Gene Noc_1705 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1705 
Symbol 
ID3704627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1907764 
End bp1910898 
Gene Length3135 bp 
Protein Length1044 aa 
Translation table11 
GC content54% 
IMG OID637738186 
Productbifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 
Protein accessionYP_343707 
Protein GI77165182 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0506] Proline dehydrogenase
[COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase 
TIGRFAM ID[TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTCATGA TTTCGGATAT TGAACTACCC TCTCTAGATT CGCCACGGGC TGCGATTAGT 
GCGGCCTATC TCGCTGATGA AACAGTCTGG GTAAAGTCCT TATTACGTGA GACGGAGTTG
GCTCCTGAAG TTAATGAGCG TGTGAAGCGG CGGGCAAGCC AATGGGTACA GTTAGTGCGC
GAGAAACGCC GCTGGCATGG AGGTTTGGAT GCTTTTCTCC ATGAATACAA CCTTTCAAGC
CAGGAAGGGG TGGTTCTCAT GTGCCTGGCC GAGGCCCTGT TGCGAATCCC TGATGATGAG
AATGCGGATC GGCTTATCCA TGACAAACTC CTCAAGGGTG AATGGGATAG GCATCTTGGG
CATAGTCATT CGCTCTTTGT GAATGCGTCT ACCTGGGGAT TAATGCTCAC TGGGCGTCTG
ATGCGCCTGG AAACACCGTT AATCGATGAT GGCAAGGGTG TGATTAAGCG CCTAGTAAAG
CGTGGCGGGG AGCCTTTGGT GCGCTTAGCG CTCCGGCAAG CGATGCGCAT TATTGGGGGT
CAATTTATCA TGGCGCCTAG AATTGAACAG GCTTTGACAC AATGCCGTGA AAATGAGCGT
TACTCTTTCG ATATGCTAGG TGAAGTCGCC CTGACCCAGG CCCGGGTCGA GCAATACTAT
AGTGGCTATC GGCATGCAAT TAGGGTGCTA GGGGAGACAG ATTCAGGCGA GCATAATCGG
GAAGCAACAG GAATTTCGGT CAAGCTCTCG GCGCTTCATC CCCGTTACAC GTTTTCCCAG
CGAAGGAGAG TGCAAGCGGA GCTAGTTCCC CGGGTATTGG CATTAGCCCG TGAAGCCTGC
GCCGCCGACA TTGGGCTTAC ACTAGATGCA GAGGAAGCGG ATCGTTTAGA GTTGATGCTC
GATGTTTTTG AGGCGGTATT CCGCGATCCT TCCTTGAGGA GATGGCAAGG GTTTGGGCTA
GCACTGCAAG CCTACCAAAA GCGGGCGCTG CCTGTCTTGA ATTATTTGCG GGATCTTGCC
CAGAAAGAAG GCCGGTGTAT TCCGGTACGG TTGGTGAAAG GTGCCTATTG GGATACGGAA
ATCAAACGTG CCCAGGAACA GGGACTGGCC GGTTATCCAG TTTTTACCCG GAAGGTCAAT
ACGGATGTTT CTTTTCTTGC CCTAGCTCGC CGCCTACTCA GTGCCCGCGA TGTGTTCTAC
CCTCAATTTG CCTCCCATAA TGCTCATACC GTGGCTTGGG TGCTGGAAAC AGCAGGAGAG
CAGCAAGGCT TTGAATTCCA ACGCTTGTAT GGTATGGGGG AATTGCTATA TAGCGCCTTG
CGGGAACAGG GAATTAGCGT TCCCTGTCGA GTCTATGCGC CGGTGGGAGG ATATGCTGAT
CTGCTGCCTT ATTTAGTGCG TCGCTTGCTG GAAAATGGTG CTAACACTTC TTTTGTCAAC
CGGATTGAGG ACGAAGAGGT GCCTATCGAA CAAATAGTGG CGGACCCTTC TGAGTATGTT
CGTAGCTTGC CCTCTAAATC CCATCCTAAT ATCCCTTTGC CTCTTCGGCT TTATGGAAAA
GTGCGGCGCA ATTCCTTAGG GATTAATCTG AATGATCCCA CTAGCTTGGA GCGTTTAATG
GCCGAGCTTG GCAGGGCTAT GGAGAAGCAA AGGCAAGCTT TGCCTTTGGT GAGCGGCGAA
GCCGGCAAGG GGACAGTCCA AGTAGTGCGG GACCCTAGCG ATCGGCGGCG GGTGCTGGGT
ACCGTAGTAG AAGCCGATCA AGAGGCTATC GCCGAGGCTC TTTCGGAAGC GGATGCTGTT
GCAGCGGGTT GGGAAGCTAC CTCTGTTTTG GGGCGAGCTG AGTGTTTAGA GCAGGCGGCT
