---|
| ID | 4092563 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008060 |
|---|
| Strand | + |
|---|
| Start bp | 2818873 |
|---|
| End bp | 2820579 |
|---|
| Gene Length | 1707 bp |
|---|
| Protein Length | 568 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638015848 |
|---|
| Product | phenylacetic acid degradation protein paaN2 |
|---|
| Protein accession | YP_622434 |
|---|
| Protein GI | 107024107 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | [TIGR02288] phenylacetic acid degradation protein paaN |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.945881 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCACG CACTGTTCAC GAAGCACGAA GACACGCTGA AACACGCACT CGCCGCCATC
GAGAGCCGCG GGTACTGGAG CCCGTTCGCC GAAATGCCGA GCCCCAAAGT GTACGGGGAA
AGCGCCAGCG CGGACGGTGA GGCCGCGTTC AAGTCACACC TCGACAAGAC CTTCGTGCTC
GACCAGCCGG CGACCGGTGA AACGGTCGGC GCCGAGCGCT CGCCGTACGG CATCGCGCTG
GGCGTCCGGT ACCCGAAATC GGCGCCCGAC GCACTGATCG CTGCTGCCGC CGCCGCGCAA
CGCACGTGGC GCGAAGCCGG CCCGAGCGCA TGGGTCGGCG TCAGCCTCGA AATCCTCGCG
CGCCTGAACC GTGCAAGCTT CGAAATTGCC TACAGCGTGA TGCACACCAC CGGGCAAGCC
TTCATGATGG CGTTTCAGGC CGGCGGCCCG CACGCGCAGG ACCGCGCCCT CGAGGCGGTC
GCCTATGCGT GGGACGAACT GCGCCGCATC CCGGCCGATG CGCACTGGGA AAAACCGCAA
GGCAAGAACC CGCCGCTCGC GATGCACAAG CGCTACACGA TCGTGCCGCG CGGCACGGGC
CTCGTGCTCG GCTGCTGCAC GTTCCCGACC TGGAACGGCT ACCCGGGCCT GTTCGCCGAC
CTGGCAACCG GTAATACCGT GATCGTCAAA CCGCACCCCG GCGCGATCCT GCCGCTCGCC
ATCACGGTGC GGATCGCCCG CGACGTGCTG CGCGAAGCCG GGTTCGATCC GAACGTCGTC
ACGCTCCTCG CGACCGAACC CAACGACGGC GCCCTCGTCC AGGACCTCGC GCTGCGCCCC
GAGATCAAGC TGATCGACTT CACCGGCAGC ACGCAGAACG GCACGTGGCT CGAACGCCAT
GCCCACCAGG CACAGGTCTA TACCGAGAAA GCCGGCGTCA ACCAGATCGT GATCGACTCG
ACCGACGACC TGAAGGCCGC CGCCAAGAAC ATCGCGTTCT CGCTGGCGCT GTACTCCGGC
CAGATGTGCA CGGCACCGCA GAACATCTAC GTGCCACGCG GCGGCATCCG GACGACCGAC
GGCCATGCGA GCTTCGACGA AGTCGCGCAG GCGATCGCGG TTGCCGTGCA AAAACTCACC
GGCGATCCAG CTCGCTCGGT CGAACTGATC GGTGCGATCC AGAATGAAGG CGTGACTGCG
CGCATCGACG ACGCGCGCAA GCTCGGCCGC GTACTCGCGG ACAGCGTGAC GCTCCAGCAT
CCCGCCTTCC CCGATGCGCG CGTGCGTACG CCGCTCGTGC TGCAACTCGA CGTGGCCGAC
CGAGAGAAAT TCACCCAGGA GTGGTTCGGC CCGATCTCGT TCGTGATCGC GACCGACTCG
ACCGCGCAGT CGCTCGATCT CGCCGGTGAA ATCGCAGCCG AGCATGGCGC ACTGACCCTC
TCCGTCTACA GCACGGACGA CGCAATCGTC GACGCCGCAC ACGACGCGGC AGTGCGTGGC
GGCGTCGCGC TGTCGATCAA CCTCACGGGC GGCGTATTCG TCAACCAGTC GGCCGCGTTC
TCCGACTTCC ACGGCACGGG CGCGAACCCG GCAGCCAACG CAGCGCTGGC CGACCCGGCA
TTCGTCGCCA ACCGGTTCCG CGTGGTGCAA AGCCGCGTCC ATGTTGCCCC GAAGGCGGCA
CCCGCGGAAG CTGGCCAGAC GGCATAA
|
|---|
| Protein sequence | MTHALFTKHE DTLKHALAAI ESRGYWSPFA EMPSPKVYGE SASADGEAAF KSHLDKTFVL
DQPATGETVG AERSPYGIAL GVRYPKSAPD ALIAAAAAAQ RTWREAGPSA WVGVSLEILA
RLNRASFEIA YSVMHTTGQA FMMAFQAGGP HAQDRALEAV AYAWDELRRI PADAHWEKPQ
GKNPPLAMHK RYTIVPRGTG LVLGCCTFPT WNGYPGLFAD LATGNTVIVK PHPGAILPLA
ITVRIARDVL REAGFDPNVV TLLATEPNDG ALVQDLALRP EIKLIDFTGS TQNGTWLERH
AHQAQVYTEK AGVNQIVIDS TDDLKAAAKN IAFSLALYSG QMCTAPQNIY VPRGGIRTTD
GHASFDEVAQ AIAVAVQKLT GDPARSVELI GAIQNEGVTA RIDDARKLGR VLADSVTLQH
PAFPDARVRT PLVLQLDVAD REKFTQEWFG PISFVIATDS TAQSLDLAGE IAAEHGALTL
SVYSTDDAIV DAAHDAAVRG GVALSINLTG GVFVNQSAAF SDFHGTGANP AANAALADPA
FVANRFRVVQ SRVHVAPKAA PAEAGQTA
|
|---|
| |