GATTTATTCG AGGAGCGTCA AGTTGAGTTG ATGGCTCTAT GTATTCGTGA AGGAGGGAAA
ACTGTTGCGG ATTCGCTTGC CGAAGTGCGG GAAGCGGTAG ATGCTTGTCG CTATTATGCT
GCCGAAGCCC GTCGGCTTTT TGCGATGCCT AAGATGCTGC CAGGACCCAC CGGCGAGCAT
AATGAGCTGA CTCTTCACGG ACGCGGCGTG TTTGTTTGCA TTAGTCCTTG GAATTTTCCT
CTGGCTATCT TTACGGGCCA GGTAGCGGCT GCGCTGGTAG CGGGCAATAC AGTGATTGCA
AAGCCCGCGG GGCAGACACC CTTGATAGCG GCATTGGTGG TGCAGTGGTT CCATGAGGCG
GGAATTCCGC CTCGGGTTTT GCACTTTCTC CCTGGCAGAG GTTCAAGGGT AGGTCAGGCG
TTAGTGGCCG ATTACCGTAT CAGCGGGGTT GCCTTTACGG GCTCAACCAG GACCGCTGCT
GTTATTAACC AAGTGCTGGC GGAACGCAAA GGGCCTATCG TGCCACTTAT CGCCGAAACC
GGCGGCCAGA ATGCCATGAT CGTGGATAGT TCCGCGCTGC CAGAGCAAGT GGTGGTGGAT
GTCATGACGT CGGCTTTTAA TAGTGCCGGC CAACGCTGTT CGGCGCTGCG GGTGTTGTTT
CTTCAGGAAG AGGTTGCCGA GCCTATATTG GAAATGCTCA TCGGCGCGAT GGAGGAATTG
AGGCTGGGGG AGCCGGGACG GCTGGATACC GATATAGGAC CGCTTATCGA TGGGGAGGCA
AGGGCGCGTT TGGAAACCCA CTGCCAGCGC ATGAATCGAG AGGCGCGCTT GTTGTGCCGT
TTATCCTTGC CTGAAGCTAC CCAAAACGGC TACTATTTCG CACCCCGAGT CTACGAATTA
GAAAATTTGG CGGAACTTAC CTATGAGGTT TTTGGCCCTG TCTTGCATGT TATCCGCTAT
TCATCCAAGC ACCTCAATAA GGTGATTGCC TCTATCAACC GAACTGGATA CGGCCTAACT
TTGGGAATTC ATAGCCGCGT GGATGAAACA GTGCGTTACA TTCAGAACCG GGTTCATGCA
GGCAATATCT ATGTCAATCG CAATATGATC GGTGCTGTAG TGGGCGTGCA ACCCTTTGGA
GGTGAGAGGC TTTCGGGAAC CGGCCCAAAG GCCGGTGGTC CCCATTATTT ATTGCGCTTT
GCCACCGAGC GTTCAACCAG CATCAATATG GCTGCGGTGG GGGGGAATAC CGATCTCCTG
TCATTGGGGG AGTAA
 
Protein sequence
MVMISDIELP SLDSPRAAIS AAYLADETVW VKSLLRETEL APEVNERVKR RASQWVQLVR 
EKRRWHGGLD AFLHEYNLSS QEGVVLMCLA EALLRIPDDE NADRLIHDKL LKGEWDRHLG
HSHSLFVNAS TWGLMLTGRL MRLETPLIDD GKGVIKRLVK RGGEPLVRLA LRQAMRIIGG
QFIMAPRIEQ ALTQCRENER YSFDMLGEVA LTQARVEQYY SGYRHAIRVL GETDSGEHNR
EATGISVKLS ALHPRYTFSQ RRRVQAELVP RVLALAREAC AADIGLTLDA EEADRLELML
DVFEAVFRDP SLRRWQGFGL ALQAYQKRAL PVLNYLRDLA QKEGRCIPVR LVKGAYWDTE
IKRAQEQGLA GYPVFTRKVN TDVSFLALAR RLLSARDVFY PQFASHNAHT VAWVLETAGE
QQGFEFQRLY GMGELLYSAL REQGISVPCR VYAPVGGYAD LLPYLVRRLL ENGANTSFVN
RIEDEEVPIE QIVADPSEYV RSLPSKSHPN IPLPLRLYGK VRRNSLGINL NDPTSLERLM
AELGRAMEKQ RQALPLVSGE AGKGTVQVVR DPSDRRRVLG TVVEADQEAI AEALSEADAV
AAGWEATSVL GRAECLEQAA DLFEERQVEL MALCIREGGK TVADSLAEVR EAVDACRYYA
AEARRLFAMP KMLPGPTGEH NELTLHGRGV FVCISPWNFP LAIFTGQVAA ALVAGNTVIA
KPAGQTPLIA ALVVQWFHEA GIPPRVLHFL PGRGSRVGQA LVADYRISGV AFTGSTRTAA
VINQVLAERK GPIVPLIAET GGQNAMIVDS SALPEQVVVD VMTSAFNSAG QRCSALRVLF
LQEEVAEPIL EMLIGAMEEL RLGEPGRLDT DIGPLIDGEA RARLETHCQR MNREARLLCR
LSLPEATQNG YYFAPRVYEL ENLAELTYEV FGPVLHVIRY SSKHLNKVIA SINRTGYGLT
LGIHSRVDET VRYIQNRVHA GNIYVNRNMI GAVVGVQPFG GERLSGTGPK AGGPHYLLRF
ATERSTSINM AAVGGNTDLL SLGE